AGICode | AT3G18480 |
Description | CCAAT-displacement protein alternatively spliced product |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G18480 | CCAAT-displacement protein alternatively spliced product | CCAAT-displacement protein alternatively spliced product, CCAAT-displacement protein alternatively spliced product |
1 | 0.31 | -0.31 | ||
2 | AT5G35700 | fimbrin-like protein 2 | fimbrin-like protein 2, FIMBRIN5 | 0.72 | 0.32 | -0.33 | ||
3 | AT4G08180 | OSBP(oxysterol binding protein)-related protein 1C | OSBP(oxysterol binding protein)-related protein 1C |
0.72 | 0.32 | -0.31 | ||
4 | AT5G58270 | ABC transporter of the mitochondrion 3 | ATP-binding cassette B25, ARABIDOPSIS THALIANA ABC TRANSPORTER OF THE MITOCHONDRION 3, ABC transporter of the mitochondrion 3, STARIK 1 |
0.72 | 0.33 | -0.32 | ||
5 | AT5G13560 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G37370.1); Has 12055 Blast hits to 8846 proteins in 811 species: Archae - 217; Bacteria - 1046; Metazoa - 6104; Fungi - 1115; Plants - 528; Viruses - 14; Other Eukaryotes - 3031 (source: NCBI BLink). |
0.71 | 0.36 | -0.32 | |||
6 | AT3G05090 | Transducin/WD40 repeat-like superfamily protein | LATERAL ROOT STIMULATOR 1 | 0.7 | 0.32 | -0.32 | ||
7 | AT5G15800 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 2, SEPALLATA1 | 0.69 | 0.32 | -0.3 | ||
8 | AT3G27700 | zinc finger (CCCH-type) family protein / RNA recognition motif (RRM)-containing protein |
0.69 | 0.33 | -0.31 | |||
9 | AT5G15400 | U-box domain-containing protein | 0.69 | 0.29 | -0.32 | |||
10 | AT4G11160 | Translation initiation factor 2, small GTP-binding protein | 0.68 | 0.33 | -0.31 | |||
11 | AT3G03510 | Phototropic-responsive NPH3 family protein | 0.67 | 0.29 | -0.33 | |||
12 | AT4G21180 | DnaJ / Sec63 Brl domains-containing protein | ATERDJ2B | 0.66 | 0.31 | -0.33 | ||
13 | AT5G41330 | BTB/POZ domain with WD40/YVTN repeat-like protein | 0.65 | 0.3 | -0.31 | |||
14 | AT1G60070 | Adaptor protein complex AP-1, gamma subunit | 0.65 | 0.33 | -0.33 | |||
15 | AT1G26110 | decapping 5 | decapping 5 | 0.65 | 0.32 | -0.3 | ||
16 | AT3G24180 | Beta-glucosidase, GBA2 type family protein | 0.65 | 0.31 | -0.32 | |||
17 | AT2G02560 | cullin-associated and neddylation dissociated | CULLIN-ASSOCIATED AND NEDDYLATION DISSOCIATED 1, cullin-associated and neddylation dissociated, ETA2, HEMIVENATA, TIP120 |
0.65 | 0.29 | -0.32 | ||
18 | AT5G24390 | Ypt/Rab-GAP domain of gyp1p superfamily protein | -0.64 | 0.34 | -0.31 | |||
19 | AT2G47150 | NAD(P)-binding Rossmann-fold superfamily protein | 0.64 | 0.32 | -0.32 | |||
20 | AT5G61140 | U5 small nuclear ribonucleoprotein helicase | 0.64 | 0.32 | -0.31 | |||
21 | AT4G35890 | winged-helix DNA-binding transcription factor family protein |
0.64 | 0.34 | -0.34 | |||
22 | AT1G43900 | Protein phosphatase 2C family protein | 0.64 | 0.3 | -0.35 | |||
23 | AT1G12470 | zinc ion binding | 0.63 | 0.33 | -0.3 | |||
24 | AT1G54840 | HSP20-like chaperones superfamily protein | -0.63 | 0.33 | -0.34 | |||
25 | AT3G50590 | Transducin/WD40 repeat-like superfamily protein | 0.63 | 0.32 | -0.34 | |||
26 | AT5G57260 | cytochrome P450, family 71, subfamily B, polypeptide 10 | cytochrome P450, family 71, subfamily B, polypeptide 10 |
-0.63 | 0.33 | -0.32 | ||
27 | AT4G13780 | methionine--tRNA ligase, putative / methionyl-tRNA synthetase, putative / MetRS, putative |
0.63 | 0.32 | -0.31 | |||
28 | AT5G52580 | RabGAP/TBC domain-containing protein | 0.63 | 0.3 | -0.3 | |||
29 | AT1G05520 | Sec23/Sec24 protein transport family protein | 0.63 | 0.32 | -0.32 | |||
30 | AT1G77300 | histone methyltransferases(H3-K4 specific);histone methyltransferases(H3-K36 specific) |
ASH1 HOMOLOG 2, CAROTENOID CHLOROPLAST REGULATORY1, EARLY FLOWERING IN SHORT DAYS, LAZARUS 2, SET DOMAIN GROUP 8 |
0.63 | 0.33 | -0.33 | ||
31 | AT4G39160 | Homeodomain-like superfamily protein | 0.62 | 0.33 | -0.31 | |||
32 | AT1G60350 | NAC domain containing protein 24 | NAC domain containing protein 24, NAC domain containing protein 24 |
-0.62 | 0.31 | -0.31 | ||
33 | AT4G32640 | Sec23/Sec24 protein transport family protein | 0.62 | 0.33 | -0.31 | |||
34 | AT2G01150 | RING-H2 finger protein 2B | RING-H2 finger protein 2B | -0.62 | 0.32 | -0.3 | ||
35 | AT3G04800 | translocase inner membrane subunit 23-3 | translocase inner membrane subunit 23-3, translocase inner membrane subunit 23-3 |
-0.62 | 0.3 | -0.31 | ||
36 | AT2G38130 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | ATMAK3 | 0.62 | 0.33 | -0.31 | ||
37 | AT4G40050 | Protein of unknown function (DUF3550/UPF0682) | 0.62 | 0.31 | -0.31 | |||
38 | AT2G18960 | H(+)-ATPase 1 | H(+)-ATPase 1, H(+)-ATPase 1, OPEN STOMATA 2, PLASMA MEMBRANE PROTON ATPASE |
0.62 | 0.33 | -0.32 | ||
39 | AT4G18890 | BES1/BZR1 homolog 3 | BES1/BZR1 homolog 3 | 0.61 | 0.34 | -0.31 | ||
40 | AT5G51320 | transposable element gene | -0.61 | 0.3 | -0.32 | |||
41 | AT2G13560 | NAD-dependent malic enzyme 1 | NAD-dependent malic enzyme 1 | 0.61 | 0.32 | -0.33 | ||
42 | AT4G16447 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.31 | -0.31 | |||
43 | AT3G27410 | unknown protein; Has 10 Blast hits to 10 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.29 | -0.32 | |||
44 | AT4G32180 | pantothenate kinase 2 | pantothenate kinase 2, pantothenate kinase 2 |
0.61 | 0.32 | -0.33 | ||
45 | AT4G04630 | Protein of unknown function, DUF584 | -0.61 | 0.32 | -0.3 | |||
46 | AT1G07160 | Protein phosphatase 2C family protein | 0.61 | 0.33 | -0.29 | |||
47 | AT3G59910 | Ankyrin repeat family protein | 0.6 | 0.31 | -0.31 | |||
48 | AT5G56290 | peroxin 5 | ARABIDOPSIS PEROXIN 5, EMBRYO DEFECTIVE 2790, peroxin 5 |
0.6 | 0.31 | -0.3 | ||
49 | AT3G58740 | citrate synthase 1 | citrate synthase 1 | 0.6 | 0.33 | -0.33 | ||
50 | AT4G00940 | Dof-type zinc finger DNA-binding family protein | -0.6 | 0.31 | -0.34 | |||
51 | AT1G33760 | Integrase-type DNA-binding superfamily protein | -0.6 | 0.28 | -0.32 | |||
52 | AT5G63200 | tetratricopeptide repeat (TPR)-containing protein | 0.6 | 0.32 | -0.31 | |||
53 | AT4G27220 | NB-ARC domain-containing disease resistance protein | 0.6 | 0.35 | -0.34 | |||
54 | AT1G67880 | beta-1,4-N-acetylglucosaminyltransferase family protein | -0.59 | 0.32 | -0.32 | |||
55 | AT2G19630 | F-box and associated interaction domains-containing protein | 0.59 | 0.32 | -0.31 | |||
56 | AT2G20790 | clathrin adaptor complexes medium subunit family protein | 0.59 | 0.3 | -0.32 | |||
57 | AT5G62990 | Ubiquitin carboxyl-terminal hydrolase family protein | embryo defective 1692 | 0.59 | 0.32 | -0.31 | ||
58 | AT3G02280 | Flavodoxin family protein | 0.59 | 0.3 | -0.3 | |||
59 | AT5G19490 | Histone superfamily protein | -0.59 | 0.33 | -0.31 | |||
60 | AT2G39170 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function NEP (InterPro:IPR019320); Has 57 Blast hits to 57 proteins in 26 species: Archae - 0; Bacteria - 0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.59 | 0.32 | -0.32 | |||
61 | AT2G17660 | RPM1-interacting protein 4 (RIN4) family protein | -0.59 | 0.32 | -0.34 | |||
62 | AT2G46400 | WRKY DNA-binding protein 46 | WRKY DNA-BINDING PROTEIN 46, WRKY DNA-binding protein 46 |
-0.58 | 0.31 | -0.32 | ||
63 | AT3G15430 | Regulator of chromosome condensation (RCC1) family protein | 0.58 | 0.33 | -0.29 | |||
64 | AT4G25470 | C-repeat/DRE binding factor 2 | ATCBF2, C-repeat/DRE binding factor 2, DRE/CRT-BINDING PROTEIN 1C, FREEZING TOLERANCE QTL 4 |
-0.58 | 0.32 | -0.31 | ||
65 | AT1G53080 | Legume lectin family protein | -0.58 | 0.31 | -0.3 | |||
66 | AT2G23900 | Pectin lyase-like superfamily protein | -0.57 | 0.32 | -0.33 | |||
67 | AT1G76900 | tubby like protein 1 | tubby like protein 1, tubby like protein 1 |
-0.57 | 0.29 | -0.32 | ||
68 | AT4G19650 | Mitochondrial transcription termination factor family protein |
-0.57 | 0.32 | -0.31 | |||
69 | AT3G14640 | cytochrome P450, family 72, subfamily A, polypeptide 10 | cytochrome P450, family 72, subfamily A, polypeptide 10 |
0.57 | 0.33 | -0.33 | ||
70 | AT5G15581 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf apex; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.33 | -0.33 | |||
71 | AT3G12380 | actin-related protein 5 | actin-related protein 5, ACTIN-RELATED PROTEIN 5 |
0.57 | 0.31 | -0.32 | ||
72 | AT2G30470 | high-level expression of sugar-inducible gene 2 | high-level expression of sugar-inducible gene 2, VP1/ABI3-LIKE 1 |
0.57 | 0.31 | -0.32 | ||
73 | AT4G34110 | poly(A) binding protein 2 | ARABIDOPSIS POLY(A) BINDING 2, poly(A) binding protein 2, POLY(A) BINDING PROTEIN 2 |
0.57 | 0.34 | -0.32 | ||
74 | AT2G46190 | Mitochondrial glycoprotein family protein | -0.56 | 0.33 | -0.3 | |||
75 | AT2G17950 | Homeodomain-like superfamily protein | PGA6, WUSCHEL, WUSCHEL 1 | -0.56 | 0.32 | -0.33 | ||
76 | AT5G52140 | RING/U-box superfamily protein | -0.56 | 0.31 | -0.32 | |||
77 | AT5G18560 | Integrase-type DNA-binding superfamily protein | PUCHI | -0.56 | 0.33 | -0.31 | ||
78 | AT1G21220 | transposable element gene | -0.55 | 0.3 | -0.32 | |||
79 | AT3G11600 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to karrikin; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06270.1); Has 171 Blast hits to 171 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 171; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.32 | -0.32 | |||
80 | AT1G12610 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 1 | -0.55 | 0.31 | -0.33 | ||
81 | AT5G52760 | Copper transport protein family | -0.55 | 0.31 | -0.31 | |||
82 | AT1G01120 | 3-ketoacyl-CoA synthase 1 | 3-ketoacyl-CoA synthase 1 | -0.55 | 0.31 | -0.34 | ||
83 | AT2G20620 | Protein of unknown function (DUF626) | -0.54 | 0.33 | -0.3 | |||
84 | AT1G54420 | unknown protein; Has 9 Blast hits to 7 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.54 | 0.33 | -0.32 | |||
85 | AT2G05950 | transposable element gene | -0.54 | 0.31 | -0.32 | |||
86 | AT5G18880 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
-0.54 | 0.31 | -0.34 | |||
87 | AT5G45790 | Ubiquitin carboxyl-terminal hydrolase family protein | -0.53 | 0.32 | -0.32 | |||
88 | AT4G22430 | F-box family protein | -0.53 | 0.31 | -0.32 | |||
89 | AT2G33520 | unknown protein; Has 68 Blast hits to 68 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 2; Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.53 | 0.33 | -0.3 | |||
90 | AT1G52560 | HSP20-like chaperones superfamily protein | -0.53 | 0.29 | -0.32 | |||
91 | AT4G20140 | Leucine-rich repeat transmembrane protein kinase | GASSHO1 | -0.53 | 0.3 | -0.3 | ||
92 | AT1G29870 | tRNA synthetase class II (G, H, P and S) family protein | -0.53 | 0.32 | -0.33 | |||
93 | AT1G70110 | Concanavalin A-like lectin protein kinase family protein | -0.53 | 0.31 | -0.32 | |||
94 | AT5G35760 | Beta-galactosidase related protein | -0.52 | 0.3 | -0.32 | |||
95 | AT1G61340 | F-box family protein | -0.52 | 0.3 | -0.29 | |||
96 | AT1G35370 | transposable element gene | -0.52 | 0.32 | -0.33 | |||
97 | AT3G19500 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.52 | 0.32 | -0.31 | |||
98 | AT1G50350 | BEST Arabidopsis thaliana protein match is: RING/U-box superfamily protein (TAIR:AT3G19950.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.51 | 0.31 | -0.31 | |||
99 | AT3G42220 | transposable element gene | -0.51 | 0.31 | -0.31 | |||
100 | AT4G27660 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits to 109 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink). |
-0.51 | 0.31 | -0.32 | |||
101 | AT3G05460 | sporozoite surface protein-related | -0.51 | 0.31 | -0.31 | |||
102 | AT3G12955 | SAUR-like auxin-responsive protein family | -0.51 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
103 | C0110 | Guanosine | - | Guanosine | guanosine nucleotides degradation I, guanine and guanosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage III |
0.66 | 0.41 | -0.48 | ||
104 | C0124 | Isonicotinic acid | - | - | - | 0.64 | 0.47 | -0.46 |