AT3G16560 : -
Query Information
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AGICode AT3G16560
Description Protein phosphatase 2C family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G16560 Protein phosphatase 2C family protein 1 0.32 -0.31
2 AT2G15620 nitrite reductase 1 ARABIDOPSIS THALIANA NITRITE
REDUCTASE, NITRITE REDUCTASE,
nitrite reductase 1		 0.85 0.3 -0.31
3 AT5G04950 nicotianamine synthase 1 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 1, nicotianamine synthase
1		 0.83 0.34 -0.31
4 AT1G66970 SHV3-like 2 Glycerophosphodiester
phosphodiesterase (GDPD) like 1,
SHV3-like 2		 0.83 0.32 -0.31
5 AT1G78660 gamma-glutamyl hydrolase 1 gamma-glutamyl hydrolase 1,
gamma-glutamyl hydrolase 1		 -0.83 0.31 -0.31
6 AT1G62045 BEST Arabidopsis thaliana protein match is: ankyrin repeat
family protein (TAIR:AT1G11740.1); Has 26 Blast hits to 26
proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.82 0.3 -0.3
7 AT5G35080 INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Mannose-6-phosphate receptor, binding
(InterPro:IPR009011), Glucosidase II beta subunit-like
(InterPro:IPR012913); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.8 0.32 -0.32
8 AT2G38170 cation exchanger 1 ATCAX1, cation exchanger 1, RARE
COLD INDUCIBLE 4		 0.8 0.32 -0.33
9 AT2G41560 autoinhibited Ca(2+)-ATPase, isoform 4 autoinhibited Ca(2+)-ATPase,
isoform 4		 0.8 0.3 -0.32
10 AT3G61150 homeodomain GLABROUS 1 HOMEODOMAIN-GLABRA2 1, homeodomain
GLABROUS 1		 0.8 0.31 -0.32
11 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h -0.79 0.3 -0.32
12 AT4G30000 Dihydropterin pyrophosphokinase / Dihydropteroate synthase 0.79 0.33 -0.31
13 AT5G54870 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
vacuole; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G27020.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.78 0.31 -0.29
14 AT3G27880 Protein of unknown function (DUF1645) -0.78 0.33 -0.31
15 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2		 -0.78 0.3 -0.3
16 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 -0.77 0.32 -0.31
17 AT4G22340 cytidinediphosphate diacylglycerol synthase 2 cytidinediphosphate diacylglycerol
synthase 2		 -0.77 0.31 -0.3
18 AT1G22650 Plant neutral invertase family protein alkaline/neutral invertase D 0.77 0.32 -0.29
19 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 -0.77 0.32 -0.28
20 AT1G68140 Protein of unknown function (DUF1644) -0.77 0.33 -0.3
21 AT4G25960 P-glycoprotein 2 ATP-binding cassette B2,
P-glycoprotein 2		 0.77 0.32 -0.32
22 AT4G23130 cysteine-rich RLK (RECEPTOR-like protein kinase) 5 cysteine-rich RLK (RECEPTOR-like
protein kinase) 5, RECEPTOR-LIKE
PROTEIN KINASE 6		 0.77 0.3 -0.31
23 AT2G47960 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF974 (InterPro:IPR010378); Has 285 Blast
hits to 284 proteins in 126 species: Archae - 0; Bacteria -
0; Metazoa - 150; Fungi - 68; Plants - 32; Viruses - 0;
Other Eukaryotes - 35 (source: NCBI BLink).		 -0.77 0.3 -0.31
24 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 -0.77 0.32 -0.33
25 AT3G45210 Protein of unknown function, DUF584 0.77 0.3 -0.32
26 AT4G24160 alpha/beta-Hydrolases superfamily protein -0.77 0.32 -0.3
27 AT3G51090 Protein of unknown function (DUF1640) -0.76 0.32 -0.33
28 AT1G64610 Transducin/WD40 repeat-like superfamily protein -0.76 0.3 -0.32
29 AT5G41560 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin
ligase, Det1/DDB1-complexing (InterPro:IPR018276); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.76 0.3 -0.3
30 AT3G08990 Yippee family putative zinc-binding protein -0.76 0.32 -0.29
31 AT3G25130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 9 growth stages; Has 3885 Blast hits to 2658
proteins in 280 species: Archae - 12; Bacteria - 208;
Metazoa - 970; Fungi - 222; Plants - 148; Viruses - 11;
Other Eukaryotes - 2314 (source: NCBI BLink).		 0.76 0.33 -0.31
32 AT2G05520 glycine-rich protein 3 GLYCINE-RICH PROTEIN 3,
ARABIDOPSIS GLYCINE RICH PROTEIN
3, glycine-rich protein 3,
GLYCINE-RICH PROTEIN 3		 0.76 0.31 -0.33
33 AT1G77770 Protein of unknown function (DUF1644) -0.75 0.31 -0.31
34 AT1G23060 BEST Arabidopsis thaliana protein match is: TPX2 (targeting
protein for Xklp2) protein family (TAIR:AT1G70950.1); Has
449 Blast hits to 419 proteins in 98 species: Archae - 0;
Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158;
Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink).		 -0.75 0.32 -0.3
35 AT3G11100 sequence-specific DNA binding transcription factors -0.75 0.31 -0.3
36 AT1G24470 beta-ketoacyl reductase 2 ATKCR2, beta-ketoacyl reductase 2 0.75 0.29 -0.3
37 AT4G02920 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G03340.1); Has 41 Blast hits
to 41 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.32 -0.32
38 AT1G07650 Leucine-rich repeat transmembrane protein kinase 0.75 0.32 -0.31
39 AT3G06490 myb domain protein 108 myb domain protein 108,
BOTRYTIS-SUSCEPTIBLE1, myb domain
protein 108		 -0.75 0.31 -0.33
40 AT5G10560 Glycosyl hydrolase family protein 0.75 0.3 -0.33
41 AT1G69370 chorismate mutase 3 cm-3, chorismate mutase 3 -0.75 0.33 -0.31
42 AT1G48750 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.75 0.32 -0.31
43 AT2G31200 actin depolymerizing factor 6 actin depolymerizing factor 6,
ATADF6		 -0.75 0.3 -0.31
44 AT3G11330 plant intracellular ras group-related LRR 9 plant intracellular ras
group-related LRR 9		 -0.74 0.32 -0.33
45 AT4G21790 tobamovirus multiplication 1 ATTOM1, tobamovirus multiplication
1		 -0.74 0.33 -0.31
46 AT3G10640 SNF7 family protein VPS60.1 -0.74 0.32 -0.3
47 AT3G62600 DNAJ heat shock family protein ATERDJ3B, ERDJ3B -0.74 0.31 -0.32
48 AT5G45900 ThiF family protein AUTOPHAGY 7, ATAPG7, ATATG7,
AUTOPHAGY-RELATED 7		 -0.74 0.33 -0.32
49 AT5G16960 Zinc-binding dehydrogenase family protein -0.74 0.31 -0.33
50 AT3G24200 FAD/NAD(P)-binding oxidoreductase family protein -0.74 0.32 -0.3
51 AT2G06255 ELF4-like 3 ELF4-like 3 -0.74 0.32 -0.31
52 AT4G36470 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.74 0.32 -0.33
53 AT1G69730 Wall-associated kinase family protein 0.73 0.33 -0.32
54 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 -0.73 0.33 -0.32
55 AT1G61065 Protein of unknown function (DUF1218) -0.73 0.31 -0.31
56 AT3G26320 cytochrome P450, family 71, subfamily B, polypeptide 36 cytochrome P450, family 71,
subfamily B, polypeptide 36		 0.73 0.31 -0.32
57 AT3G17100 sequence-specific DNA binding transcription factors -0.73 0.32 -0.33
58 AT5G40060 Disease resistance protein (NBS-LRR class) family 0.73 0.33 -0.33
59 AT2G18210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G36500.1); Has 50 Blast hits
to 50 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.73 0.33 -0.31
60 AT3G21610 Acid phosphatase/vanadium-dependent haloperoxidase-related
protein		 -0.73 0.31 -0.3
61 AT4G30490 AFG1-like ATPase family protein -0.73 0.31 -0.31
62 AT1G76350 Plant regulator RWP-RK family protein -0.73 0.32 -0.32
63 AT1G02000 UDP-D-glucuronate 4-epimerase 2 UDP-D-glucuronate 4-epimerase 2 -0.73 0.32 -0.33
64 AT3G25870 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits
to 50 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.73 0.31 -0.31
65 AT1G35910 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 trehalose-6-phosphate phosphatase
D		 -0.73 0.31 -0.31
66 AT1G68410 Protein phosphatase 2C family protein -0.73 0.32 -0.32
67 AT4G35440 chloride channel E ATCLC-E, chloride channel E,
CHLORIDE CHANNEL E		 0.73 0.31 -0.32
68 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.73 0.31 -0.32
69 AT1G75300 NmrA-like negative transcriptional regulator family protein -0.72 0.31 -0.33
70 AT1G01420 UDP-glucosyl transferase 72B3 UDP-glucosyl transferase 72B3 0.72 0.31 -0.28
71 AT1G14360 UDP-galactose transporter 3 ATUTR3, UDP-galactose transporter
3		 -0.72 0.31 -0.33
72 AT1G25370 Protein of unknown function (DUF1639) -0.72 0.32 -0.32
73 AT4G28300 Protein of unknown function (DUF1421) -0.72 0.31 -0.32
74 AT5G11590 Integrase-type DNA-binding superfamily protein TINY2 0.72 0.31 -0.32
75 AT5G16050 general regulatory factor 5 GF14 UPSILON, general regulatory
factor 5		 -0.72 0.32 -0.32
76 AT3G28730 high mobility group high mobility group, high mobility
group, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR D, SSRP1		 0.72 0.33 -0.32
77 AT1G26540 Agenet domain-containing protein 0.72 0.33 -0.32
78 AT4G21810 DERLIN-2.1 DERLIN-2.1 -0.72 0.32 -0.34
79 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.72 0.32 -0.31
80 AT4G23300 cysteine-rich RLK (RECEPTOR-like protein kinase) 22 cysteine-rich RLK (RECEPTOR-like
protein kinase) 22		 0.72 0.32 -0.3
81 AT4G13790 SAUR-like auxin-responsive protein family -0.71 0.34 -0.28
82 AT5G03660 Family of unknown function (DUF662) -0.71 0.31 -0.29
83 AT3G29350 histidine-containing phosphotransmitter 2 histidine-containing
phosphotransmitter 2		 -0.71 0.32 -0.34
84 AT4G22730 Leucine-rich repeat protein kinase family protein 0.71 0.3 -0.31
85 AT3G62430 Protein with RNI-like/FBD-like domains 0.71 0.3 -0.37
86 AT1G53450 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14830.2); Has 71 Blast hits
to 71 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.71 0.31 -0.32
87 AT3G53970 proteasome inhibitor-related -0.71 0.3 -0.33
88 AT2G29320 NAD(P)-binding Rossmann-fold superfamily protein 0.71 0.31 -0.32
89 AT4G33940 RING/U-box superfamily protein -0.71 0.32 -0.32
90 AT1G64400 AMP-dependent synthetase and ligase family protein long-chain acyl-CoA synthetase 3 0.71 0.3 -0.32
91 AT4G37540 LOB domain-containing protein 39 LOB domain-containing protein 39 0.71 0.32 -0.33
92 AT1G64200 vacuolar H+-ATPase subunit E isoform 3 vacuolar H+-ATPase subunit E
isoform 3		 -0.71 0.3 -0.33
93 AT4G34950 Major facilitator superfamily protein 0.71 0.31 -0.3
94 AT1G20620 catalase 3 ATCAT3, catalase 3, SENESCENCE 2 0.71 0.32 -0.33
95 AT4G16740 terpene synthase 03 terpene synthase 03, terpene
synthase 03		 -0.7 0.3 -0.31
96 AT1G74330 Protein kinase superfamily protein -0.7 0.3 -0.3
97 AT2G41490 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-glcnac-adolichol phosphate
glcnac-1-p-transferase		 -0.7 0.32 -0.29
98 AT5G64230 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 4 anthesis, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G19920.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.7 0.34 -0.3
99 AT4G10140 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: N-terminal protein myristoylation; EXPRESSED
IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: Protein of unknown
function DUF2062 (InterPro:IPR018639); BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G33490.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 -0.7 0.31 -0.29
100 AT2G30740 Protein kinase superfamily protein -0.7 0.32 -0.32
101 AT1G30135 jasmonate-zim-domain protein 8 jasmonate-zim-domain protein 8,
TIFY5A		 -0.7 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - -0.89 0.44 -0.45 C0067
103 C0237 Sinapyl alcohol - Sinapyl-alcohol monolignol glucosides biosynthesis,
phenylpropanoid biosynthesis 		-0.87 0.47 -0.43 C0237
104 C0265 Vitexin - - - -0.85 0.46 -0.44
105 C0128 Jasmonic acid (+/-)-Jasmonic acid (+)-Jasmonate; (-)-Jasmonate jasmonic acid biosynthesis -0.84 0.45 -0.46 C0128
106 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		-0.81 0.45 -0.45 C0190
107 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.76 0.45 -0.41 C0220