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| AGICode | AT3G04130 |
| Description | Tetratricopeptide repeat (TPR)-like superfamily protein |
Gene information
| Gene Code | Description / Information | Gene name | Correlation | link | ||||
|---|---|---|---|---|---|---|---|---|
| pcc | 2.5% | 97.5% | PPI | |||||
| 1 | AT3G04130 | Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | 0.3 | -0.3 |
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| 2 | AT5G23050 | acyl-activating enzyme 17 | acyl-activating enzyme 17 | -0.81 | 0.32 | -0.34 |
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| 3 | AT4G13940 | S-adenosyl-L-homocysteine hydrolase | S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1, EMBRYO DEFECTIVE 1395, HOMOLOGY-DEPENDENT GENE SILENCING 1, MATERNAL EFFECT EMBRYO ARREST 58, S-ADENOSYL-L-HOMOCYSTEIN HYDROLASE 1 |
0.81 | 0.32 | -0.29 |
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| 4 | AT5G03740 | histone deacetylase 2C | histone deacetylase 2C, HISTONE DEACETYLASE 3 |
0.76 | 0.3 | -0.31 |
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| 5 | AT2G17670 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.76 | 0.3 | -0.31 |
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| 6 | AT4G34910 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.75 | 0.31 | -0.32 |
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| 7 | AT3G53950 | glyoxal oxidase-related protein | -0.74 | 0.32 | -0.31 |
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| 8 | AT2G16500 | arginine decarboxylase 1 | arginine decarboxylase 1, ARGDC, ARGDC1, SPE1 |
0.73 | 0.3 | -0.32 |
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| 9 | AT1G53035 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15358.1); Has 49 Blast hits to 49 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.72 | 0.3 | -0.31 |
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| 10 | AT5G48970 | Mitochondrial substrate carrier family protein | 0.72 | 0.32 | -0.29 |
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| 11 | AT5G16800 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.72 | 0.32 | -0.33 |
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| 12 | AT2G38770 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
EMBRYO DEFECTIVE 2765 | 0.71 | 0.31 | -0.31 |
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| 13 | AT5G39900 | Small GTP-binding protein | 0.71 | 0.32 | -0.36 |
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| 14 | AT5G23880 | cleavage and polyadenylation specificity factor 100 | CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 100, cleavage and polyadenylation specificity factor 100, EMBRYO DEFECTIVE 1265, ENHANCED SILENCING PHENOTYPE 5 |
0.7 | 0.31 | -0.33 |
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| 15 | AT3G26850 | histone-lysine N-methyltransferases | 0.7 | 0.31 | -0.32 |
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| 16 | AT5G37670 | HSP20-like chaperones superfamily protein | -0.7 | 0.29 | -0.3 |
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| 17 | AT5G66820 | unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
0.7 | 0.33 | -0.31 |
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| 18 | AT4G33960 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G15830.1); Has 32 Blast hits to 32 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.69 | 0.3 | -0.3 |
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| 19 | AT2G40780 | Nucleic acid-binding, OB-fold-like protein | 0.69 | 0.32 | -0.32 |
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| 20 | AT3G26370 | O-fucosyltransferase family protein | 0.67 | 0.33 | -0.31 |
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| 21 | AT3G52060 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.67 | 0.34 | -0.3 |
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| 22 | AT2G32080 | purin-rich alpha 1 | purin-rich alpha 1 | -0.65 | 0.32 | -0.31 |
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| 23 | AT3G26510 | Octicosapeptide/Phox/Bem1p family protein | -0.64 | 0.28 | -0.34 |
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| 24 | AT4G20820 | FAD-binding Berberine family protein | -0.64 | 0.3 | -0.32 |
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| 25 | AT1G54230 | Winged helix-turn-helix transcription repressor DNA-binding | -0.64 | 0.32 | -0.33 |
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| 26 | AT2G45170 | AUTOPHAGY 8E | AUTOPHAGY 8E, AUTOPHAGY 8E | -0.58 | 0.3 | -0.31 |
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| 27 | AT1G21640 | NAD kinase 2 | NAD KINASE 2, NAD kinase 2 | -0.57 | 0.32 | -0.33 |
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| 28 | AT5G09340 | Ubiquitin family protein | -0.56 | 0.32 | -0.3 |
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Metabolite information
| CID | Metabolite name | Pathway Information | Correlation | link | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
| 29 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
-0.64 | 0.42 | -0.44 |
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