AT3G15640 : -
Query Information
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AGICode AT3G15640
Description Rubredoxin-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G15640 Rubredoxin-like superfamily protein 1 0.31 -0.32
2 AT5G13850 nascent polypeptide-associated complex subunit alpha-like
protein 3		 nascent polypeptide-associated
complex subunit alpha-like protein
3		 0.86 0.32 -0.33
3 AT2G28190 copper/zinc superoxide dismutase 2 copper/zinc superoxide dismutase
2, COPPER/ZINC SUPEROXIDE
DISMUTASE 2		 0.83 0.31 -0.3
4 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.82 0.32 -0.32
5 AT1G08830 copper/zinc superoxide dismutase 1 copper/zinc superoxide dismutase 1 0.81 0.31 -0.3
6 AT3G52930 Aldolase superfamily protein 0.78 0.3 -0.33
7 AT4G13940 S-adenosyl-L-homocysteine hydrolase S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE
1, EMBRYO DEFECTIVE 1395,
HOMOLOGY-DEPENDENT GENE SILENCING
1, MATERNAL EFFECT EMBRYO ARREST
58, S-ADENOSYL-L-HOMOCYSTEIN
HYDROLASE 1		 0.78 0.32 -0.32
8 AT3G19130 RNA-binding protein 47B RNA-binding protein 47B,
RNA-binding protein 47B		 0.78 0.31 -0.31
9 AT2G44790 uclacyanin 2 uclacyanin 2 0.78 0.32 -0.3
10 AT1G79550 phosphoglycerate kinase phosphoglycerate kinase 0.77 0.34 -0.31
11 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.77 0.31 -0.31
12 AT5G57870 MIF4G domain-containing protein / MA3 domain-containing
protein		 eukaryotic translation Initiation
Factor isoform 4G1		 0.77 0.32 -0.32
13 AT5G49210 unknown protein; Has 3675 Blast hits to 2315 proteins in
312 species: Archae - 2; Bacteria - 342; Metazoa - 1190;
Fungi - 281; Plants - 114; Viruses - 4; Other Eukaryotes -
1742 (source: NCBI BLink).		 0.77 0.31 -0.32
14 AT1G68540 NAD(P)-binding Rossmann-fold superfamily protein cinnamoyl coA reductase-like 6,
tetraketide alpha-pyrone reductase
2		 -0.77 0.31 -0.29
15 AT4G29390 Ribosomal protein S30 family protein 0.76 0.29 -0.32
16 AT3G17465 ribosomal protein L3 plastid ribosomal protein L3 plastid 0.76 0.31 -0.33
17 AT3G01790 Ribosomal protein L13 family protein 0.76 0.3 -0.31
18 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.75 0.3 -0.31
19 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.75 0.33 -0.3
20 AT2G32070 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.75 0.32 -0.31
21 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.74 0.3 -0.33
22 AT4G02230 Ribosomal protein L19e family protein 0.74 0.33 -0.32
23 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.74 0.31 -0.31
24 AT5G60640 PDI-like 1-4 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 2, PDI-like
1-4, PROTEIN DISULFIDE ISOMERASE
2, PDI-like 1-4		 0.74 0.36 -0.31
25 AT2G01140 Aldolase superfamily protein PIGMENT DEFECTIVE 345 0.74 0.33 -0.32
26 AT1G70770 Protein of unknown function DUF2359, transmembrane 0.73 0.3 -0.32
27 AT5G66680 dolichyl-diphosphooligosaccharide-protein
glycosyltransferase 48kDa subunit family protein		 DEFECTIVE GLYCOSYLATION 0.73 0.31 -0.29
28 AT5G13420 Aldolase-type TIM barrel family protein 0.73 0.31 -0.33
29 AT2G30050 transducin family protein / WD-40 repeat family protein 0.73 0.31 -0.31
30 AT3G57550 guanylate kinase guanylate kinase, GUANYLATE KINAS
2		 0.73 0.31 -0.31
31 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein 0.73 0.34 -0.3
32 AT4G20020 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast
hits to 16023 proteins in 1033 species: Archae - 4;
Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants -
3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI
BLink).		 0.73 0.32 -0.29
33 AT5G05450 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.72 0.3 -0.32
34 AT3G04230 Ribosomal protein S5 domain 2-like superfamily protein 0.72 0.31 -0.3
35 AT1G71400 receptor like protein 12 receptor like protein 12, receptor
like protein 12		 0.72 0.31 -0.32
36 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C		 0.72 0.33 -0.34
37 AT1G52730 Transducin/WD40 repeat-like superfamily protein 0.72 0.3 -0.32
38 AT3G01720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G25265.1); Has 374 Blast hits to 211 proteins in
23 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 316; Viruses - 0; Other Eukaryotes - 58
(source: NCBI BLink).		 0.72 0.31 -0.31
39 AT1G52380 NUP50 (Nucleoporin 50 kDa) protein 0.72 0.32 -0.32
40 AT2G01970 Endomembrane protein 70 protein family 0.72 0.31 -0.32
41 AT5G16490 ROP-interactive CRIB motif-containing protein 4 ROP-interactive CRIB
motif-containing protein 4		 -0.72 0.33 -0.32
42 AT3G20000 translocase of the outer mitochondrial membrane 40 translocase of the outer
mitochondrial membrane 40		 0.71 0.29 -0.32
43 AT1G10130 endoplasmic reticulum-type calcium-transporting ATPase 3 ARABIDOPSIS THALIANA ER-TYPE
CA2+-ATPASE 3, endoplasmic
reticulum-type
calcium-transporting ATPase 3		 0.71 0.3 -0.3
44 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.71 0.34 -0.33
45 AT5G19680 Leucine-rich repeat (LRR) family protein 0.71 0.32 -0.31
46 AT4G39520 GTP-binding protein-related 0.71 0.29 -0.34
47 AT1G67840 chloroplast sensor kinase chloroplast sensor kinase -0.71 0.31 -0.32
48 AT4G34480 O-Glycosyl hydrolases family 17 protein -0.7 0.34 -0.32
49 AT1G70190 Ribosomal protein L7/L12, oligomerisation;Ribosomal protein
L7/L12, C-terminal/adaptor protein ClpS-like		 0.7 0.29 -0.33
50 AT1G51590 alpha-mannosidase 1 ALPHA-MANNOSIDASE IB,
alpha-mannosidase 1		 0.7 0.3 -0.33
51 AT5G54980 Uncharacterised protein family (UPF0497) -0.7 0.33 -0.31
52 AT1G53170 ethylene response factor 8 ATERF-8, ETHYLENE RESPONSE ELEMENT
BINDING FACTOR 4, ethylene
response factor 8		 -0.7 0.34 -0.31
53 AT1G11680 CYTOCHROME P450 51G1 CYTOCHROME P450 51, CYTOCHROME
P450 51A2, CYTOCHROME P450 51G1,
embryo defective 1738		 0.69 0.3 -0.32
54 AT1G76020 Thioredoxin superfamily protein -0.69 0.32 -0.3
55 AT2G19590 ACC oxidase 1 ACC oxidase 1, ATACO1 0.69 0.3 -0.32
56 AT1G19520 pentatricopeptide (PPR) repeat-containing protein NUCLEAR FUSION DEFECTIVE 5 0.69 0.32 -0.33
57 AT5G25220 KNOTTED1-like homeobox gene 3 KNOTTED1-like homeobox gene 3 -0.69 0.3 -0.31
58 AT1G19835 Plant protein of unknown function (DUF869) -0.69 0.3 -0.32
59 AT2G41870 Remorin family protein -0.69 0.3 -0.3
60 AT4G35850 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.32 -0.35
61 AT2G20780 Major facilitator superfamily protein 0.69 0.34 -0.33
62 AT1G71780 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endoplasmic reticulum; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; Has 34 Blast hits to 34
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.69 0.35 -0.3
63 AT2G34520 mitochondrial ribosomal protein S14 mitochondrial ribosomal protein
S14		 0.69 0.32 -0.31
64 AT1G69230 SPIRAL1-like2 SPIRAL1-like2 -0.69 0.31 -0.29
65 AT3G05530 regulatory particle triple-A ATPase 5A ATS6A.2, regulatory particle
triple-A ATPase 5A		 0.69 0.32 -0.33
66 AT1G29700 Metallo-hydrolase/oxidoreductase superfamily protein -0.68 0.32 -0.33
67 AT4G02630 Protein kinase superfamily protein -0.68 0.32 -0.31
68 AT5G07890 myosin heavy chain-related -0.68 0.31 -0.31
69 AT1G11410 S-locus lectin protein kinase family protein -0.67 0.3 -0.35
70 AT5G11060 KNOTTED1-like homeobox gene 4 KNOTTED1-like homeobox gene 4 -0.66 0.32 -0.3
71 AT1G19715 Mannose-binding lectin superfamily protein -0.66 0.31 -0.31
72 AT5G52460 FBD, F-box and Leucine Rich Repeat domains containing
protein		 embryo sac development arrest 41 -0.66 0.29 -0.32
73 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.66 0.33 -0.3
74 AT3G18930 RING/U-box superfamily protein -0.66 0.31 -0.34
75 AT1G17145 RING/U-box superfamily protein -0.65 0.3 -0.36
76 AT5G37360 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast thylakoid membrane, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 -0.65 0.31 -0.31
77 AT5G13880 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G47920.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.65 0.31 -0.32
78 AT5G26190 Cysteine/Histidine-rich C1 domain family protein -0.65 0.3 -0.31
79 AT5G45630 Protein of unknown function, DUF584 -0.64 0.3 -0.32
80 AT4G29070 Phospholipase A2 family protein -0.64 0.31 -0.32
81 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.64 0.31 -0.33
82 AT1G67440 Minichromosome maintenance (MCM2/3/5) family protein embryo defective 1688 -0.63 0.29 -0.3
83 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.3 -0.29
84 AT1G47610 Transducin/WD40 repeat-like superfamily protein -0.63 0.33 -0.3
85 AT4G01950 glycerol-3-phosphate acyltransferase 3 ATGPAT3, glycerol-3-phosphate
acyltransferase 3		 -0.63 0.32 -0.31
86 ATCG00780 ribosomal protein L14 ribosomal protein L14 -0.63 0.32 -0.31
87 AT3G27925 DegP protease 1 DegP protease 1, DegP protease 1 -0.63 0.31 -0.33
88 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 -0.63 0.33 -0.32
89 AT5G03130 unknown protein; Has 1 Blast hits to 1 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.62 0.3 -0.33
90 AT5G58830 Subtilisin-like serine endopeptidase family protein -0.62 0.31 -0.3
91 AT2G03530 ureide permease 2 ARABIDOPSIS THALIANA UREIDE
PERMEASE 2, ureide permease 2		 -0.62 0.31 -0.32
92 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.62 0.3 -0.33
93 AT5G40910 Disease resistance protein (TIR-NBS-LRR class) family -0.61 0.33 -0.32
94 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.61 0.33 -0.3
95 AT2G46180 golgin candidate 4 golgin candidate 4 -0.61 0.34 -0.33
96 AT4G28706 pfkB-like carbohydrate kinase family protein -0.61 0.31 -0.31
97 AT5G35170 adenylate kinase family protein -0.61 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
98 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.77 0.46 -0.44 C0109
99 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.71 0.46 -0.44 C0056
100 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.68 0.46 -0.42 C0107
101 C0169 MST_2105.7 - - - -0.67 0.44 -0.47
102 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.66 0.3 -0.31 C0142
103 C0162 MST_1588.3 - - - -0.64 0.44 -0.44