AGICode | AT1G13380 |
Description | Protein of unknown function (DUF1218) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G13380 | Protein of unknown function (DUF1218) | 1 | 0.31 | -0.32 | |||
2 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
0.79 | 0.3 | -0.32 | ||
3 | AT4G23980 | auxin response factor 9 | auxin response factor 9 | -0.78 | 0.33 | -0.31 | ||
4 | AT3G01100 | hypothetical protein 1 | ARABIDOPSIS THALIANA HYPOTHETICAL PROTEIN 1, hypothetical protein 1 |
-0.78 | 0.33 | -0.32 | ||
5 | AT1G03080 | kinase interacting (KIP1-like) family protein | -0.78 | 0.36 | -0.32 | |||
6 | AT3G62590 | alpha/beta-Hydrolases superfamily protein | -0.78 | 0.32 | -0.31 | |||
7 | AT1G73980 | Phosphoribulokinase / Uridine kinase family | -0.77 | 0.3 | -0.32 | |||
8 | AT4G10050 | esterase/lipase/thioesterase family protein | -0.77 | 0.3 | -0.31 | |||
9 | AT1G12360 | Sec1/munc18-like (SM) proteins superfamily | keule | -0.75 | 0.31 | -0.31 | ||
10 | AT3G26100 | Regulator of chromosome condensation (RCC1) family protein | -0.75 | 0.31 | -0.33 | |||
11 | AT4G32850 | nuclear poly(a) polymerase | nuclear poly(a) polymerase, poly(A) polymerase IV |
-0.75 | 0.32 | -0.32 | ||
12 | AT2G26890 | DNAJ heat shock N-terminal domain-containing protein | GRAVITROPISM DEFECTIVE 2, KATAMARI2 |
-0.75 | 0.29 | -0.31 | ||
13 | AT5G16210 | HEAT repeat-containing protein | -0.75 | 0.32 | -0.33 | |||
14 | AT1G34760 | general regulatory factor 11 | GF14 OMICRON, general regulatory factor 11, ROOT HAIR SPECIFIC 5 |
0.75 | 0.29 | -0.3 | ||
15 | AT5G04790 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.74 | 0.31 | -0.32 | |||
16 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
0.73 | 0.31 | -0.32 | ||
17 | AT5G43560 | TRAF-like superfamily protein | -0.73 | 0.31 | -0.31 | |||
18 | AT5G57150 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.73 | 0.28 | -0.31 | |||
19 | AT4G23050 | PAS domain-containing protein tyrosine kinase family protein |
-0.73 | 0.32 | -0.32 | |||
20 | AT1G54710 | homolog of yeast autophagy 18 (ATG18) H | homolog of yeast autophagy 18 (ATG18) H, homolog of yeast autophagy 18 (ATG18) H |
-0.72 | 0.3 | -0.32 | ||
21 | AT5G05570 | transducin family protein / WD-40 repeat family protein | -0.71 | 0.33 | -0.32 | |||
22 | AT5G26240 | chloride channel D | ATCLC-D, chloride channel D | -0.71 | 0.31 | -0.3 | ||
23 | AT4G30130 | Protein of unknown function (DUF630 and DUF632) | 0.71 | 0.32 | -0.34 | |||
24 | AT1G55805 | BolA-like family protein | 0.71 | 0.32 | -0.3 | |||
25 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
-0.7 | 0.31 | -0.32 | ||
26 | AT1G34350 | unknown protein; Has 192 Blast hits to 192 proteins in 79 species: Archae - 0; Bacteria - 0; Metazoa - 104; Fungi - 0; Plants - 60; Viruses - 0; Other Eukaryotes - 28 (source: NCBI BLink). |
0.7 | 0.32 | -0.33 | |||
27 | AT3G10700 | galacturonic acid kinase | galacturonic acid kinase | 0.7 | 0.32 | -0.3 | ||
28 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.7 | 0.32 | -0.32 | |||
29 | AT5G41600 | VIRB2-interacting protein 3 | VIRB2-interacting protein 3, Reticulan like protein B4 |
0.69 | 0.35 | -0.32 | ||
30 | AT2G46930 | Pectinacetylesterase family protein | 0.69 | 0.31 | -0.31 | |||
31 | AT2G14520 | CBS domain-containing protein with a domain of unknown function (DUF21) |
-0.69 | 0.33 | -0.29 | |||
32 | AT2G20100 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
0.69 | 0.3 | -0.33 | |||
33 | AT1G03750 | switch 2 | CHROMATIN REMODELING 9 | -0.69 | 0.3 | -0.32 | ||
34 | AT5G52430 | hydroxyproline-rich glycoprotein family protein | -0.69 | 0.33 | -0.32 | |||
35 | AT2G22970 | serine carboxypeptidase-like 11 | serine carboxypeptidase-like 11 | -0.68 | 0.3 | -0.31 | ||
36 | AT3G61710 | AUTOPHAGY 6 | ATATG6, AtBECLIN1, AUTOPHAGY 6, BECLIN1 |
-0.68 | 0.31 | -0.34 | ||
37 | AT2G27150 | abscisic aldehyde oxidase 3 | abscisic aldehyde oxidase 3, Aldehyde oxidase delta, Arabidopsis thaliana aldehyde oxidase 3, AtAAO3 |
-0.68 | 0.3 | -0.32 | ||
38 | AT5G46340 | O-acetyltransferase family protein | REDUCED WALL ACETYLATION 1 | -0.68 | 0.32 | -0.33 | ||
39 | AT1G15780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G10440.1); Has 103701 Blast hits to 43153 proteins in 1828 species: Archae - 30; Bacteria - 7385; Metazoa - 38639; Fungi - 11531; Plants - 7727; Viruses - 307; Other Eukaryotes - 38082 (source: NCBI BLink). |
-0.67 | 0.32 | -0.32 | |||
40 | AT1G24190 | SIN3-like 3 | ARABIDOPSIS THALIANA SIN3 HOMOLOG, ARABIDOPSIS THALIANA SIN3 HOMOLOG, SIN3-like 3 |
-0.67 | 0.31 | -0.29 | ||
41 | AT5G24350 | CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39 (InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.66 | 0.33 | -0.32 | |||
42 | AT5G24380 | YELLOW STRIPE like 2 | YELLOW STRIPE LIKE 2, YELLOW STRIPE like 2 |
-0.66 | 0.31 | -0.31 | ||
43 | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHROMATIN REMODELING COMPLEX SUBUNIT R 3, SPLAYED |
-0.66 | 0.31 | -0.33 | ||
44 | AT2G42010 | phospholipase D beta 1 | PLDBETA, phospholipase D beta 1 | -0.66 | 0.32 | -0.32 | ||
45 | AT1G02310 | Glycosyl hydrolase superfamily protein | endo-beta-mannanase 1 | -0.66 | 0.31 | -0.32 | ||
46 | AT3G09560 | Lipin family protein | PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1, PHOSPHATIDIC ACID PHOSPHOHYDROLASE 1 |
-0.65 | 0.32 | -0.29 | ||
47 | AT2G23980 | cyclic nucleotide-gated channel 6 | cyclic nucleotide-gated channel 6, CYCLIC NUCLEOTIDE GATED CHANNEL 6, cyclic nucleotide-gated channel 6 |
-0.65 | 0.29 | -0.33 | ||
48 | AT2G37650 | GRAS family transcription factor | -0.65 | 0.31 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
49 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
-0.83 | 0.45 | -0.46 | ||
50 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | -0.73 | 0.42 | -0.45 | ||
51 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.71 | 0.45 | -0.44 | ||
52 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
-0.71 | 0.32 | -0.31 | ||
53 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
-0.71 | 0.34 | -0.3 | ||
54 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
-0.7 | 0.32 | -0.33 | ||
55 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.68 | 0.33 | -0.33 | ||
56 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
-0.68 | 0.43 | -0.45 | ||
57 | C0095 | Galacturonic acid | D-Galacturonic acid | D-Galacturonate | UDP-D-galacturonate biosynthesis II (from D-galacturonate) | -0.67 | 0.3 | -0.33 |