AT3G13228 : -
Query Information
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AGICode AT3G13228
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G13228 RING/U-box superfamily protein 1 0.31 -0.33
2 AT2G07200 Cysteine proteinases superfamily protein 0.65 0.31 -0.31
3 AT3G05170 Phosphoglycerate mutase family protein 0.58 0.3 -0.34
4 AT5G46710 PLATZ transcription factor family protein -0.55 0.3 -0.31
5 AT1G68840 related to ABI3/VP1 2 AtRAV2, ETHYLENE RESPONSE DNA
BINDING FACTOR 2, RELATED TO AP2
8, related to ABI3/VP1 2,
TEMPRANILLO 2		 -0.51 0.31 -0.3
6 AT4G07400 VIER F-box proteine 3 VIER F-box proteine 3 -0.51 0.31 -0.32
7 AT2G04840 Protein of unknown function (DUF295) -0.51 0.29 -0.29
8 AT4G36730 G-box binding factor 1 G-box binding factor 1 -0.5 0.32 -0.34
9 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 -0.5 0.31 -0.3
10 AT1G72950 Disease resistance protein (TIR-NBS class) -0.49 0.31 -0.3
11 AT1G51730 Ubiquitin-conjugating enzyme family protein -0.49 0.31 -0.32
12 AT2G45320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 10 growth stages; Has 45 Blast hits to 45 proteins
in 16 species: Archae - 0; Bacteria - 8; Metazoa - 0; Fungi
- 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.49 0.31 -0.31
13 AT5G35010 transposable element gene -0.49 0.32 -0.29
14 AT1G11960 ERD (early-responsive to dehydration stress) family protein -0.48 0.31 -0.32
15 AT1G43980 Tetratricopeptide repeat (TPR)-like superfamily protein -0.48 0.3 -0.32
16 AT5G18360 Disease resistance protein (TIR-NBS-LRR class) family 0.47 0.31 -0.29
17 AT5G52620 F-box associated ubiquitination effector family protein -0.46 0.33 -0.32
18 AT2G17170 Protein kinase superfamily protein 0.46 0.31 -0.32
19 AT1G43590 transposable element gene -0.45 0.31 -0.32
20 AT4G08820 transposable element gene 0.45 0.31 -0.32
21 AT3G25600 Calcium-binding EF-hand family protein -0.44 0.33 -0.32
22 AT3G54070 Ankyrin repeat family protein -0.44 0.32 -0.33
23 AT3G31460 transposable element gene -0.44 0.32 -0.32
24 AT3G10560 Cytochrome P450 superfamily protein CYTOCHROME P450, FAMILY 77,
SUBFAMILY A, POLYPEPTIDE 7,
UNFERTILIZED EMBRYO SAC 9		 0.43 0.3 -0.32
25 AT1G55560 SKU5 similar 14 SKU5 similar 14 0.42 0.3 -0.32
26 AT5G50450 HCP-like superfamily protein with MYND-type zinc finger -0.41 0.31 -0.31
27 AT4G12740 HhH-GPD base excision DNA repair family protein 0.4 0.3 -0.35
28 AT3G28980 Protein of unknown function (DUF1216) -0.39 0.31 -0.33
29 AT1G04360 RING/U-box superfamily protein -0.39 0.32 -0.3
30 AT1G54550 F-box and associated interaction domains-containing protein -0.39 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
31 C0075 dGDP - dGDP purine nucleotide metabolism (phosphotransfer and nucleotide modification) 0.66 0.44 -0.44 C0075
32 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		0.65 0.45 -0.47 C0091
33 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.63 0.46 -0.45 C0053