AT3G02920 : ATRPA32B
Query Information
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AGICode AT3G02920
Description Replication protein A, subunit RPA32
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G02920 Replication protein A, subunit RPA32 ATRPA32B, RPA32B 1 0.3 -0.32
2 AT2G30200 catalytics;transferases;[acyl-carrier-protein]
S-malonyltransferases;binding		 EMBRYO DEFECTIVE 3147 0.87 0.34 -0.3
3 AT5G46280 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 3 0.87 0.32 -0.32
4 AT1G30690 Sec14p-like phosphatidylinositol transfer family protein 0.87 0.33 -0.32
5 AT5G59870 histone H2A 6 histone H2A 6 0.87 0.33 -0.31
6 AT3G54560 histone H2A 11 histone H2A 11 0.86 0.28 -0.33
7 AT3G17250 Protein phosphatase 2C family protein -0.85 0.31 -0.31
8 AT2G24490 replicon protein A2 ATRPA2, ATRPA32A, SUPPRESSOR OF
ROS1, replicon protein A2, RPA32A		 0.85 0.3 -0.32
9 AT5G45700 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 0.85 0.32 -0.3
10 AT1G10780 F-box/RNI-like superfamily protein 0.84 0.32 -0.31
11 AT5G35370 S-locus lectin protein kinase family protein -0.84 0.31 -0.31
12 AT1G72610 germin-like protein 1 A. THALIANA GERMIN-LIKE PROTEIN 1,
germin-like protein 1, GERMIN-LIKE
PROTEIN 1		 0.84 0.29 -0.32
13 AT5G08020 RPA70-kDa subunit B ARABIDOPSIS THALIANA RPA70-KDA
SUBUNIT B, RPA70-kDa subunit B		 0.84 0.32 -0.33
14 AT1G26930 Galactose oxidase/kelch repeat superfamily protein -0.83 0.32 -0.31
15 AT3G27360 Histone superfamily protein 0.83 0.31 -0.31
16 AT1G18260 HCP-like superfamily protein EMS-mutagenized bri1 suppressor 5,
HRD3A		 -0.83 0.33 -0.29
17 AT5G16450 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.83 0.32 -0.3
18 AT5G10390 Histone superfamily protein 0.83 0.32 -0.35
19 AT2G45970 cytochrome P450, family 86, subfamily A, polypeptide 8 cytochrome P450, family 86,
subfamily A, polypeptide 8,
LACERATA		 0.83 0.3 -0.3
20 AT5G65360 Histone superfamily protein 0.83 0.32 -0.3
21 AT2G24590 RNA recognition motif and CCHC-type zinc finger domains
containing protein		 RS-containing zinc finger protein
22a, RS-containing zinc finger
protein 22a		 0.83 0.32 -0.31
22 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.82 0.32 -0.32
23 AT1G20490 AMP-dependent synthetase and ligase family protein -0.82 0.32 -0.31
24 AT1G21880 lysm domain GPI-anchored protein 1 precursor lysm domain GPI-anchored protein 1
precursor		 0.82 0.29 -0.32
25 AT1G04440 casein kinase like 13 casein kinase like 13 -0.82 0.31 -0.31
26 AT5G27720 Small nuclear ribonucleoprotein family protein embryo defective 1644, SM-like
protein 4		 0.82 0.33 -0.29
27 AT1G24360 NAD(P)-binding Rossmann-fold superfamily protein 0.82 0.32 -0.3
28 AT5G51550 EXORDIUM like 3 EXORDIUM like 3 0.82 0.31 -0.31
29 AT4G31240 protein kinase C-like zinc finger protein -0.82 0.31 -0.32
30 AT1G18090 5'-3' exonuclease family protein 0.82 0.3 -0.32
31 AT4G03100 Rho GTPase activating protein with PAK-box/P21-Rho-binding
domain		 0.82 0.29 -0.3
32 AT2G29550 tubulin beta-7 chain tubulin beta-7 chain 0.82 0.31 -0.34
33 AT3G10610 Ribosomal S17 family protein 0.82 0.33 -0.3
34 AT1G79690 nudix hydrolase homolog 3 nudix hydrolase homolog 3, nudix
hydrolase homolog 3		 -0.82 0.29 -0.31
35 AT5G62210 Embryo-specific protein 3, (ATS3) 0.81 0.32 -0.33
36 AT5G55120 galactose-1-phosphate guanylyltransferase
(GDP)s;GDP-D-glucose phosphorylases;quercetin
4'-O-glucosyltransferases		 VITAMIN C DEFECTIVE 5 -0.81 0.31 -0.33
37 AT1G20560 acyl activating enzyme 1 acyl activating enzyme 1 -0.81 0.33 -0.31
38 AT1G17490 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G72690.1); Has 57 Blast hits
to 45 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 57; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.81 0.32 -0.31
39 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 0.81 0.32 -0.31
40 AT5G19570 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0546
(InterPro:IPR018908); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 0.81 0.32 -0.32
41 AT3G16857 response regulator 1 response regulator 1, response
regulator 1		 -0.81 0.32 -0.32
42 AT5G47630 mitochondrial acyl carrier protein 3 mitochondrial acyl carrier protein
3		 0.81 0.33 -0.31
43 AT1G22930 T-complex protein 11 -0.81 0.31 -0.3
44 AT5G05000 translocon at the outer envelope membrane of chloroplasts
34		 ARABIDOPSIS THALIANA TRANSLOCON AT
THE OUTER ENVELOPE MEMBRANE OF
CHLOROPLASTS 34, OEP34, translocon
at the outer envelope membrane of
chloroplasts 34		 0.81 0.3 -0.34
45 AT5G15050 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.81 0.32 -0.31
46 AT3G52850 vacuolar sorting receptor homolog 1 ARABIDOPSIS THALIANA EPIDERMAL
GROWTH FACTOR RECEPTOR-LIKE
PROTEIN, ATELP1, ATVSR1, BP-80,
BP80, binding protein of 80 kDa
1;1, BP80B, Green fluorescent seed
1, vacuolar sorting receptor
homolog 1, VACUOLAR SORTING
RECEPTOR 1;1		 -0.81 0.32 -0.34
47 AT3G02875 Peptidase M20/M25/M40 family protein IAA-LEUCINE RESISTANT 1 -0.81 0.32 -0.32
48 AT1G69450 Early-responsive to dehydration stress protein (ERD4) -0.81 0.31 -0.31
49 AT4G24520 P450 reductase 1 ARABIDOPSIS CYTOCHROME REDUCTASE,
P450 reductase 1		 -0.81 0.32 -0.32
50 AT3G13740 Ribonuclease III family protein 0.81 0.32 -0.31
51 AT2G47600 magnesium/proton exchanger magnesium/proton exchanger,
ATMHX1, magnesium/proton
exchanger, MAGNESIUM/PROTON
EXCHANGER 1		 -0.8 0.32 -0.33
52 AT4G28310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.8 0.31 -0.32
53 AT1G17020 senescence-related gene 1 SENESCENCE-RELATED GENE 1,
senescence-related gene 1		 -0.8 0.3 -0.33
54 AT2G45470 FASCICLIN-like arabinogalactan protein 8 ARABINOGALACTAN PROTEIN 8,
FASCICLIN-like arabinogalactan
protein 8		 0.8 0.29 -0.3
55 AT1G03080 kinase interacting (KIP1-like) family protein -0.8 0.33 -0.32
56 AT3G42660 transducin family protein / WD-40 repeat family protein 0.8 0.33 -0.33
57 AT5G65750 2-oxoglutarate dehydrogenase, E1 component -0.8 0.32 -0.31
58 AT3G62840 Small nuclear ribonucleoprotein family protein 0.8 0.3 -0.32
59 AT5G22880 histone B2 HISTONE H2B, histone B2 0.8 0.31 -0.31
60 AT5G41060 DHHC-type zinc finger family protein 0.8 0.32 -0.33
61 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.79 0.32 -0.32
62 AT2G35960 NDR1/HIN1-like 12 NDR1/HIN1-like 12 0.79 0.32 -0.32
63 AT2G47950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root, flower; EXPRESSED
DURING: petal differentiation and expansion stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G62990.1); Has 22 Blast hits to 22 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.79 0.31 -0.32
64 AT1G75990 PAM domain (PCI/PINT associated module) protein 0.79 0.33 -0.32
65 AT5G46180 ornithine-delta-aminotransferase ornithine-delta-aminotransferase -0.79 0.3 -0.31
66 AT1G21540 AMP-dependent synthetase and ligase family protein 0.79 0.3 -0.34
67 AT1G76150 enoyl-CoA hydratase 2 ATECH2, enoyl-CoA hydratase 2 -0.79 0.34 -0.32
68 AT5G10400 Histone superfamily protein 0.79 0.31 -0.31
69 AT1G48610 AT hook motif-containing protein 0.79 0.33 -0.34
70 AT2G07690 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 5 0.79 0.33 -0.32
71 AT1G19270 DA1 DA1 -0.79 0.29 -0.33
72 AT1G09630 RAB GTPase 11C ARABIDOPSIS RAB GTPASE A2A, RAB
GTPase 11C, ARABIDOPSIS RAB GTPASE
A2A, RAB GTPASE A2A, RAB GTPase
11C		 0.79 0.31 -0.31
73 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 -0.79 0.34 -0.33
74 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 -0.79 0.33 -0.32
75 AT1G27460 no pollen germination related 1 no pollen germination related 1 0.78 0.32 -0.31
76 AT1G52670 Single hybrid motif superfamily protein 0.78 0.32 -0.34
77 AT2G03780 Translin family protein 0.78 0.31 -0.29
78 AT3G51000 alpha/beta-Hydrolases superfamily protein -0.78 0.33 -0.31
79 AT1G76390 ARM repeat superfamily protein plant U-box 43 -0.78 0.31 -0.31
80 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.78 0.31 -0.31
81 AT3G62220 Protein kinase superfamily protein 0.78 0.3 -0.32
82 AT2G41480 Peroxidase superfamily protein -0.78 0.31 -0.33
83 AT4G15330 cytochrome P450, family 705, subfamily A, polypeptide 1 cytochrome P450, family 705,
subfamily A, polypeptide 1		 -0.78 0.31 -0.33
84 AT1G17830 Protein of unknown function (DUF789) -0.78 0.31 -0.29
85 AT5G43080 Cyclin A3;1 Cyclin A3;1 0.78 0.3 -0.32
86 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.78 0.33 -0.31
87 AT5G42810 inositol-pentakisphosphate 2-kinase 1 inositol-pentakisphosphate
2-kinase 1,
inositol-pentakisphosphate
2-kinase 1		 -0.77 0.33 -0.31
88 AT1G63440 heavy metal atpase 5 heavy metal atpase 5 -0.77 0.31 -0.31
89 AT4G33400 Vacuolar import/degradation, Vid27-related protein 0.77 0.31 -0.29
90 AT4G18060 SH3 domain-containing protein 0.77 0.31 -0.31
91 AT2G35650 cellulose synthase like cellulose synthase like, ATCSLA7,
CSLA07, cellulose synthase like,
CELLULOSE SYNTHASE LIKE A7		 0.77 0.32 -0.33
92 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.77 0.3 -0.29
93 AT1G31120 K+ uptake permease 10 K+ uptake permease 10 -0.77 0.32 -0.33
94 AT1G19680 RING/U-box superfamily protein -0.77 0.31 -0.3
95 AT1G34430 2-oxoacid dehydrogenases acyltransferase family protein embryo defective 3003 0.77 0.33 -0.31
96 AT3G51440 Calcium-dependent phosphotriesterase superfamily protein -0.77 0.34 -0.3
97 AT1G70300 K+ uptake permease 6 K+ uptake permease 6 -0.77 0.33 -0.31
98 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 -0.77 0.3 -0.3
99 AT5G24330 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 6 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 6, SET DOMAIN PROTEIN 34		 0.77 0.32 -0.35
100 AT5G57150 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.77 0.33 -0.31
101 AT2G37760 NAD(P)-linked oxidoreductase superfamily protein Aldo-keto reductase family 4
member C8		 -0.77 0.31 -0.32
102 AT1G74920 aldehyde dehydrogenase 10A8 aldehyde dehydrogenase 10A8 -0.76 0.32 -0.3
103 AT3G06810 acyl-CoA dehydrogenase-related IBA-RESPONSE 3 -0.76 0.3 -0.3
104 AT5G17860 calcium exchanger 7 calcium exchanger 7 -0.76 0.33 -0.35
105 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.76 0.31 -0.3
106 AT3G30390 Transmembrane amino acid transporter family protein -0.76 0.31 -0.31
107 AT1G78670 gamma-glutamyl hydrolase 3 gamma-glutamyl hydrolase 3,
gamma-glutamyl hydrolase 3		 -0.76 0.31 -0.31
108 AT5G42850 Thioredoxin superfamily protein -0.76 0.29 -0.3
109 AT5G15730 Protein kinase superfamily protein AtCRLK2,
calcium/calmodulin-regulated
receptor-like kinase 2		 -0.76 0.31 -0.29
110 AT5G02170 Transmembrane amino acid transporter family protein -0.76 0.31 -0.33
111 AT1G30270 CBL-interacting protein kinase 23 ATCIPK23, CBL-interacting protein
kinase 23, LOW-K+-SENSITIVE 1,
SOS2-like protein kinase 17,
SNF1-RELATED PROTEIN KINASE 3.23		 -0.76 0.31 -0.29
112 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.76 0.32 -0.32
113 AT1G26730 EXS (ERD1/XPR1/SYG1) family protein -0.75 0.33 -0.31
114 AT1G08460 histone deacetylase 8 ATHDA8, histone deacetylase 8,
HISTONE DEACETYLASE 8		 -0.75 0.35 -0.3
115 AT1G23040 hydroxyproline-rich glycoprotein family protein -0.75 0.31 -0.33
116 AT4G27860 vacuolar iron transporter (VIT) family protein -0.75 0.3 -0.32
117 AT2G40200 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.75 0.32 -0.31
118 AT1G61120 terpene synthase 04 GERANYLLINALOOL SYNTHASE, terpene
synthase 04, TERPENE SYNTHASE 4		 -0.75 0.33 -0.35
119 AT5G24160 squalene monoxygenase 6 squalene monoxygenase 6 -0.75 0.33 -0.31
120 AT1G77420 alpha/beta-Hydrolases superfamily protein -0.75 0.31 -0.32
121 AT1G54030 GDSL-like Lipase/Acylhydrolase superfamily protein GOLGI DEFECTS 36, MODIFIED VACUOLE
PHENOTYPE 1		 -0.75 0.32 -0.33
122 AT1G55020 lipoxygenase 1 ARABIDOPSIS LIPOXYGENASE 1,
lipoxygenase 1		 -0.75 0.32 -0.31
123 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 -0.75 0.32 -0.31
124 AT5G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11600.1); Has 136 Blast hits
to 136 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.31 -0.33
125 AT5G18780 F-box/RNI-like superfamily protein -0.75 0.35 -0.32
126 AT3G22460 O-acetylserine (thiol) lyase (OAS-TL) isoform A2 O-acetylserine (thiol) lyase
(OAS-TL) isoform A2		 -0.74 0.33 -0.31
127 AT1G06180 myb domain protein 13 myb domain protein 13, ATMYBLFGN,
myb domain protein 13		 -0.74 0.33 -0.31
128 AT1G72800 RNA-binding (RRM/RBD/RNP motifs) family protein -0.74 0.32 -0.31
129 AT2G02970 GDA1/CD39 nucleoside phosphatase family protein -0.74 0.29 -0.34
130 AT4G10050 esterase/lipase/thioesterase family protein -0.74 0.34 -0.32
131 AT3G26100 Regulator of chromosome condensation (RCC1) family protein -0.74 0.32 -0.31
132 AT2G36950 Heavy metal transport/detoxification superfamily protein -0.74 0.3 -0.31
133 AT4G15530 pyruvate orthophosphate dikinase pyruvate orthophosphate dikinase -0.74 0.32 -0.32
134 AT3G04520 threonine aldolase 2 threonine aldolase 2 -0.74 0.3 -0.29
135 AT5G58730 pfkB-like carbohydrate kinase family protein -0.73 0.32 -0.32
136 AT3G21250 multidrug resistance-associated protein 6 ATP-binding cassette C8,
ARABIDOPSIS THALIANA MULTIDRUG
RESISTANCE-ASSOCIATED PROTEIN 6,
multidrug resistance-associated
protein 6		 -0.73 0.32 -0.3
137 AT1G69880 thioredoxin H-type 8 thioredoxin H-type 8, thioredoxin
H-type 8		 -0.73 0.32 -0.32
138 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.73 0.33 -0.32
139 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 -0.73 0.32 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
140 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.76 0.45 -0.47 C0220