AT3G03160 : -
Query Information
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AGICode AT3G03160
Description FUNCTIONS IN: molecular_function unknown; INVOLVED IN: intracellular protein transport; LOCATED IN: endomembrane system, integral to membrane, endoplasmic reticulum; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: B-cell receptor-associated 31-like (InterPro:IPR008417); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT3G03160 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G17190.1); Has 102 Blast hits to 102 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 102; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.32 -0.31
2 AT4G13210 Pectin lyase-like superfamily protein 0.78 0.33 -0.31
3 AT4G29390 Ribosomal protein S30 family protein 0.77 0.32 -0.32
4 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.76 0.33 -0.34
5 AT3G63130 RAN GTPase activating protein 1 RAN GTPASE-ACTIVATING PROTEIN 1,
RAN GTPase activating protein 1		 0.75 0.33 -0.33
6 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.74 0.3 -0.3
7 AT1G78150 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G35780.1); Has 152 Blast hits
to 146 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 149; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.74 0.29 -0.31
8 AT2G20810 galacturonosyltransferase 10 galacturonosyltransferase 10, LGT4 0.73 0.32 -0.32
9 AT4G02120 CTP synthase family protein -0.71 0.33 -0.33
10 AT2G43770 Transducin/WD40 repeat-like superfamily protein 0.71 0.34 -0.32
11 AT3G01320 SIN3-like 1 SIN3-like 1 -0.71 0.3 -0.32
12 AT4G31280 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.71 0.32 -0.32
13 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.71 0.3 -0.32
14 AT4G32390 Nucleotide-sugar transporter family protein 0.71 0.3 -0.33
15 AT5G55940 Uncharacterised protein family (UPF0172) embryo defective 2731 0.71 0.33 -0.3
16 AT2G22910 N-acetyl-l-glutamate synthase 1 N-acetyl-l-glutamate synthase 1 -0.7 0.35 -0.32
17 AT3G18030 HAL3-like protein A ATHAL3, ARABIDOPSIS THALIANA
HAL3-LIKE PROTEIN A, HALOTOLERANCE
DETERMINANT 3, HAL3-like protein A		 0.7 0.3 -0.32
18 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 0.7 0.33 -0.3
19 AT3G46020 RNA-binding (RRM/RBD/RNP motifs) family protein 0.7 0.31 -0.32
20 AT4G16515 Encodes a root meristem growth factor (RGF). Belongs to a
family of functionally redundant homologous peptides that
are secreted, tyrosine-sulfated, and expressed mainly in
the stem cell area and the innermost layer of central
columella cells. RGFs are required for maintenance of the
root stem cell niche and transit amplifying cell
proliferation. Members of this family include: At5g60810
(RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350
(RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240
(RGF7), At2g03830 (RGF8) and At5g64770 (RGF9).		 root meristem growth factor 6 0.7 0.32 -0.31
21 AT1G32190 alpha/beta-Hydrolases superfamily protein 0.69 0.28 -0.31
22 AT4G22300 carboxylesterases SUPPRESSOR OF AVRBST-ELICITED
RESISTANCE 1		 0.69 0.33 -0.35
23 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109		 0.69 0.32 -0.33
24 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 -0.69 0.29 -0.32
25 AT4G39860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G22270.1); Has 152 Blast hits
to 146 proteins in 19 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 2; Plants - 146; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.69 0.32 -0.31
26 AT5G49460 ATP citrate lyase subunit B 2 ATP citrate lyase subunit B 2 0.69 0.31 -0.31
27 AT5G06930 LOCATED IN: chloroplast; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 7 growth stages; BEST Arabidopsis
thaliana protein match is: nucleolar protein gar2-related
(TAIR:AT2G42320.2); Has 3369 Blast hits to 1526 proteins in
313 species: Archae - 2; Bacteria - 910; Metazoa - 754;
Fungi - 336; Plants - 137; Viruses - 11; Other Eukaryotes -
1219 (source: NCBI BLink).		 0.68 0.35 -0.28
28 AT2G17975 zinc finger (Ran-binding) family protein -0.68 0.31 -0.35
29 AT4G22250 RING/U-box superfamily protein 0.68 0.32 -0.3
30 AT5G66280 GDP-D-mannose 4,6-dehydratase 1 GDP-D-mannose 4,6-dehydratase 1 0.68 0.32 -0.32
31 AT5G13520 peptidase M1 family protein 0.68 0.32 -0.32
32 AT5G39320 UDP-glucose 6-dehydrogenase family protein 0.68 0.31 -0.31
33 AT5G64200 ortholog of human splicing factor SC35 ortholog of human splicing factor
SC35, ARABIDOPSIS THALIANA
ORTHOLOG OF HUMAN SPLICING FACTOR
SC35, ortholog of human splicing
factor SC35		 0.68 0.34 -0.31
34 AT5G57530 xyloglucan endotransglucosylase/hydrolase 12 AtXTH12, xyloglucan
endotransglucosylase/hydrolase 12		 0.68 0.31 -0.3
35 AT1G07615 GTP-binding protein Obg/CgtA 0.67 0.3 -0.33
36 AT1G13690 ATPase E1 ATPase E1 0.67 0.32 -0.3
37 AT1G78100 F-box family protein auxin up-regulated f-box protein 1 0.67 0.31 -0.29
38 AT5G02260 expansin A9 ATEXP9, expansin A9, ATHEXP ALPHA
1.10, EXP9, expansin A9		 0.66 0.33 -0.33
39 AT3G29390 RS2-interacting KH protein RS2-interacting KH protein -0.66 0.29 -0.32
40 AT5G14240 Thioredoxin superfamily protein 0.66 0.31 -0.31
41 AT1G49240 actin 8 actin 8, FRIZZY AND KINKED SHOOTS 0.66 0.31 -0.31
42 AT3G08630 Protein of unknown function (DUF3411) 0.66 0.33 -0.31
43 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.66 0.34 -0.33
44 AT2G17560 high mobility group B4 high mobility group B4, NFD04,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR D4		 0.66 0.29 -0.3
45 AT1G05790 lipase class 3 family protein -0.66 0.31 -0.3
46 AT1G78130 Major facilitator superfamily protein unfertilized embryo sac 2 -0.66 0.32 -0.33
47 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.66 0.3 -0.3
48 AT3G11500 Small nuclear ribonucleoprotein family protein 0.65 0.31 -0.32
49 AT1G09550 Pectinacetylesterase family protein -0.65 0.35 -0.32
50 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.65 0.3 -0.31
51 AT2G43260 F-box and associated interaction domains-containing protein 0.65 0.33 -0.32
52 AT4G03190 GRR1-like protein 1 AUXIN SIGNALING F BOX PROTEIN 1,
ATGRH1, GRR1-like protein 1		 0.65 0.32 -0.34
53 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.65 0.33 -0.33
54 AT4G04150 transposable element gene -0.65 0.3 -0.3
55 AT2G23430 Cyclin-dependent kinase inhibitor family protein ICK1, KIP-RELATED PROTEIN 1 -0.65 0.33 -0.3
56 AT2G40620 Basic-leucine zipper (bZIP) transcription factor family
protein		 0.64 0.31 -0.29
57 AT3G50080 VIER F-box proteine 2 VIER F-box proteine 2 -0.64 0.32 -0.32
58 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 -0.64 0.31 -0.3
59 AT5G19790 related to AP2 11 related to AP2 11 0.64 0.3 -0.32
60 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 -0.64 0.31 -0.32
61 AT5G02550 unknown protein; Has 3 Blast hits to 3 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.32 -0.32
62 AT5G28640 SSXT family protein ANGUSTIFOLIA 3, ARABIDOPSIS
GRF1-INTERACTING FACTOR 1,
GRF1-INTERACTING FACTOR,
GRF1-INTERACTING FACTOR 1		 0.64 0.31 -0.33
63 AT3G08020 PHD finger family protein -0.64 0.32 -0.31
64 AT3G50430 unknown protein; Has 54 Blast hits to 54 proteins in 22
species: Archae - 0; Bacteria - 0; Metazoa - 29; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.63 0.34 -0.3
65 AT3G07400 lipase class 3 family protein -0.63 0.31 -0.31
66 AT5G12040 Nitrilase/cyanide hydratase and apolipoprotein
N-acyltransferase family protein		 -0.63 0.33 -0.33
67 AT1G78200 Protein phosphatase 2C family protein -0.62 0.34 -0.3
68 AT4G13080 xyloglucan endotransglucosylase/hydrolase 1 xyloglucan
endotransglucosylase/hydrolase 1		 -0.62 0.31 -0.33
69 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 -0.62 0.32 -0.32
70 AT2G39580 CONTAINS InterPro DOMAIN/s: Putative zinc-finger domain
(InterPro:IPR019607); Has 249 Blast hits to 219 proteins in
85 species: Archae - 0; Bacteria - 144; Metazoa - 29; Fungi
- 8; Plants - 50; Viruses - 0; Other Eukaryotes - 18
(source: NCBI BLink).		 -0.62 0.27 -0.31
71 AT2G46560 transducin family protein / WD-40 repeat family protein -0.62 0.31 -0.31
72 AT2G14390 unknown protein; Has 294 Blast hits to 290 proteins in 73
species: Archae - 2; Bacteria - 20; Metazoa - 212; Fungi -
5; Plants - 4; Viruses - 0; Other Eukaryotes - 51 (source:
NCBI BLink).		 -0.62 0.31 -0.32
73 AT1G11720 starch synthase 3 starch synthase 3, starch synthase
3		 -0.62 0.32 -0.33
74 AT2G42330 GC-rich sequence DNA-binding factor-like protein with
Tuftelin interacting domain		 -0.61 0.3 -0.3
75 AT5G24655 response to low sulfur 4 RESPONSE TO LOW SULFUR 4 -0.61 0.3 -0.32
76 AT3G25840 Protein kinase superfamily protein -0.61 0.33 -0.3
77 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 -0.61 0.31 -0.29
78 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 -0.61 0.32 -0.31
79 AT5G55310 DNA topoisomerase 1 beta TOPOISOMERASE 1, DNA topoisomerase
1 beta		 -0.61 0.31 -0.31
80 AT3G22170 far-red elongated hypocotyls 3 far-red elongated hypocotyls 3 -0.61 0.31 -0.32
81 AT1G28320 protease-related DEG15 -0.6 0.32 -0.3
82 AT2G41790 Insulinase (Peptidase family M16) family protein -0.6 0.3 -0.32
83 AT5G38120 AMP-dependent synthetase and ligase family protein 4CL8 -0.6 0.32 -0.31
84 AT3G53090 ubiquitin-protein ligase 7 ubiquitin-protein ligase 7 -0.59 0.33 -0.32
85 AT4G14180 putative recombination initiation defect 1 putative recombination initiation
defect 1, putative recombination
initiation defect 1		 -0.59 0.32 -0.33
86 AT3G42700 transposable element gene -0.59 0.32 -0.33
87 AT2G17110 Protein of unknown function (DUF630 and DUF632) -0.59 0.32 -0.32
88 AT3G28430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 17 plant structures; EXPRESSED
DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function FPL (InterPro:IPR019155); Has
243 Blast hits to 233 proteins in 101 species: Archae - 0;
Bacteria - 0; Metazoa - 110; Fungi - 0; Plants - 53;
Viruses - 0; Other Eukaryotes - 80 (source: NCBI BLink).		 -0.59 0.32 -0.34
89 AT5G16210 HEAT repeat-containing protein -0.59 0.33 -0.3
90 AT1G45160 Protein kinase superfamily protein -0.59 0.34 -0.31
91 AT1G30810 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 -0.59 0.3 -0.32
92 AT3G17920 Outer arm dynein light chain 1 protein -0.59 0.32 -0.34
93 AT4G34140 D111/G-patch domain-containing protein -0.59 0.31 -0.33
94 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 -0.59 0.31 -0.33
95 AT2G15810 transposable element gene -0.58 0.29 -0.3
96 AT4G19040 ENHANCED DISEASE RESISTANCE 2 ENHANCED DISEASE RESISTANCE 2 -0.58 0.32 -0.32
97 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 -0.58 0.31 -0.32
98 AT1G52570 phospholipase D alpha 2 phospholipase D alpha 2 -0.58 0.32 -0.34
99 ATCG00550 photosystem II reaction center protein J photosystem II reaction center
protein J		 -0.58 0.32 -0.31
100 AT2G33020 receptor like protein 24 receptor like protein 24, receptor
like protein 24		 -0.58 0.34 -0.34
101 AT2G42160 zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP
domain-containing protein 1		 -0.58 0.32 -0.32
102 AT5G09410 ethylene induced calmodulin binding protein calmodulin-binding transcription
activator 1, ethylene induced
calmodulin binding protein		 -0.58 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
103 C0193 Pantothenic acid D,L-Pantothenic acid Pantothenate pantothenate biosynthesis -0.78 0.46 -0.44 C0193
104 C0118 Hyperoside - Quercetin-3-glucoside quercetin glucoside biosynthesis (Arabidopsis),
rutin biosynthesis 		0.72 0.42 -0.44 C0118
105 C0121 Isoheptylglucosinolate - - - 0.72 0.47 -0.47
106 C0254 Threonine D,L-Threonine L-Threonine isoleucine biosynthesis I (from threonine),
glycine biosynthesis,
threonine biosynthesis from homoserine,
tRNA charging 		-0.59 0.29 -0.32 C0254