AT3G21470 : -
Query Information
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AGICode AT3G21470
Description Pentatricopeptide repeat (PPR-like) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein 1 0.31 -0.33
2 AT3G54510 Early-responsive to dehydration stress protein (ERD4) -0.67 0.35 -0.3
3 AT2G06700 transposable element gene -0.65 0.33 -0.33
4 AT5G27100 glutamate receptor 2.1 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.1, glutamate receptor
2.1		 -0.65 0.32 -0.32
5 AT3G18350 Plant protein of unknown function (DUF639) -0.65 0.33 -0.3
6 AT5G12450 FBD-like domain family protein -0.64 0.31 -0.31
7 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.34 -0.31
8 AT5G37610 Eukaryotic porin family protein -0.64 0.31 -0.31
9 AT3G18900 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: synergid; CONTAINS InterPro
DOMAIN/s: F-box associated domain, type 1
(InterPro:IPR006527), F-box associated interaction domain
(InterPro:IPR017451), Protein of unknown function DUF547
(InterPro:IPR006869); BEST Arabidopsis thaliana protein
match is: Protein of unknown function, DUF547
(TAIR:AT5G66600.3).		 -0.63 0.33 -0.32
10 AT5G11530 embryonic flower 1 (EMF1) embryonic flower 1 0.62 0.32 -0.33
11 AT5G37780 calmodulin 1 ACAM-1, calmodulin 1, TOUCH 1 0.61 0.3 -0.31
12 AT3G49760 basic leucine-zipper 5 basic leucine-zipper 5, basic
leucine-zipper 5		 -0.61 0.31 -0.32
13 AT2G16970 Major facilitator superfamily protein maternal effect embryo arrest 15 -0.61 0.31 -0.3
14 AT4G17710 homeodomain GLABROUS 4 homeodomain GLABROUS 4 -0.61 0.31 -0.33
15 AT3G28490 Oxoglutarate/iron-dependent oxygenase 0.61 0.35 -0.31
16 AT1G69670 cullin 3B ARABIDOPSIS THALIANA CULLIN 3B,
cullin 3B		 0.61 0.31 -0.32
17 AT5G46140 Protein of unknown function (DUF295) -0.6 0.31 -0.32
18 AT4G24500 hydroxyproline-rich glycoprotein family protein 0.6 0.3 -0.31
19 AT5G45080 phloem protein 2-A6 phloem protein 2-A6, phloem
protein 2-A6		 -0.6 0.3 -0.32
20 AT3G32220 transposable element gene 0.6 0.32 -0.31
21 AT1G48260 CBL-interacting protein kinase 17 CBL-interacting protein kinase
17, SNF1-RELATED PROTEIN KINASE
3.21		 -0.59 0.3 -0.3
22 AT4G30050 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf whorl, sepal,
flower; EXPRESSED DURING: petal differentiation and
expansion stage; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.32 -0.33
23 AT1G76290 AMP-dependent synthetase and ligase family protein -0.59 0.32 -0.32
24 AT3G43860 glycosyl hydrolase 9A4 glycosyl hydrolase 9A4, glycosyl
hydrolase 9A4		 0.59 0.33 -0.3
25 AT2G43150 Proline-rich extensin-like family protein -0.59 0.31 -0.33
26 AT3G50250 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19270.1); Has 6 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.58 0.31 -0.3
27 AT4G20470 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 -0.58 0.33 -0.31
28 AT1G63280 Serine protease inhibitor (SERPIN) family protein -0.58 0.31 -0.29
29 AT3G14820 GDSL-like Lipase/Acylhydrolase superfamily protein -0.58 0.28 -0.32
30 AT2G43250 unknown protein; Has 32 Blast hits to 32 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.58 0.31 -0.31
31 AT1G57600 MBOAT (membrane bound O-acyl transferase) family protein -0.58 0.31 -0.33
32 AT4G24950 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.58 0.29 -0.33
33 AT1G05990 EF hand calcium-binding protein family ROOT HAIR SPECIFIC 1 0.57 0.31 -0.33
34 AT1G12630 Integrase-type DNA-binding superfamily protein -0.57 0.31 -0.3
35 AT2G14060 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.57 0.32 -0.33
36 AT5G43550 F-box associated ubiquitination effector family protein -0.57 0.32 -0.32
37 AT4G37340 cytochrome P450, family 81, subfamily D, polypeptide 3 cytochrome P450, family 81,
subfamily D, polypeptide 3		 -0.56 0.33 -0.32
38 AT2G32850 Protein kinase superfamily protein -0.56 0.33 -0.32
39 AT3G08800 ARM repeat superfamily protein SHORT-ROOT interacting embryonic
lethal		 0.56 0.32 -0.31
40 AT4G27850 Glycine-rich protein family -0.56 0.31 -0.31
41 AT5G30480 transposable element gene 0.55 0.3 -0.32
42 AT2G26630 transposable element gene -0.55 0.31 -0.33
43 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 -0.55 0.32 -0.31
44 AT4G18710 Protein kinase superfamily protein SHAGGY-LIKE KINASE 21,
BRASSINOSTEROID-INSENSITIVE 2,
DWARF 12, SHAGGY-LIKE KINASE 21,
ULTRACURVATA 1		 0.55 0.31 -0.3
45 AT2G21130 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.55 0.33 -0.3
46 AT2G31860 pseudogene, poly (ADP-ribose) glycohydrolase, putative,
contains Pfam domain, PF05028: poly (ADP-ribose)
glycohydrolase (PARG); blastp match of 59% identity and
1.4e-19 P-value to EGAD|134505|143482 114E2.c protein
{Drosophila melanogaster}		 -0.55 0.3 -0.34
47 AT3G09960 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.54 0.3 -0.31
48 AT3G22350 F-box and associated interaction domains-containing protein -0.54 0.34 -0.3
49 AT3G50160 Plant protein of unknown function (DUF247) -0.54 0.33 -0.3
50 AT2G02380 glutathione S-transferase (class zeta) 2 glutathione S-transferase (class
zeta) 2, glutathione S-transferase
(class zeta) 2		 -0.54 0.34 -0.31
51 AT1G35513 pseudogene of isochorismate synthase-related /
isochorismate mutase-related		 -0.54 0.31 -0.33
52 AT1G35860 translocon outer membrane complex 75-I translocon outer membrane complex
75-I		 -0.53 0.32 -0.32
53 AT3G15605 nucleic acid binding -0.53 0.31 -0.32
54 AT1G74990 RING/U-box superfamily protein -0.53 0.31 -0.33
55 AT3G30340 nodulin MtN21 /EamA-like transporter family protein -0.53 0.32 -0.29
56 AT3G42220 transposable element gene -0.53 0.32 -0.29
57 AT3G08900 reversibly glycosylated polypeptide 3 RGP, reversibly glycosylated
polypeptide 3		 -0.53 0.3 -0.31
58 AT4G36000 Pathogenesis-related thaumatin superfamily protein 0.53 0.31 -0.31
59 AT5G50320 radical SAM domain-containing protein / GCN5-related
N-acetyltransferase (GNAT) family protein		 Elongator protein 3,
enhancer-of-asymmetric leaves-two
1, ELONGATA 3, Elongator protein
3, HISTONE ACETYLTRANSFERASE 8,
HISTONE ACETYLTRANSFERASE OF THE
GNAT FAMILY 3		 0.52 0.29 -0.31
60 AT3G59070 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 0.52 0.31 -0.3
61 AT3G58590 Pentatricopeptide repeat (PPR) superfamily protein 0.52 0.3 -0.33
62 AT4G07660 transposable element gene 0.52 0.33 -0.31
63 AT3G12510 MADS-box family protein 0.52 0.3 -0.33
64 AT5G07930 MEI2 C-terminal RRM only like 2 MEI2 C-terminal RRM only like 2 0.51 0.33 -0.3
65 AT4G07920 transposable element gene 0.51 0.31 -0.32
66 AT5G11030 aberrant lateral root formation 4 ABERRANT LATERAL ROOT FORMATION 4 0.5 0.31 -0.31
67 AT5G54930 AT hook motif-containing protein 0.5 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0026 2-Hydroxyisobutyric acid - - β oxidation -0.72 0.42 -0.45
69 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		-0.67 0.44 -0.46 C0262
70 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		-0.66 0.43 -0.42 C0088
71 C0213 PR_MST_2410.2 - - - 0.63 0.42 -0.42
72 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.59 0.49 -0.51 C0091
73 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		-0.58 0.43 -0.43 C0186