AGICode | AT1G20520 |
Description | Arabidopsis protein of unknown function (DUF241) |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G20520 | Arabidopsis protein of unknown function (DUF241) | 1 | 0.32 | -0.34 | |||
2 | AT2G37585 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.6 | 0.31 | -0.32 | |||
3 | AT1G79170 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G28590.1); Has 12 Blast hits to 12 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). |
0.59 | 0.29 | -0.31 | |||
4 | AT1G42220 | transposable element gene | 0.59 | 0.32 | -0.31 | |||
5 | AT5G65500 | U-box domain-containing protein kinase family protein | 0.57 | 0.31 | -0.31 | |||
6 | AT3G14800 | transposable element gene | -0.55 | 0.31 | -0.32 | |||
7 | AT5G05630 | Amino acid permease family protein | -0.55 | 0.31 | -0.32 | |||
8 | AT5G07530 | glycine rich protein 17 | ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 7, ARABIDOPSIS THALIANA GLYCINE RICH PROTEIN 17, glycine rich protein 17 |
-0.54 | 0.31 | -0.32 | ||
9 | AT2G22060 | BEST Arabidopsis thaliana protein match is: Galactose oxidase/kelch repeat superfamily protein (TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.33 | -0.3 | |||
10 | AT2G17590 | Cysteine/Histidine-rich C1 domain family protein | 0.53 | 0.31 | -0.31 | |||
11 | AT3G52430 | alpha/beta-Hydrolases superfamily protein | ARABIDOPSIS PHYTOALEXIN DEFICIENT 4, PHYTOALEXIN DEFICIENT 4 |
0.53 | 0.31 | -0.33 | ||
12 | AT2G05890 | transposable element gene | 0.52 | 0.31 | -0.33 | |||
13 | AT1G17910 | Wall-associated kinase family protein | 0.51 | 0.31 | -0.32 | |||
14 | AT3G26270 | cytochrome P450, family 71, subfamily B, polypeptide 25 | cytochrome P450, family 71, subfamily B, polypeptide 25 |
0.51 | 0.32 | -0.31 | ||
15 | AT5G07450 | cyclin p4;3 | cyclin p4;3 | 0.51 | 0.31 | -0.3 | ||
16 | AT1G19410 | FBD / Leucine Rich Repeat domains containing protein | 0.51 | 0.29 | -0.33 | |||
17 | AT4G14790 | ATP-dependent RNA helicase, mitochondrial (SUV3) | ATSUV3, embryo sac development arrest 15 |
-0.5 | 0.31 | -0.32 | ||
18 | AT3G51190 | Ribosomal protein L2 family | 0.5 | 0.32 | -0.33 | |||
19 | AT1G10680 | P-glycoprotein 10 | ATP-binding cassette B10, P-glycoprotein 10 |
-0.5 | 0.33 | -0.33 | ||
20 | AT1G51210 | UDP-Glycosyltransferase superfamily protein | 0.5 | 0.31 | -0.33 | |||
21 | AT3G51070 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.49 | 0.31 | -0.34 | |||
22 | AT5G15480 | C2H2-type zinc finger family protein | 0.49 | 0.3 | -0.33 | |||
23 | AT5G46020 | CONTAINS InterPro DOMAIN/s: Casein kinase substrate, phosphoprotein PP28 (InterPro:IPR019380); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.49 | 0.3 | -0.33 | |||
24 | AT5G28130 | transposable element gene | 0.48 | 0.33 | -0.3 | |||
25 | AT1G36670 | transposable element gene | -0.48 | 0.34 | -0.32 | |||
26 | AT2G32890 | RALF-like 17 | RALF-like 17 | 0.48 | 0.3 | -0.31 | ||
27 | AT3G25160 | ER lumen protein retaining receptor family protein | 0.48 | 0.33 | -0.33 | |||
28 | AT3G31310 | transposable element gene | 0.48 | 0.32 | -0.32 | |||
29 | AT4G13880 | receptor like protein 48 | receptor like protein 48, receptor like protein 48 |
0.47 | 0.33 | -0.32 | ||
30 | AT5G07850 | HXXXD-type acyl-transferase family protein | 0.47 | 0.33 | -0.32 | |||
31 | AT2G21550 | Bifunctional dihydrofolate reductase/thymidylate synthase | 0.47 | 0.29 | -0.31 | |||
32 | AT3G49450 | F-box and associated interaction domains-containing protein | 0.46 | 0.33 | -0.32 | |||
33 | AT2G11890 | adenylate cyclases | -0.46 | 0.31 | -0.31 | |||
34 | AT1G51900 | Regulator of Vps4 activity in the MVB pathway protein | 0.46 | 0.34 | -0.34 | |||
35 | AT2G47300 | ribonuclease Ps | -0.46 | 0.31 | -0.29 | |||
36 | AT3G52700 | unknown protein; Has 6 Blast hits to 6 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.46 | 0.32 | -0.32 | |||
37 | AT2G41860 | calcium-dependent protein kinase 14 | calcium-dependent protein kinase 14 |
0.46 | 0.32 | -0.33 | ||
38 | AT5G02200 | far-red-elongated hypocotyl1-like | far-red-elongated hypocotyl1-like | 0.46 | 0.33 | -0.31 | ||
39 | AT4G08890 | transposable element gene | -0.44 | 0.3 | -0.31 | |||
40 | AT1G61480 | S-locus lectin protein kinase family protein | 0.44 | 0.3 | -0.33 | |||
41 | AT2G43235 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 41 Blast hits to 41 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.44 | 0.3 | -0.31 | |||
42 | AT5G39680 | Pentatricopeptide repeat (PPR) superfamily protein | EMBRYO DEFECTIVE 2744 | -0.44 | 0.32 | -0.33 | ||
43 | AT4G18000 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.43 | 0.31 | -0.3 | |||
44 | AT5G35540 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G27260.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.43 | 0.32 | -0.31 | |||
45 | AT5G17130 | cysteine-type peptidases | 0.42 | 0.32 | -0.31 | |||
46 | AT3G42780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G09130.1); Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.42 | 0.34 | -0.34 | |||
47 | AT3G43020 | transposable element gene | -0.41 | 0.32 | -0.31 | |||
48 | AT1G55790 | Domain of unknown function (DUF2431) | 0.4 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
49 | C0262 | UDP-glucuronic acid | - | UDP-D-glucuronate | xylan biosynthesis, UDP-D-glucuronate biosynthesis (from myo-inositol), UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate), UDP-D-apiose biosynthesis (from UDP-D-glucuronate), galactose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis |
0.8 | 0.46 | -0.47 | ||
50 | C0261 | UDP-glucose | - | UDP-D-glucose | quercetin glucoside biosynthesis (Arabidopsis), abscisic acid glucose ester biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), UDP-glucose biosynthesis (from sucrose), 2,4,6-trinitrotoluene degradation, galactose degradation I (Leloir pathway), cytokinins-O-glucoside biosynthesis, trehalose biosynthesis I, dolichyl-diphosphooligosaccharide biosynthesis, phenolic malonylglucosides biosynthesis, callose biosynthesis, superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside), glucosinolate biosynthesis from hexahomomethionine, coniferin metabolism, glucosinolate biosynthesis from phenylalanine, xyloglucan biosynthesis, glucosinolate biosynthesis from pentahomomethionine, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), glucosinolate biosynthesis from dihomomethionine, cellulose biosynthesis, sinapate ester biosynthesis, superpathway of IAA conjugate biosynthesis, salicylate glucosides biosynthesis IV, sucrose biosynthesis I, glucosinolate biosynthesis from trihomomethionine, tetrahydrofolate biosynthesis II, sucrose degradation III, UDP-D-xylose and UDP-D-glucuronate biosynthesis, coumarin biosynthesis (via 2-coumarate), superpathway of sucrose and starch metabolism I (non-photosynthetic tissue), monolignol glucosides biosynthesis, glucosinolate biosynthesis from homomethionine, kaempferol glucoside biosynthesis (Arabidopsis), salicylate glucosides biosynthesis III, cytokinins 7-N-glucoside biosynthesis, galactose degradation III, cytokinins 9-N-glucoside biosynthesis, glucosinolate biosynthesis from tryptophan, UDP-galactose biosynthesis, salicylate glucosides biosynthesis II, stachyose degradation, superpathway of sucrose and starch metabolism II (photosynthetic tissue), UDP-glucose biosynthesis (from glucose 6-phosphate), sphingolipid biosynthesis (plants), glucosinolate biosynthesis from tetrahomomethionine, galactose degradation II, UDP-L-rhamnose biosynthesis |
0.78 | 0.42 | -0.44 | ||
51 | C0088 | FAD | - | FAD | cytokinins degradation, lysine degradation II, valine degradation I, isoleucine degradation I, flavin biosynthesis I (bacteria and plants) |
0.77 | 0.45 | -0.42 | ||
52 | C0213 | PR_MST_2410.2 | - | - | - | -0.7 | 0.44 | -0.44 | ||
53 | C0215 | PR_MST_2527.1 | - | - | - | -0.68 | 0.47 | -0.46 | ||
54 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | 0.67 | 0.43 | -0.46 | ||
55 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.65 | 0.47 | -0.5 | ||
56 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | 0.64 | 0.46 | -0.44 | ||
57 | C0053 | ADP | - | ADP | phosphatidylcholine biosynthesis I, mannitol degradation II, lipid IVA biosynthesis, stachyose degradation, Rubisco shunt, copper transport II, glycerol degradation IV, chorismate biosynthesis, folate polyglutamylation II, galactose degradation III, D-myo-inositol (1,4,5)-trisphosphate biosynthesis, UDP-L-arabinose biosynthesis II (from L-arabinose), cadmium transport I, folate polyglutamylation, coenzyme A biosynthesis, sulfate activation for sulfonation, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), pyrimidine deoxyribonucleotides de novo biosynthesis I, galactose degradation II, inosine-5'-phosphate biosynthesis II, ribose degradation, acetyl-CoA biosynthesis (from citrate), inositol pyrophosphates biosynthesis, fatty acid biosynthesis initiation I, xylose degradation I, adenine and adenosine salvage VI, TCA cycle variation III (eukaryotic), tetrahydrofolate biosynthesis II, phosphatidylethanolamine biosynthesis II, pyridoxal 5'-phosphate salvage pathway, citrulline biosynthesis, trans-zeatin biosynthesis, glutamine biosynthesis I, arginine biosynthesis II (acetyl cycle), L-Ndelta-acetylornithine biosynthesis, mevalonate pathway I, methionine biosynthesis II, trehalose degradation II (trehalase), citrulline degradation, methionine salvage pathway, TCA cycle variation V (plant), chlorophyllide a biosynthesis I, starch degradation I, methylerythritol phosphate pathway, pyridine nucleotide cycling (plants), ceramide degradation, biotin-carboxyl carrier protein assembly, purine nucleotide metabolism (phosphotransfer and nucleotide modification), UDP-D-galacturonate biosynthesis II (from D-galacturonate), asparagine biosynthesis III (tRNA-dependent), superpathway of glyoxylate cycle and fatty acid degradation, NAD/NADH phosphorylation and dephosphorylation, 1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3), galactose degradation I (Leloir pathway), uridine-5'-phosphate biosynthesis, lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3), sucrose degradation III, lysine biosynthesis VI, sphingolipid biosynthesis (plants), choline biosynthesis I, GDP-glucose biosynthesis, photorespiration, gamma-glutamyl cycle (plant pathway), 5-aminoimidazole ribonucleotide biosynthesis I, gamma-glutamyl cycle, thiamine biosynthesis II, proline biosynthesis III, glutathione biosynthesis, folate transformations II, ornithine biosynthesis, diphthamide biosynthesis, S-methyl-5'-thioadenosine degradation I, starch biosynthesis, arginine biosynthesis I, homoserine biosynthesis, flavin biosynthesis I (bacteria and plants), sucrose biosynthesis I, leucine degradation I, glycolysis I, pyrimidine ribonucleotides interconversion, 1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza), glycolysis IV (plant cytosol), Calvin-Benson-Bassham cycle, UDP-D-glucuronate biosynthesis (from myo-inositol), guanine and guanosine salvage III, glutamine biosynthesis III, L-glutamine biosynthesis II (tRNA-dependent), GDP-L-fucose biosynthesis II (from L-fucose), nitrate reduction II (assimilatory), ammonia assimilation cycle II, gluconeogenesis I, threonine biosynthesis from homoserine, mannose degradation, urea cycle, lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3), biotin biosynthesis II |
0.64 | 0.45 | -0.43 | ||
58 | C0214 | PR_MST_2412.1 | - | - | - | -0.61 | 0.45 | -0.48 | ||
59 | C0100 | Glucose-6-phosphate | D-(+)-Glucose-6-phosphate | D-Glucose-6-phosphate | starch biosyntehsis | -0.5 | 0.31 | -0.31 |