AGICode | AT3G11480 |
Description | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT3G11480 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
ATBSMT1, BSMT1 | 1 | 0.3 | -0.32 | ||
2 | AT1G52190 | Major facilitator superfamily protein | -0.87 | 0.33 | -0.31 | |||
3 | AT5G40210 | nodulin MtN21 /EamA-like transporter family protein | 0.86 | 0.3 | -0.3 | |||
4 | AT1G30400 | multidrug resistance-associated protein 1 | ATP-binding cassette C1, Arabidopsis thaliana ATP-binding cassette C1, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 1, EST1, multidrug resistance-associated protein 1 |
0.85 | 0.32 | -0.32 | ||
5 | AT3G14205 | Phosphoinositide phosphatase family protein | 0.84 | 0.3 | -0.33 | |||
6 | AT3G05970 | long-chain acyl-CoA synthetase 6 | ATLACS6, long-chain acyl-CoA synthetase 6 |
0.84 | 0.32 | -0.32 | ||
7 | AT3G21250 | multidrug resistance-associated protein 6 | ATP-binding cassette C8, ARABIDOPSIS THALIANA MULTIDRUG RESISTANCE-ASSOCIATED PROTEIN 6, multidrug resistance-associated protein 6 |
0.83 | 0.33 | -0.32 | ||
8 | AT1G04780 | Ankyrin repeat family protein | 0.83 | 0.31 | -0.32 | |||
9 | AT5G11420 | Protein of unknown function, DUF642 | -0.83 | 0.3 | -0.31 | |||
10 | AT2G18300 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.83 | 0.32 | -0.33 | |||
11 | AT1G26390 | FAD-binding Berberine family protein | 0.82 | 0.34 | -0.33 | |||
12 | AT4G39850 | peroxisomal ABC transporter 1 | ATP-binding cassette D1, acetate non-utilizing 2, Arabidopsis thaliana ATP-binding cassette D1, COMATOSE, PEROXISOME DEFECTIVE 3, peroxisomal ABC transporter 1 |
0.82 | 0.32 | -0.28 | ||
13 | AT1G69930 | glutathione S-transferase TAU 11 | glutathione S-transferase TAU 11, glutathione S-transferase TAU 11 |
0.82 | 0.31 | -0.32 | ||
14 | AT4G16980 | arabinogalactan-protein family | -0.81 | 0.31 | -0.31 | |||
15 | AT3G55640 | Mitochondrial substrate carrier family protein | 0.81 | 0.31 | -0.31 | |||
16 | AT4G18050 | P-glycoprotein 9 | ATP-binding cassette B9, P-glycoprotein 9 |
0.81 | 0.32 | -0.31 | ||
17 | AT2G40200 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.81 | 0.33 | -0.32 | |||
18 | AT5G05180 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.81 | 0.29 | -0.31 | |||
19 | AT1G68820 | Transmembrane Fragile-X-F-associated protein | 0.8 | 0.32 | -0.32 | |||
20 | AT1G16520 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast hits to 234 proteins in 69 species: Archae - 2; Bacteria - 2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
-0.8 | 0.31 | -0.3 | |||
21 | AT1G29670 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.8 | 0.32 | -0.3 | |||
22 | AT5G05000 | translocon at the outer envelope membrane of chloroplasts 34 |
ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34, OEP34, translocon at the outer envelope membrane of chloroplasts 34 |
-0.8 | 0.31 | -0.32 | ||
23 | AT3G49470 | nascent polypeptide-associated complex subunit alpha-like protein 2 |
nascent polypeptide-associated complex subunit alpha-like protein 2 |
-0.8 | 0.33 | -0.31 | ||
24 | AT1G54710 | homolog of yeast autophagy 18 (ATG18) H | homolog of yeast autophagy 18 (ATG18) H, homolog of yeast autophagy 18 (ATG18) H |
0.79 | 0.31 | -0.3 | ||
25 | AT1G70410 | beta carbonic anhydrase 4 | BETA CARBONIC ANHYDRASE 4, beta carbonic anhydrase 4, BETA CARBONIC ANHYDRASE 4 |
-0.79 | 0.31 | -0.3 | ||
26 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | 0.79 | 0.32 | -0.32 | ||
27 | AT2G29470 | glutathione S-transferase tau 3 | glutathione S-transferase tau 3, GLUTATHIONE S-TRANSFERASE 21, glutathione S-transferase tau 3 |
0.79 | 0.32 | -0.31 | ||
28 | AT5G61560 | U-box domain-containing protein kinase family protein | 0.79 | 0.33 | -0.32 | |||
29 | AT1G04680 | Pectin lyase-like superfamily protein | -0.78 | 0.32 | -0.32 | |||
30 | AT2G26780 | ARM repeat superfamily protein | 0.78 | 0.32 | -0.33 | |||
31 | AT2G15620 | nitrite reductase 1 | ARABIDOPSIS THALIANA NITRITE REDUCTASE, NITRITE REDUCTASE, nitrite reductase 1 |
-0.78 | 0.34 | -0.32 | ||
32 | AT1G09310 | Protein of unknown function, DUF538 | -0.78 | 0.31 | -0.3 | |||
33 | AT3G49490 | unknown protein; Has 722 Blast hits to 186 proteins in 64 species: Archae - 0; Bacteria - 30; Metazoa - 72; Fungi - 48; Plants - 38; Viruses - 0; Other Eukaryotes - 534 (source: NCBI BLink). |
0.78 | 0.32 | -0.3 | |||
34 | AT5G65750 | 2-oxoglutarate dehydrogenase, E1 component | 0.78 | 0.3 | -0.31 | |||
35 | AT5G11690 | translocase inner membrane subunit 17-3 | ARABIDOPSIS THALIANA TRANSLOCASE INNER MEMBRANE SUBUNIT 17-3, translocase inner membrane subunit 17-3 |
-0.78 | 0.31 | -0.31 | ||
36 | AT5G35560 | DENN (AEX-3) domain-containing protein | 0.78 | 0.31 | -0.32 | |||
37 | AT2G34660 | multidrug resistance-associated protein 2 | ATP-binding cassette C2, Arabidopsis thaliana ATP-binding cassette C2, multidrug resistance-associated protein 2, EST4, multidrug resistance-associated protein 2 |
0.78 | 0.29 | -0.29 | ||
38 | AT3G04790 | Ribose 5-phosphate isomerase, type A protein | EMBRYO DEFECTIVE 3119 | -0.77 | 0.32 | -0.34 | ||
39 | AT3G06810 | acyl-CoA dehydrogenase-related | IBA-RESPONSE 3 | 0.77 | 0.31 | -0.31 | ||
40 | AT4G33220 | pectin methylesterase 44 | A. THALIANA PECTIN METHYLESTERASE 44, pectin methylesterase 44 |
-0.77 | 0.32 | -0.32 | ||
41 | AT1G20340 | Cupredoxin superfamily protein | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 112, PLASTOCYANIN 2 |
-0.77 | 0.31 | -0.33 | ||
42 | AT4G16110 | response regulator 2 | response regulator 2, response regulator 2 |
0.77 | 0.33 | -0.31 | ||
43 | AT4G00400 | glycerol-3-phosphate acyltransferase 8 | AtGPAT8, glycerol-3-phosphate acyltransferase 8 |
-0.77 | 0.31 | -0.34 | ||
44 | AT5G03905 | Iron-sulphur cluster biosynthesis family protein | 0.77 | 0.33 | -0.32 | |||
45 | AT4G22980 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: Pyridoxal phosphate (PLP)-dependent transferases superfamily protein (TAIR:AT5G51920.1); Has 520 Blast hits to 468 proteins in 130 species: Archae - 5; Bacteria - 23; Metazoa - 99; Fungi - 131; Plants - 231; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink). |
0.77 | 0.3 | -0.31 | |||
46 | AT4G00400 | glycerol-3-phosphate acyltransferase 8 | AtGPAT8, glycerol-3-phosphate acyltransferase 8 |
-0.76 | 0.32 | -0.31 | ||
47 | AT1G18470 | Transmembrane Fragile-X-F-associated protein | 0.76 | 0.33 | -0.3 | |||
48 | AT5G27720 | Small nuclear ribonucleoprotein family protein | embryo defective 1644, SM-like protein 4 |
-0.76 | 0.3 | -0.31 | ||
49 | AT5G66750 | chromatin remodeling 1 | ATDDM1, CHA1, CHROMATIN REMODELING 1, chromatin remodeling 1, DECREASED DNA METHYLATION 1, SOMNIFEROUS 1, SOM4 |
-0.76 | 0.33 | -0.32 | ||
50 | AT3G57040 | response regulator 9 | response regulator 9, RESPONSE REGULATOR 4 |
-0.76 | 0.32 | -0.32 | ||
51 | AT1G55090 | carbon-nitrogen hydrolase family protein | 0.76 | 0.33 | -0.32 | |||
52 | AT1G19680 | RING/U-box superfamily protein | 0.76 | 0.3 | -0.31 | |||
53 | AT3G55110 | ABC-2 type transporter family protein | ATP-binding cassette G18 | 0.76 | 0.31 | -0.31 | ||
54 | AT5G39040 | transporter associated with antigen processing protein 2 | ATP-binding cassette B27, ALUMINUM SENSITIVE 1, AtALS1, ARABIDOPSIS THALIANA TRANSPORTER ASSOCIATED WITH ANTIGEN PROCESSING PROTEIN 2, transporter associated with antigen processing protein 2 |
0.76 | 0.32 | -0.34 | ||
55 | AT5G35980 | yeast YAK1-related gene 1 | yeast YAK1-related gene 1 | 0.76 | 0.31 | -0.31 | ||
56 | AT5G35980 | yeast YAK1-related gene 1 | yeast YAK1-related gene 1 | 0.76 | 0.3 | -0.32 | ||
57 | AT3G54560 | histone H2A 11 | histone H2A 11 | -0.76 | 0.32 | -0.34 | ||
58 | AT1G14345 | NAD(P)-linked oxidoreductase superfamily protein | -0.76 | 0.32 | -0.31 | |||
59 | AT5G52430 | hydroxyproline-rich glycoprotein family protein | 0.76 | 0.29 | -0.34 | |||
60 | AT3G23790 | AMP-dependent synthetase and ligase family protein | acyl activating enzyme 16 | 0.76 | 0.32 | -0.31 | ||
61 | AT5G46700 | Tetraspanin family protein | TETRASPANIN 1, TORNADO 2 | -0.75 | 0.31 | -0.28 | ||
62 | AT5G42870 | phosphatidic acid phosphohydrolase 2 | PHOSPHATIDIC ACID PHOSPHOHYDROLASE 2, phosphatidic acid phosphohydrolase 2 |
0.75 | 0.29 | -0.33 | ||
63 | AT1G23080 | Auxin efflux carrier family protein | ARABIDOPSIS PIN-FORMED 7, PIN-FORMED 7 |
-0.75 | 0.31 | -0.32 | ||
64 | AT2G23450 | Protein kinase superfamily protein | 0.75 | 0.31 | -0.29 | |||
65 | AT3G25010 | receptor like protein 41 | receptor like protein 41, receptor like protein 41 |
0.75 | 0.32 | -0.32 | ||
66 | AT2G16900 | Arabidopsis phospholipase-like protein (PEARLI 4) family | 0.75 | 0.33 | -0.32 | |||
67 | AT3G18780 | actin 2 | actin 2, DEFORMED ROOT HAIRS 1, ENHANCER OF LRX1 2, FRIZZY AND KINKED SHOOTS 2, LIGHT STRESS-REGULATED 2 |
-0.75 | 0.32 | -0.31 | ||
68 | AT1G80760 | NOD26-like intrinsic protein 6;1 | NIP6, NOD26-like intrinsic protein 6;1, NLM7 |
-0.75 | 0.33 | -0.32 | ||
69 | AT5G57150 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.75 | 0.33 | -0.3 | |||
70 | AT3G16370 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.74 | 0.31 | -0.3 | |||
71 | AT1G14280 | phytochrome kinase substrate 2 | phytochrome kinase substrate 2 | -0.74 | 0.32 | -0.29 | ||
72 | AT4G08500 | MAPK/ERK kinase kinase 1 | ARAKIN, ATMEKK1, MAPKKK8, MAPK/ERK kinase kinase 1 |
0.74 | 0.33 | -0.3 | ||
73 | AT1G18260 | HCP-like superfamily protein | EMS-mutagenized bri1 suppressor 5, HRD3A |
0.74 | 0.33 | -0.33 | ||
74 | AT1G24460 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G31570.1); Has 181008 Blast hits to 85359 proteins in 3551 species: Archae - 3290; Bacteria - 48304; Metazoa - 70793; Fungi - 13943; Plants - 10118; Viruses - 785; Other Eukaryotes - 33775 (source: NCBI BLink). |
TGN-localized SYP41 interacting protein |
0.74 | 0.31 | -0.3 | ||
75 | AT1G13100 | cytochrome P450, family 71, subfamily B, polypeptide 29 | cytochrome P450, family 71, subfamily B, polypeptide 29 |
-0.74 | 0.32 | -0.32 | ||
76 | AT3G27610 | Nucleotidylyl transferase superfamily protein | 0.74 | 0.33 | -0.34 | |||
77 | AT1G20950 | Phosphofructokinase family protein | -0.74 | 0.32 | -0.32 | |||
78 | AT1G29760 | Putative adipose-regulatory protein (Seipin) | 0.74 | 0.31 | -0.32 | |||
79 | AT1G61120 | terpene synthase 04 | GERANYLLINALOOL SYNTHASE, terpene synthase 04, TERPENE SYNTHASE 4 |
0.74 | 0.28 | -0.3 | ||
80 | AT4G30390 | unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.74 | 0.33 | -0.3 | |||
81 | AT5G22880 | histone B2 | HISTONE H2B, histone B2 | -0.74 | 0.32 | -0.33 | ||
82 | AT5G65010 | asparagine synthetase 2 | asparagine synthetase 2 | -0.74 | 0.33 | -0.32 | ||
83 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
-0.73 | 0.32 | -0.29 | ||
84 | AT2G22910 | N-acetyl-l-glutamate synthase 1 | N-acetyl-l-glutamate synthase 1 | 0.73 | 0.28 | -0.32 | ||
85 | AT3G53430 | Ribosomal protein L11 family protein | -0.73 | 0.3 | -0.34 | |||
86 | AT5G01390 | DNAJ heat shock family protein | -0.73 | 0.34 | -0.32 | |||
87 | AT5G10400 | Histone superfamily protein | -0.73 | 0.34 | -0.33 | |||
88 | AT3G55270 | mitogen-activated protein kinase phosphatase 1 | ARABIDOPSIS MITOGEN-ACTIVATED PROTEIN KINASE PHOSPHATASE 1, mitogen-activated protein kinase phosphatase 1 |
0.73 | 0.32 | -0.33 | ||
89 | AT1G72230 | Cupredoxin superfamily protein | -0.73 | 0.31 | -0.28 | |||
90 | AT3G62300 | DOMAIN OF UNKNOWN FUNCTION 724 7 | DOMAIN OF UNKNOWN FUNCTION 724 7, DOMAIN OF UNKNOWN FUNCTION 724 7 |
-0.72 | 0.32 | -0.31 | ||
91 | AT3G27400 | Pectin lyase-like superfamily protein | -0.72 | 0.33 | -0.31 | |||
92 | AT5G52650 | RNA binding Plectin/S10 domain-containing protein | -0.72 | 0.31 | -0.31 | |||
93 | AT5G66920 | SKU5 similar 17 | SKU5 similar 17 | -0.72 | 0.3 | -0.32 | ||
94 | AT4G08685 | Pollen Ole e 1 allergen and extensin family protein | SAH7 | -0.72 | 0.31 | -0.33 | ||
95 | AT5G44210 | erf domain protein 9 | ERF DOMAIN PROTEIN- 9, ERF DOMAIN PROTEIN 9, erf domain protein 9 |
-0.71 | 0.31 | -0.32 | ||
96 | AT4G34730 | ribosome-binding factor A family protein | -0.71 | 0.32 | -0.33 | |||
97 | AT5G57780 | EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors (TAIR:AT4G30410.1); Has 123 Blast hits to 123 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 123; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
P1R1 | -0.71 | 0.33 | -0.33 | ||
98 | AT1G72480 | Lung seven transmembrane receptor family protein | -0.71 | 0.31 | -0.3 | |||
99 | AT4G28660 | photosystem II reaction center PSB28 protein | photosystem II reaction center PSB28 protein |
-0.71 | 0.3 | -0.32 | ||
100 | AT5G47630 | mitochondrial acyl carrier protein 3 | mitochondrial acyl carrier protein 3 |
-0.71 | 0.29 | -0.29 | ||
101 | AT1G55260 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.71 | 0.29 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
102 | C0237 | Sinapyl alcohol | - | Sinapyl-alcohol | monolignol glucosides biosynthesis, phenylpropanoid biosynthesis |
0.88 | 0.45 | -0.46 | ||
103 | C0265 | Vitexin | - | - | - | 0.87 | 0.46 | -0.44 | ||
104 | C0190 | O-acetyl-L-Serine | - | O-acetyl-L-Serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
0.86 | 0.44 | -0.45 | ||
105 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
0.86 | 0.43 | -0.43 |