AT3G18480 : CCAAT-displacement protein alternatively spliced product.....
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AGICode AT3G18480
Description CCAAT-displacement protein alternatively spliced product
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G18480 CCAAT-displacement protein alternatively spliced product CCAAT-displacement protein
alternatively spliced product,
CCAAT-displacement protein
alternatively spliced product
1 0.31 -0.31
2 AT5G35700 fimbrin-like protein 2 fimbrin-like protein 2, FIMBRIN5 0.72 0.32 -0.33
3 AT4G08180 OSBP(oxysterol binding protein)-related protein 1C OSBP(oxysterol binding
protein)-related protein 1C
0.72 0.32 -0.31
4 AT5G58270 ABC transporter of the mitochondrion 3 ATP-binding cassette B25,
ARABIDOPSIS THALIANA ABC
TRANSPORTER OF THE MITOCHONDRION
3, ABC transporter of the
mitochondrion 3, STARIK 1
0.72 0.33 -0.32
5 AT5G13560 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast
hits to 8846 proteins in 811 species: Archae - 217;
Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants -
528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI
BLink).
0.71 0.36 -0.32
6 AT3G05090 Transducin/WD40 repeat-like superfamily protein LATERAL ROOT STIMULATOR 1 0.7 0.32 -0.32
7 AT5G15800 K-box region and MADS-box transcription factor family
protein
AGAMOUS-like 2, SEPALLATA1 0.69 0.32 -0.3
8 AT3G27700 zinc finger (CCCH-type) family protein / RNA recognition
motif (RRM)-containing protein
0.69 0.33 -0.31
9 AT5G15400 U-box domain-containing protein 0.69 0.29 -0.32
10 AT4G11160 Translation initiation factor 2, small GTP-binding protein 0.68 0.33 -0.31
11 AT3G03510 Phototropic-responsive NPH3 family protein 0.67 0.29 -0.33
12 AT4G21180 DnaJ / Sec63 Brl domains-containing protein ATERDJ2B 0.66 0.31 -0.33
13 AT5G41330 BTB/POZ domain with WD40/YVTN repeat-like protein 0.65 0.3 -0.31
14 AT1G60070 Adaptor protein complex AP-1, gamma subunit 0.65 0.33 -0.33
15 AT1G26110 decapping 5 decapping 5 0.65 0.32 -0.3
16 AT3G24180 Beta-glucosidase, GBA2 type family protein 0.65 0.31 -0.32
17 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120
0.65 0.29 -0.32
18 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.64 0.34 -0.31
19 AT2G47150 NAD(P)-binding Rossmann-fold superfamily protein 0.64 0.32 -0.32
20 AT5G61140 U5 small nuclear ribonucleoprotein helicase 0.64 0.32 -0.31
21 AT4G35890 winged-helix DNA-binding transcription factor family
protein
0.64 0.34 -0.34
22 AT1G43900 Protein phosphatase 2C family protein 0.64 0.3 -0.35
23 AT1G12470 zinc ion binding 0.63 0.33 -0.3
24 AT1G54840 HSP20-like chaperones superfamily protein -0.63 0.33 -0.34
25 AT3G50590 Transducin/WD40 repeat-like superfamily protein 0.63 0.32 -0.34
26 AT5G57260 cytochrome P450, family 71, subfamily B, polypeptide 10 cytochrome P450, family 71,
subfamily B, polypeptide 10
-0.63 0.33 -0.32
27 AT4G13780 methionine--tRNA ligase, putative / methionyl-tRNA
synthetase, putative / MetRS, putative
0.63 0.32 -0.31
28 AT5G52580 RabGAP/TBC domain-containing protein 0.63 0.3 -0.3
29 AT1G05520 Sec23/Sec24 protein transport family protein 0.63 0.32 -0.32
30 AT1G77300 histone methyltransferases(H3-K4 specific);histone
methyltransferases(H3-K36 specific)
ASH1 HOMOLOG 2, CAROTENOID
CHLOROPLAST REGULATORY1, EARLY
FLOWERING IN SHORT DAYS, LAZARUS
2, SET DOMAIN GROUP 8
0.63 0.33 -0.33
31 AT4G39160 Homeodomain-like superfamily protein 0.62 0.33 -0.31
32 AT1G60350 NAC domain containing protein 24 NAC domain containing protein 24,
NAC domain containing protein 24
-0.62 0.31 -0.31
33 AT4G32640 Sec23/Sec24 protein transport family protein 0.62 0.33 -0.31
34 AT2G01150 RING-H2 finger protein 2B RING-H2 finger protein 2B -0.62 0.32 -0.3
35 AT3G04800 translocase inner membrane subunit 23-3 translocase inner membrane subunit
23-3, translocase inner membrane
subunit 23-3
-0.62 0.3 -0.31
36 AT2G38130 Acyl-CoA N-acyltransferases (NAT) superfamily protein ATMAK3 0.62 0.33 -0.31
37 AT4G40050 Protein of unknown function (DUF3550/UPF0682) 0.62 0.31 -0.31
38 AT2G18960 H(+)-ATPase 1 H(+)-ATPase 1, H(+)-ATPase 1, OPEN
STOMATA 2, PLASMA MEMBRANE PROTON
ATPASE
0.62 0.33 -0.32
39 AT4G18890 BES1/BZR1 homolog 3 BES1/BZR1 homolog 3 0.61 0.34 -0.31
40 AT5G51320 transposable element gene -0.61 0.3 -0.32
41 AT2G13560 NAD-dependent malic enzyme 1 NAD-dependent malic enzyme 1 0.61 0.32 -0.33
42 AT4G16447 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).
-0.61 0.31 -0.31
43 AT3G27410 unknown protein; Has 10 Blast hits to 10 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.61 0.29 -0.32
44 AT4G32180 pantothenate kinase 2 pantothenate kinase 2,
pantothenate kinase 2
0.61 0.32 -0.33
45 AT4G04630 Protein of unknown function, DUF584 -0.61 0.32 -0.3
46 AT1G07160 Protein phosphatase 2C family protein 0.61 0.33 -0.29
47 AT3G59910 Ankyrin repeat family protein 0.6 0.31 -0.31
48 AT5G56290 peroxin 5 ARABIDOPSIS PEROXIN 5, EMBRYO
DEFECTIVE 2790, peroxin 5
0.6 0.31 -0.3
49 AT3G58740 citrate synthase 1 citrate synthase 1 0.6 0.33 -0.33
50 AT4G00940 Dof-type zinc finger DNA-binding family protein -0.6 0.31 -0.34
51 AT1G33760 Integrase-type DNA-binding superfamily protein -0.6 0.28 -0.32
52 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.6 0.32 -0.31
53 AT4G27220 NB-ARC domain-containing disease resistance protein 0.6 0.35 -0.34
54 AT1G67880 beta-1,4-N-acetylglucosaminyltransferase family protein -0.59 0.32 -0.32
55 AT2G19630 F-box and associated interaction domains-containing protein 0.59 0.32 -0.31
56 AT2G20790 clathrin adaptor complexes medium subunit family protein 0.59 0.3 -0.32
57 AT5G62990 Ubiquitin carboxyl-terminal hydrolase family protein embryo defective 1692 0.59 0.32 -0.31
58 AT3G02280 Flavodoxin family protein 0.59 0.3 -0.3
59 AT5G19490 Histone superfamily protein -0.59 0.33 -0.31
60 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).
0.59 0.32 -0.32
61 AT2G17660 RPM1-interacting protein 4 (RIN4) family protein -0.59 0.32 -0.34
62 AT2G46400 WRKY DNA-binding protein 46 WRKY DNA-BINDING PROTEIN 46, WRKY
DNA-binding protein 46
-0.58 0.31 -0.32
63 AT3G15430 Regulator of chromosome condensation (RCC1) family protein 0.58 0.33 -0.29
64 AT4G25470 C-repeat/DRE binding factor 2 ATCBF2, C-repeat/DRE binding
factor 2, DRE/CRT-BINDING PROTEIN
1C, FREEZING TOLERANCE QTL 4
-0.58 0.32 -0.31
65 AT1G53080 Legume lectin family protein -0.58 0.31 -0.3
66 AT2G23900 Pectin lyase-like superfamily protein -0.57 0.32 -0.33
67 AT1G76900 tubby like protein 1 tubby like protein 1, tubby like
protein 1
-0.57 0.29 -0.32
68 AT4G19650 Mitochondrial transcription termination factor family
protein
-0.57 0.32 -0.31
69 AT3G14640 cytochrome P450, family 72, subfamily A, polypeptide 10 cytochrome P450, family 72,
subfamily A, polypeptide 10
0.57 0.33 -0.33
70 AT5G15581 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: leaf apex; Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).
-0.57 0.33 -0.33
71 AT3G12380 actin-related protein 5 actin-related protein 5,
ACTIN-RELATED PROTEIN 5
0.57 0.31 -0.32
72 AT2G30470 high-level expression of sugar-inducible gene 2 high-level expression of
sugar-inducible gene 2,
VP1/ABI3-LIKE 1
0.57 0.31 -0.32
73 AT4G34110 poly(A) binding protein 2 ARABIDOPSIS POLY(A) BINDING 2,
poly(A) binding protein 2, POLY(A)
BINDING PROTEIN 2
0.57 0.34 -0.32
74 AT2G46190 Mitochondrial glycoprotein family protein -0.56 0.33 -0.3
75 AT2G17950 Homeodomain-like superfamily protein PGA6, WUSCHEL, WUSCHEL 1 -0.56 0.32 -0.33
76 AT5G52140 RING/U-box superfamily protein -0.56 0.31 -0.32
77 AT5G18560 Integrase-type DNA-binding superfamily protein PUCHI -0.56 0.33 -0.31
78 AT1G21220 transposable element gene -0.55 0.3 -0.32
79 AT3G11600 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 12 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in
15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.55 0.32 -0.32
80 AT1G12610 Integrase-type DNA-binding superfamily protein DWARF AND DELAYED FLOWERING 1 -0.55 0.31 -0.33
81 AT5G52760 Copper transport protein family -0.55 0.31 -0.31
82 AT1G01120 3-ketoacyl-CoA synthase 1 3-ketoacyl-CoA synthase 1 -0.55 0.31 -0.34
83 AT2G20620 Protein of unknown function (DUF626) -0.54 0.33 -0.3
84 AT1G54420 unknown protein; Has 9 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI
BLink).
-0.54 0.33 -0.32
85 AT2G05950 transposable element gene -0.54 0.31 -0.32
86 AT5G18880 RNA-directed DNA polymerase (reverse transcriptase)-related
family protein
-0.54 0.31 -0.34
87 AT5G45790 Ubiquitin carboxyl-terminal hydrolase family protein -0.53 0.32 -0.32
88 AT4G22430 F-box family protein -0.53 0.31 -0.32
89 AT2G33520 unknown protein; Has 68 Blast hits to 68 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.53 0.33 -0.3
90 AT1G52560 HSP20-like chaperones superfamily protein -0.53 0.29 -0.32
91 AT4G20140 Leucine-rich repeat transmembrane protein kinase GASSHO1 -0.53 0.3 -0.3
92 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein -0.53 0.32 -0.33
93 AT1G70110 Concanavalin A-like lectin protein kinase family protein -0.53 0.31 -0.32
94 AT5G35760 Beta-galactosidase related protein -0.52 0.3 -0.32
95 AT1G61340 F-box family protein -0.52 0.3 -0.29
96 AT1G35370 transposable element gene -0.52 0.32 -0.33
97 AT3G19500 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein
-0.52 0.32 -0.31
98 AT1G50350 BEST Arabidopsis thaliana protein match is: RING/U-box
superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits
to 37 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
-0.51 0.31 -0.31
99 AT3G42220 transposable element gene -0.51 0.31 -0.31
100 AT4G27660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits
to 109 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).
-0.51 0.31 -0.32
101 AT3G05460 sporozoite surface protein-related -0.51 0.31 -0.31
102 AT3G12955 SAUR-like auxin-responsive protein family -0.51 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III
0.66 0.41 -0.48 C0110
104 C0124 Isonicotinic acid - - - 0.64 0.47 -0.46