AGICode | AT3G17330 |
Description | evolutionarily conserved C-terminal region 6 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G17330 | evolutionarily conserved C-terminal region 6 | evolutionarily conserved C-terminal region 6 |
1 | 0.3 | -0.3 | ||
2 | AT5G02550 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.31 | -0.3 | |||
3 | AT4G20110 | VACUOLAR SORTING RECEPTOR 7 | binding protein of 80 kDa 3;1, VACUOLAR SORTING RECEPTOR 3;1, VACUOLAR SORTING RECEPTOR 7 |
-0.7 | 0.32 | -0.34 | ||
4 | AT5G07100 | WRKY DNA-binding protein 26 | WRKY DNA-binding protein 26 | -0.7 | 0.32 | -0.32 | ||
5 | AT2G38100 | proton-dependent oligopeptide transport (POT) family protein |
0.68 | 0.34 | -0.34 | |||
6 | AT1G11040 | HSP40/DnaJ peptide-binding protein | 0.68 | 0.31 | -0.32 | |||
7 | AT5G53550 | YELLOW STRIPE like 3 | YELLOW STRIPE LIKE 3, YELLOW STRIPE like 3 |
-0.68 | 0.31 | -0.33 | ||
8 | AT1G80370 | Cyclin A2;4 | Cyclin A2;4 | 0.66 | 0.29 | -0.31 | ||
9 | AT2G27350 | OTU-like cysteine protease family protein | otubain-like deubiquitinase 1 | -0.66 | 0.31 | -0.3 | ||
10 | AT2G47880 | Glutaredoxin family protein | 0.66 | 0.34 | -0.31 | |||
11 | AT3G54010 | FKBP-type peptidyl-prolyl cis-trans isomerase family protein |
DEI1, PASTICCINO 1 | -0.66 | 0.3 | -0.31 | ||
12 | AT5G63950 | chromatin remodeling 24 | chromatin remodeling 24 | 0.65 | 0.3 | -0.34 | ||
13 | AT2G22490 | Cyclin D2;1 | ATCYCD2;1, Cyclin D2;1 | -0.65 | 0.31 | -0.33 | ||
14 | AT4G30410 | sequence-specific DNA binding transcription factors | 0.63 | 0.31 | -0.31 | |||
15 | AT1G04500 | CCT motif family protein | -0.63 | 0.35 | -0.32 | |||
16 | AT5G05080 | ubiquitin-conjugating enzyme 22 | ATUBC22, ubiquitin-conjugating enzyme 22 |
0.63 | 0.33 | -0.33 | ||
17 | AT5G38780 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.63 | 0.34 | -0.32 | |||
18 | AT5G29000 | Homeodomain-like superfamily protein | PHR1-like 1 | -0.63 | 0.34 | -0.32 | ||
19 | AT1G31820 | Amino acid permease family protein | -0.63 | 0.33 | -0.3 | |||
20 | AT2G40620 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.62 | 0.31 | -0.29 | |||
21 | AT5G03455 | Rhodanese/Cell cycle control phosphatase superfamily protein |
ARSENATE REDUCTASE 2, ARATH;CDC25, CDC25 |
-0.62 | 0.32 | -0.3 | ||
22 | AT1G66150 | transmembrane kinase 1 | transmembrane kinase 1 | 0.62 | 0.33 | -0.31 | ||
23 | AT3G62660 | galacturonosyltransferase-like 7 | galacturonosyltransferase-like 7 | 0.62 | 0.31 | -0.3 | ||
24 | AT3G07880 | Immunoglobulin E-set superfamily protein | SUPERCENTIPEDE1 | 0.62 | 0.31 | -0.31 | ||
25 | AT3G05090 | Transducin/WD40 repeat-like superfamily protein | LATERAL ROOT STIMULATOR 1 | -0.62 | 0.33 | -0.32 | ||
26 | AT4G16515 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 6 | 0.62 | 0.3 | -0.31 | ||
27 | AT4G39860 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits to 146 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.62 | 0.31 | -0.34 | |||
28 | AT4G39400 | Leucine-rich receptor-like protein kinase family protein | ATBRI1, BR INSENSITIVE 1, BRASSINOSTEROID INSENSITIVE 1, CABBAGE 2, DWARF 2 |
0.61 | 0.34 | -0.35 | ||
29 | AT2G25000 | WRKY DNA-binding protein 60 | ATWRKY60, WRKY DNA-binding protein 60 |
-0.61 | 0.33 | -0.32 | ||
30 | AT2G22600 | RNA-binding KH domain-containing protein | 0.61 | 0.32 | -0.3 | |||
31 | AT3G47420 | phosphate starvation-induced gene 3 | Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3, Glycerol-3-phosphate permease 1, phosphate starvation-induced gene 3 |
-0.61 | 0.31 | -0.32 | ||
32 | AT1G13750 | Purple acid phosphatases superfamily protein | -0.61 | 0.31 | -0.3 | |||
33 | AT3G13980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54200.1); Has 1485 Blast hits to 418 proteins in 98 species: Archae - 0; Bacteria - 6; Metazoa - 246; Fungi - 61; Plants - 107; Viruses - 6; Other Eukaryotes - 1059 (source: NCBI BLink). |
0.6 | 0.34 | -0.33 | |||
34 | AT4G33710 | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein |
0.6 | 0.3 | -0.31 | |||
35 | AT3G51330 | Eukaryotic aspartyl protease family protein | -0.6 | 0.31 | -0.32 | |||
36 | AT2G43970 | RNA-binding protein | -0.6 | 0.32 | -0.34 | |||
37 | AT2G20550 | HSP40/DnaJ peptide-binding protein | 0.6 | 0.35 | -0.33 | |||
38 | AT3G57860 | UV-B-insensitive 4-like | GIGAS CELL 1, OMISSION OF SECOND DIVISION, UV-B-insensitive 4-like |
0.59 | 0.3 | -0.32 | ||
39 | AT1G48330 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G17580.1); Has 40 Blast hits to 40 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.31 | -0.32 | |||
40 | AT2G01890 | purple acid phosphatase 8 | PURPLE ACID PHOSPHATASE 8, purple acid phosphatase 8 |
0.59 | 0.33 | -0.32 | ||
41 | AT3G06130 | Heavy metal transport/detoxification superfamily protein | 0.59 | 0.31 | -0.32 | |||
42 | AT3G52130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.58 | 0.31 | -0.32 | |||
43 | AT2G47900 | tubby like protein 3 | tubby like protein 3, tubby like protein 3 |
0.58 | 0.31 | -0.34 | ||
44 | AT5G38195 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.58 | 0.33 | -0.31 | |||
45 | AT3G26210 | cytochrome P450, family 71, subfamily B, polypeptide 23 | cytochrome P450, family 71, subfamily B, polypeptide 23 |
-0.58 | 0.31 | -0.33 | ||
46 | AT5G25370 | phospholipase D alpha 3 | phospholipase D alpha 3 | 0.58 | 0.31 | -0.33 | ||
47 | AT3G23750 | Leucine-rich repeat protein kinase family protein | 0.58 | 0.32 | -0.32 | |||
48 | AT3G12920 | SBP (S-ribonuclease binding protein) family protein | BOI-related gene 3 | 0.58 | 0.3 | -0.3 | ||
49 | AT3G15550 | unknown protein; Has 25732 Blast hits to 16979 proteins in 961 species: Archae - 144; Bacteria - 1801; Metazoa - 12681; Fungi - 1868; Plants - 912; Viruses - 94; Other Eukaryotes - 8232 (source: NCBI BLink). |
0.58 | 0.31 | -0.32 | |||
50 | AT1G19220 | auxin response factor 19 | AUXIN RESPONSE FACTOR11, auxin response factor 19, indole-3-acetic acid inducible 22 |
0.58 | 0.31 | -0.33 | ||
51 | AT1G31240 | Bromodomain transcription factor | 0.58 | 0.34 | -0.31 | |||
52 | AT3G26220 | cytochrome P450, family 71, subfamily B, polypeptide 3 | cytochrome P450, family 71, subfamily B, polypeptide 3 |
-0.58 | 0.32 | -0.33 | ||
53 | AT2G20540 | mitochondrial editing factor 21 | mitochondrial editing factor 21 | -0.57 | 0.29 | -0.33 | ||
54 | AT5G19660 | SITE-1 protease | SITE-1 PROTEASE, ATSBT6.1, SITE-1 protease |
-0.57 | 0.31 | -0.31 | ||
55 | AT3G50150 | Plant protein of unknown function (DUF247) | 0.57 | 0.3 | -0.32 | |||
56 | AT4G39410 | WRKY DNA-binding protein 13 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 13, WRKY DNA-binding protein 13 |
0.57 | 0.31 | -0.31 | ||
57 | ATMG00060 | NADH dehydrogenase subunit 5C | NADH DEHYDROGENASE SUBUNIT 5, NADH DEHYDROGENASE SUBUNIT 5.3, NADH dehydrogenase subunit 5C |
-0.56 | 0.32 | -0.32 | ||
58 | AT1G69040 | ACT domain repeat 4 | ACT domain repeat 4 | 0.56 | 0.31 | -0.32 | ||
59 | AT1G61720 | NAD(P)-binding Rossmann-fold superfamily protein | BANYULS | -0.56 | 0.31 | -0.32 | ||
60 | AT1G71770 | poly(A)-binding protein 5 | poly(A)-binding protein 5 | 0.56 | 0.3 | -0.3 | ||
61 | AT2G47830 | Cation efflux family protein | -0.56 | 0.31 | -0.33 | |||
62 | AT5G20990 | molybdopterin biosynthesis CNX1 protein / molybdenum cofactor biosynthesis enzyme CNX1 (CNX1) |
B73, CHLORATE RESISTANT 6, CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE, CO-FACTOR FOR NITRATE REDUCTASE AND XANTHINE DEHYDROGENASE 1, SIRTINOL 4 |
-0.56 | 0.31 | -0.32 | ||
63 | AT1G03540 | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.56 | 0.3 | -0.33 | |||
64 | AT1G63060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: petal, leaf whorl, male gametophyte, flower; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G07330.1); Has 42 Blast hits to 42 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.55 | 0.31 | -0.29 | |||
65 | AT5G67260 | CYCLIN D3;2 | CYCLIN D3;2 | 0.55 | 0.3 | -0.31 | ||
66 | AT5G44060 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G04000.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.55 | 0.31 | -0.32 | |||
67 | AT4G09360 | NB-ARC domain-containing disease resistance protein | -0.55 | 0.32 | -0.3 | |||
68 | AT3G29792 | transposable element gene | -0.54 | 0.31 | -0.31 | |||
69 | AT1G50930 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G20557.1); Has 215 Blast hits to 213 proteins in 63 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 10; Plants - 45; Viruses - 5; Other Eukaryotes - 70 (source: NCBI BLink). |
0.54 | 0.33 | -0.32 | |||
70 | AT3G02980 | MEIOTIC CONTROL OF CROSSOVERS1 | MEIOTIC CONTROL OF CROSSOVERS1 | -0.54 | 0.31 | -0.3 | ||
71 | AT5G14860 | UDP-Glycosyltransferase superfamily protein | 0.54 | 0.32 | -0.33 | |||
72 | AT5G18120 | APR-like 7 | APR-like 7, APR-like 7 | 0.54 | 0.3 | -0.3 | ||
73 | AT2G28890 | poltergeist like 4 | poltergeist like 4 | -0.54 | 0.32 | -0.32 | ||
74 | AT2G33420 | Protein of unknown function (DUF810) | 0.54 | 0.32 | -0.3 | |||
75 | AT1G35720 | annexin 1 | annexin 1, ATOXY5, OXY5 | -0.54 | 0.34 | -0.32 | ||
76 | AT2G26280 | CTC-interacting domain 7 | CTC-interacting domain 7 | -0.53 | 0.32 | -0.33 | ||
77 | AT5G49290 | receptor like protein 56 | receptor like protein 56, receptor like protein 56 |
-0.52 | 0.32 | -0.3 | ||
78 | AT5G07830 | glucuronidase 2 | glucuronidase 2, glucuronidase 2 | -0.52 | 0.33 | -0.31 | ||
79 | AT4G02380 | senescence-associated gene 21 | Arabidopsis thaliana late embryogenensis abundant like 5, senescence-associated gene 21 |
-0.52 | 0.3 | -0.32 | ||
80 | AT1G53310 | phosphoenolpyruvate carboxylase 1 | ATPEPC1, phosphoenolpyruvate carboxylase 1, PEP(PHOSPHOENOLPYRUVATE) CARBOXYLASE 1, phosphoenolpyruvate carboxylase 1 |
-0.52 | 0.31 | -0.34 | ||
81 | AT5G39590 | TLD-domain containing nucleolar protein | -0.52 | 0.33 | -0.31 | |||
82 | AT1G19250 | flavin-dependent monooxygenase 1 | flavin-dependent monooxygenase 1 | -0.52 | 0.31 | -0.3 | ||
83 | AT2G26450 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.51 | 0.31 | -0.32 | |||
84 | AT5G02210 | GCK domain-containing protein | -0.51 | 0.3 | -0.32 | |||
85 | AT1G61420 | S-locus lectin protein kinase family protein | -0.51 | 0.33 | -0.34 | |||
86 | AT1G57700 | Protein kinase superfamily protein | -0.51 | 0.31 | -0.32 | |||
87 | AT2G26660 | SPX domain gene 2 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 2, SPX domain gene 2 |
-0.51 | 0.31 | -0.32 | ||
88 | AT1G23140 | Calcium-dependent lipid-binding (CaLB domain) family protein |
-0.51 | 0.31 | -0.32 | |||
89 | AT1G33580 | transposable element gene | -0.51 | 0.3 | -0.33 | |||
90 | AT3G17790 | purple acid phosphatase 17 | ATACP5, ATPAP17, purple acid phosphatase 17 |
-0.51 | 0.34 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
91 | C0247 | Sulfoquinovosyldiacylglycerol-34:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.81 | 0.5 | -0.48 | ||
92 | C0251 | Sulfoquinovosyldiacylglycerol-36:6 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | 0.81 | 0.49 | -0.48 | ||
93 | C0199 | Phosphatidylethanolamine-36:6 | - | Phosphatidylethanolamine-36:6 | phospholipid biosynthesis II, linoleate biosynthesis I, phosphatidylethanolamine biosynthesis I, phosphatidylethanolamine biosynthesis II, glutathione redox reactions I |
0.76 | 0.52 | -0.51 | ||
94 | C0175 | MST_2379.9 | - | - | - | -0.75 | 0.45 | -0.47 | ||
95 | C0165 | MST_1688.6 | - | - | - | -0.75 | 0.44 | -0.47 | ||
96 | C0164 | MST_1596.8 | - | - | - | -0.74 | 0.44 | -0.48 | ||
97 | C0085 | Digalactosyldiacylglycerol-36:6 | - | Digalactosyldiacylglycerol-36:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.73 | 0.51 | -0.49 | ||
98 | C0084 | Digalactosyldiacylglycerol-36:5 | - | Digalactosyldiacylglycerol-36:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.73 | 0.47 | -0.48 | ||
99 | C0160 | MST_1509.5 | - | - | - | -0.72 | 0.44 | -0.5 | ||
100 | C0161 | MST_1566.3 | - | - | - | -0.71 | 0.49 | -0.5 | ||
101 | C0163 | MST_1589.2 | - | - | - | -0.71 | 0.45 | -0.46 | ||
102 | C0023 | 1,6-Anhydro-β-glucose | 1,6-Anhydro-β-D-glucose | Levoglucosan | - | -0.69 | 0.47 | -0.45 | ||
103 | C0208 | Phosphatidylinositol-34:2 | - | Phosphatidylinositol-34:2 | 3-phosphoinositide biosynthesis, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, sphingolipid biosynthesis, linoleate biosynthesis I, cutin biosynthesis, glycerophosphodiester degradation, phosphate acquisition, glutathione redox reactions I |
0.68 | 0.49 | -0.5 | ||
104 | C0028 | 3-Aminopiperidin-2-one | (R,S)-3-Aminopiperidin-2-one | - | - | -0.67 | 0.31 | -0.33 | ||
105 | C0060 | Asparagine | D,L-Asparagine | L-Asparagine | asparagine degradation I, asparagine biosynthesis III (tRNA-dependent), asparagine biosynthesis I, tRNA charging, cyanide detoxification II |
-0.66 | 0.33 | -0.31 | ||
106 | C0083 | Digalactosyldiacylglycerol-36:4 | - | Digalactosyldiacylglycerol-36:4 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.63 | 0.51 | -0.5 | ||
107 | C0082 | Digalactosyldiacylglycerol-36:3 | - | Digalactosyldiacylglycerol-36:3 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
0.61 | 0.51 | -0.5 | ||
108 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
-0.56 | 0.31 | -0.33 | ||
109 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | -0.51 | 0.3 | -0.34 |