AT3G06810 : IBA-RESPONSE 3
Query Information
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AGICode AT3G06810
Description acyl-CoA dehydrogenase-related
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 1 0.3 -0.33
2 AT5G65750 2-oxoglutarate dehydrogenase, E1 component 0.84 0.34 -0.31
3 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 0.83 0.31 -0.29
4 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 0.82 0.32 -0.34
5 AT1G55090 carbon-nitrogen hydrolase family protein 0.81 0.31 -0.31
6 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.81 0.32 -0.3
7 AT1G04240 AUX/IAA transcriptional regulator family protein indole-3-acetic acid inducible 3,
SHORT HYPOCOTYL 2		 -0.81 0.3 -0.33
8 AT5G40210 nodulin MtN21 /EamA-like transporter family protein 0.8 0.33 -0.32
9 AT5G52430 hydroxyproline-rich glycoprotein family protein 0.8 0.32 -0.34
10 AT5G43100 Eukaryotic aspartyl protease family protein 0.79 0.31 -0.3
11 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 0.79 0.3 -0.3
12 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 -0.78 0.33 -0.32
13 AT3G21250 multidrug resistance-associated protein 6 ATP-binding cassette C8,
ARABIDOPSIS THALIANA MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 6,
multidrug resistance-associated
protein 6		 0.78 0.31 -0.32
14 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.78 0.3 -0.3
15 AT5G04540 Myotubularin-like phosphatases II superfamily 0.78 0.31 -0.32
16 AT1G48790 associated molecule with the SH3 domain of STAM 1 associated molecule with the SH3
domain of STAM 1		 0.78 0.33 -0.3
17 AT3G63150 MIRO-related GTP-ase 2 CALCIUM BINDING GTP-ASE,
MIRO-related GTP-ase 2		 0.78 0.32 -0.31
18 AT3G62300 DOMAIN OF UNKNOWN FUNCTION 724 7 DOMAIN OF UNKNOWN FUNCTION 724 7,
DOMAIN OF UNKNOWN FUNCTION 724 7		 -0.77 0.31 -0.31
19 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 0.77 0.32 -0.33
20 AT3G11480 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ATBSMT1, BSMT1 0.77 0.31 -0.3
21 AT1G04820 tubulin alpha-4 chain TORTIFOLIA 2, tubulin alpha-4
chain		 -0.77 0.3 -0.31
22 AT1G22930 T-complex protein 11 0.77 0.31 -0.31
23 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 0.77 0.31 -0.29
24 AT5G59870 histone H2A 6 histone H2A 6 -0.77 0.31 -0.32
25 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.77 0.33 -0.32
26 AT5G66330 Leucine-rich repeat (LRR) family protein -0.76 0.32 -0.33
27 AT1G10780 F-box/RNI-like superfamily protein -0.76 0.31 -0.31
28 AT5G42870 phosphatidic acid phosphohydrolase 2 PHOSPHATIDIC ACID PHOSPHOHYDROLASE
2, phosphatidic acid
phosphohydrolase 2		 0.76 0.33 -0.32
29 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein -0.76 0.29 -0.3
30 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 -0.76 0.32 -0.29
31 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 0.76 0.3 -0.3
32 AT4G24690 ubiquitin-associated (UBA)/TS-N domain-containing protein /
octicosapeptide/Phox/Bemp1 (PB1) domain-containing protein		 Arabidopsis thaliana next to BRCA1
gene 1, next to BRCA1 gene 1		 0.76 0.34 -0.32
33 AT1G80950 Phospholipid/glycerol acyltransferase family protein 0.76 0.31 -0.32
34 AT5G22940 FRA8 homolog FRA8 homolog -0.76 0.32 -0.31
35 AT1G69450 Early-responsive to dehydration stress protein (ERD4) 0.76 0.32 -0.31
36 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B -0.76 0.3 -0.3
37 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 -0.75 0.32 -0.32
38 AT1G13340 Regulator of Vps4 activity in the MVB pathway protein 0.75 0.31 -0.33
39 AT2G29350 senescence-associated gene 13 senescence-associated gene 13 0.75 0.34 -0.31
40 AT2G41480 Peroxidase superfamily protein 0.75 0.31 -0.32
41 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain -0.75 0.32 -0.33
42 AT5G13080 WRKY DNA-binding protein 75 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 75, WRKY
DNA-binding protein 75		 0.75 0.3 -0.31
43 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 0.74 0.31 -0.32
44 AT1G20490 AMP-dependent synthetase and ligase family protein 0.74 0.33 -0.31
45 AT3G27360 Histone superfamily protein -0.74 0.31 -0.31
46 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 0.74 0.3 -0.31
47 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 -0.74 0.31 -0.34
48 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein 0.74 0.31 -0.33
49 AT3G05360 receptor like protein 30 receptor like protein 30, receptor
like protein 30		 0.74 0.3 -0.31
50 AT5G10400 Histone superfamily protein -0.74 0.32 -0.31
51 AT4G30130 Protein of unknown function (DUF630 and DUF632) -0.74 0.33 -0.31
52 AT3G54560 histone H2A 11 histone H2A 11 -0.74 0.3 -0.3
53 AT2G38250 Homeodomain-like superfamily protein 0.74 0.33 -0.31
54 AT1G04440 casein kinase like 13 casein kinase like 13 0.73 0.3 -0.3
55 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 0.73 0.31 -0.33
56 AT4G10050 esterase/lipase/thioesterase family protein 0.73 0.33 -0.32
57 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 0.73 0.32 -0.32
58 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 0.73 0.31 -0.31
59 AT3G62590 alpha/beta-Hydrolases superfamily protein 0.73 0.32 -0.33
60 AT3G51440 Calcium-dependent phosphotriesterase superfamily protein 0.73 0.3 -0.32
61 AT5G48900 Pectin lyase-like superfamily protein -0.73 0.32 -0.35
62 AT3G25180 cytochrome P450, family 82, subfamily G, polypeptide 1 cytochrome P450, family 82,
subfamily G, polypeptide 1		 0.73 0.3 -0.32
63 AT5G07590 Transducin/WD40 repeat-like superfamily protein -0.73 0.32 -0.33
64 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 0.73 0.3 -0.33
65 AT4G39850 peroxisomal ABC transporter 1 ATP-binding cassette D1, acetate
non-utilizing 2, Arabidopsis
thaliana ATP-binding cassette D1,
COMATOSE, PEROXISOME DEFECTIVE 3,
peroxisomal ABC transporter 1		 0.73 0.31 -0.32
66 AT4G30330 Small nuclear ribonucleoprotein family protein -0.72 0.31 -0.31
67 AT3G08970 DNAJ heat shock N-terminal domain-containing protein ATERDJ3A, THERMOSENSITIVE MALE
STERILE 1		 0.72 0.35 -0.31
68 AT1G24460 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins
in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa -
70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other
Eukaryotes - 33775 (source: NCBI BLink).		 TGN-localized SYP41 interacting
protein		 0.72 0.3 -0.3
69 AT4G17180 O-Glycosyl hydrolases family 17 protein -0.72 0.29 -0.33
70 AT2G43000 NAC domain containing protein 42 NAC domain containing protein 42,
NAC domain containing protein 42		 0.72 0.33 -0.33
71 AT1G24330 ARM repeat superfamily protein 0.72 0.33 -0.32
72 AT4G13250 NAD(P)-binding Rossmann-fold superfamily protein NON-YELLOW COLORING 1 0.72 0.3 -0.31
73 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 0.72 0.32 -0.31
74 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.72 0.33 -0.31
75 AT4G16330 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.71 0.34 -0.29
76 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein 0.71 0.33 -0.35
77 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.71 0.31 -0.31
78 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 0.71 0.35 -0.32
79 AT2G25760 Protein kinase family protein 0.71 0.31 -0.31
80 AT2G16900 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.71 0.34 -0.3
81 AT5G15160 BANQUO 2 BASIC HELIX-LOOP-HELIX PROTEIN
134, BANQUO 2		 -0.71 0.3 -0.34
82 AT3G27810 myb domain protein 21 myb domain protein 21, ARABIDOPSIS
THALIANA MYB DOMAIN PROTEIN 3,
myb domain protein 21		 0.71 0.3 -0.34
83 AT1G43900 Protein phosphatase 2C family protein 0.71 0.32 -0.33
84 AT4G01430 nodulin MtN21 /EamA-like transporter family protein 0.71 0.34 -0.35
85 AT5G20885 RING/U-box superfamily protein -0.71 0.31 -0.33
86 AT3G11900 aromatic and neutral transporter 1 aromatic and neutral transporter 1 0.71 0.3 -0.32
87 AT3G49210 O-acyltransferase (WSD1-like) family protein 0.71 0.33 -0.31
88 AT2G05710 aconitase 3 aconitase 3 0.71 0.3 -0.32
89 AT1G18040 cyclin-dependent kinase D1;3 CYCLIN-DEPENDENT KINASE D1;3,
CAK2AT, cyclin-dependent kinase
D1;3		 -0.7 0.33 -0.32
90 AT2G20980 minichromosome maintenance 10 minichromosome maintenance 10 -0.7 0.33 -0.32
91 AT3G56800 calmodulin 3 CALMODULIN 3, calmodulin 3 -0.7 0.28 -0.3
92 AT2G33990 IQ-domain 9 IQ-domain 9 -0.7 0.3 -0.3
93 AT3G19515 CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5
(InterPro:IPR008383); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G23935.1); Has 546 Blast
hits to 394 proteins in 84 species: Archae - 0; Bacteria -
3; Metazoa - 210; Fungi - 15; Plants - 143; Viruses - 0;
Other Eukaryotes - 175 (source: NCBI BLink).		 -0.7 0.31 -0.32
94 AT5G41060 DHHC-type zinc finger family protein -0.7 0.35 -0.31
95 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 -0.69 0.3 -0.33
96 AT5G66850 mitogen-activated protein kinase kinase kinase 5 mitogen-activated protein kinase
kinase kinase 5		 -0.69 0.33 -0.32
97 AT4G14960 Tubulin/FtsZ family protein TUA6 -0.69 0.35 -0.31
98 AT1G63650 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 ATMYC-2, EGL1, ENHANCER OF GLABRA
3		 -0.69 0.3 -0.3
99 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 -0.69 0.32 -0.3
100 AT1G48610 AT hook motif-containing protein -0.69 0.29 -0.31
101 AT4G31360 selenium binding -0.69 0.32 -0.3
102 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 -0.69 0.32 -0.32
103 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 -0.69 0.33 -0.31
104 AT5G23420 high-mobility group box 6 high-mobility group box 6 -0.69 0.31 -0.33
105 AT1G29510 SAUR-like auxin-responsive protein family SMALL AUXIN UPREGULATED 68 -0.69 0.32 -0.32
106 AT1G29500 SAUR-like auxin-responsive protein family -0.69 0.32 -0.32
107 AT2G04780 FASCICLIN-like arabinoogalactan 7 FASCICLIN-like arabinoogalactan 7 -0.69 0.31 -0.34
108 AT1G75840 RAC-like GTP binding protein 5 RAC-like GTP binding protein 5,
ARABIDOPSIS THALIANA
GERANYLGERANYLATED PROTEIN 3,
RHO-LIKE GTP BINDING PROTEIN 4,
RHO-LIKE GTP BINDING PROTEIN 4		 -0.68 0.3 -0.34
109 AT3G55005 tonneau 1b (TON1b) tonneau 1b -0.68 0.31 -0.31
110 AT1G49230 RING/U-box superfamily protein -0.68 0.32 -0.3
111 AT2G39880 myb domain protein 25 myb domain protein 25, myb domain
protein 25		 -0.68 0.3 -0.31
112 AT3G02640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits
to 96 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.68 0.3 -0.32
113 AT5G16480 Phosphotyrosine protein phosphatases superfamily protein AtPFA-DSP5, plant and fungi
atypical dual-specificity
phosphatase 5		 -0.67 0.31 -0.32
114 AT1G02740 MRG family protein -0.67 0.31 -0.3
115 AT5G66750 chromatin remodeling 1 ATDDM1, CHA1, CHROMATIN REMODELING
1, chromatin remodeling 1,
DECREASED DNA METHYLATION 1,
SOMNIFEROUS 1, SOM4		 -0.67 0.32 -0.32
116 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F -0.67 0.29 -0.32
117 AT4G22010 SKU5 similar 4 SKU5 similar 4 -0.67 0.31 -0.31
118 AT1G70830 MLP-like protein 28 MLP-like protein 28 -0.67 0.36 -0.33
119 AT3G18780 actin 2 actin 2, DEFORMED ROOT HAIRS 1,
ENHANCER OF LRX1 2, FRIZZY AND
KINKED SHOOTS 2, LIGHT
STRESS-REGULATED 2		 -0.67 0.32 -0.31
120 AT3G58690 Protein kinase superfamily protein -0.67 0.3 -0.31
121 AT2G39900 GATA type zinc finger transcription factor family protein WLIM2a -0.67 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.79 0.46 -0.45 C0220
123 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		-0.75 0.45 -0.43 C0118