AGICode | AT1G60950 |
Description | 2Fe-2S ferredoxin-like superfamily protein |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G60950 | 2Fe-2S ferredoxin-like superfamily protein | FERREDOXIN 2, FED A | 1 | 0.31 | -0.32 | ||
2 | AT5G08050 | Protein of unknown function (DUF1118) | 0.9 | 0.3 | -0.3 | |||
3 | AT4G18480 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHLORINA 42, CHLORINA 42, CHL11, CHLI-1, CHLI1 |
0.9 | 0.3 | -0.32 | ||
4 | AT2G26500 | cytochrome b6f complex subunit (petM), putative | 0.9 | 0.32 | -0.28 | |||
5 | AT1G14345 | NAD(P)-linked oxidoreductase superfamily protein | 0.89 | 0.32 | -0.33 | |||
6 | AT3G04790 | Ribose 5-phosphate isomerase, type A protein | EMBRYO DEFECTIVE 3119 | 0.88 | 0.31 | -0.33 | ||
7 | AT5G13630 | magnesium-chelatase subunit chlH, chloroplast, putative / Mg-protoporphyrin IX chelatase, putative (CHLH) |
ABA-BINDING PROTEIN, CONDITIONAL CHLORINA, CCH1, H SUBUNIT OF MG-CHELATASE, GENOMES UNCOUPLED 5 |
0.88 | 0.34 | -0.31 | ||
8 | AT4G38970 | fructose-bisphosphate aldolase 2 | fructose-bisphosphate aldolase 2 | 0.87 | 0.3 | -0.33 | ||
9 | AT5G45820 | CBL-interacting protein kinase 20 | CBL-interacting protein kinase 20, PROTEIN KINASE 18, SNF1-RELATED PROTEIN KINASE 3.6 |
0.87 | 0.32 | -0.32 | ||
10 | AT2G23670 | homolog of Synechocystis YCF37 | homolog of Synechocystis YCF37 | 0.87 | 0.29 | -0.28 | ||
11 | AT3G47070 | LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thylakoid soluble phosphoprotein TSP9 (InterPro:IPR021584); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.87 | 0.3 | -0.32 | |||
12 | AT4G16980 | arabinogalactan-protein family | 0.86 | 0.32 | -0.32 | |||
13 | AT4G28660 | photosystem II reaction center PSB28 protein | photosystem II reaction center PSB28 protein |
0.86 | 0.3 | -0.32 | ||
14 | AT5G64040 | photosystem I reaction center subunit PSI-N, chloroplast, putative / PSI-N, putative (PSAN) |
PSAN | 0.86 | 0.3 | -0.32 | ||
15 | AT5G19750 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein | 0.85 | 0.3 | -0.32 | |||
16 | AT5G05000 | translocon at the outer envelope membrane of chloroplasts 34 |
ARABIDOPSIS THALIANA TRANSLOCON AT THE OUTER ENVELOPE MEMBRANE OF CHLOROPLASTS 34, OEP34, translocon at the outer envelope membrane of chloroplasts 34 |
0.85 | 0.31 | -0.3 | ||
17 | AT2G15620 | nitrite reductase 1 | ARABIDOPSIS THALIANA NITRITE REDUCTASE, NITRITE REDUCTASE, nitrite reductase 1 |
0.84 | 0.29 | -0.33 | ||
18 | AT1G31330 | photosystem I subunit F | photosystem I subunit F | 0.84 | 0.32 | -0.3 | ||
19 | AT1G70730 | Phosphoglucomutase/phosphomannomutase family protein | phosphoglucomutase 2 | 0.84 | 0.32 | -0.29 | ||
20 | AT3G53430 | Ribosomal protein L11 family protein | 0.83 | 0.3 | -0.36 | |||
21 | AT1G12090 | extensin-like protein | extensin-like protein | 0.83 | 0.32 | -0.3 | ||
22 | AT5G61000 | Replication factor-A protein 1-related | ATRPA70D, RPA70D | 0.83 | 0.3 | -0.32 | ||
23 | AT5G08415 | Radical SAM superfamily protein | 0.82 | 0.31 | -0.33 | |||
24 | AT1G50575 | Putative lysine decarboxylase family protein | 0.81 | 0.32 | -0.3 | |||
25 | AT4G28310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G52270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.31 | -0.29 | |||
26 | AT1G18260 | HCP-like superfamily protein | EMS-mutagenized bri1 suppressor 5, HRD3A |
-0.81 | 0.3 | -0.31 | ||
27 | AT4G28750 | Photosystem I reaction centre subunit IV / PsaE protein | PSA E1 KNOCKOUT | 0.81 | 0.31 | -0.33 | ||
28 | AT3G60245 | Zinc-binding ribosomal protein family protein | 0.81 | 0.32 | -0.33 | |||
29 | AT4G33220 | pectin methylesterase 44 | A. THALIANA PECTIN METHYLESTERASE 44, pectin methylesterase 44 |
0.8 | 0.3 | -0.3 | ||
30 | AT1G09310 | Protein of unknown function, DUF538 | 0.8 | 0.32 | -0.32 | |||
31 | AT4G30000 | Dihydropterin pyrophosphokinase / Dihydropteroate synthase | 0.8 | 0.33 | -0.3 | |||
32 | AT1G07450 | NAD(P)-binding Rossmann-fold superfamily protein | 0.8 | 0.3 | -0.31 | |||
33 | AT4G39960 | Molecular chaperone Hsp40/DnaJ family protein | 0.8 | 0.32 | -0.34 | |||
34 | AT3G02380 | CONSTANS-like 2 | CONSTANS-LIKE 2, CONSTANS-like 2 | 0.79 | 0.32 | -0.35 | ||
35 | AT2G21540 | SEC14-like 3 | SEC14-LIKE 3, SEC14-like 3 | 0.79 | 0.32 | -0.33 | ||
36 | AT4G23290 | cysteine-rich RLK (RECEPTOR-like protein kinase) 21 | cysteine-rich RLK (RECEPTOR-like protein kinase) 21 |
0.79 | 0.31 | -0.31 | ||
37 | AT5G03120 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; Has 14 Blast hits to 14 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.79 | 0.31 | -0.29 | |||
38 | AT3G54900 | CAX interacting protein 1 | GLUTAREDOXIN, CAX interacting protein 1 |
0.79 | 0.32 | -0.31 | ||
39 | AT3G51090 | Protein of unknown function (DUF1640) | -0.78 | 0.32 | -0.32 | |||
40 | AT2G22300 | signal responsive 1 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, signal responsive 1 |
-0.77 | 0.3 | -0.33 | ||
41 | AT2G40270 | Protein kinase family protein | -0.77 | 0.32 | -0.31 | |||
42 | AT1G29760 | Putative adipose-regulatory protein (Seipin) | -0.77 | 0.31 | -0.31 | |||
43 | AT5G02170 | Transmembrane amino acid transporter family protein | -0.77 | 0.33 | -0.31 | |||
44 | AT1G21450 | SCARECROW-like 1 | SCARECROW-like 1 | -0.76 | 0.34 | -0.33 | ||
45 | AT1G61065 | Protein of unknown function (DUF1218) | -0.75 | 0.29 | -0.31 | |||
46 | AT4G28300 | Protein of unknown function (DUF1421) | -0.75 | 0.31 | -0.33 | |||
47 | AT2G31260 | autophagy 9 (APG9) | autophagy 9, ATAPG9 | -0.75 | 0.3 | -0.33 | ||
48 | AT2G27830 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.75 | 0.32 | -0.31 | |||
49 | AT5G47050 | SBP (S-ribonuclease binding protein) family protein | -0.74 | 0.31 | -0.33 | |||
50 | AT2G44500 | O-fucosyltransferase family protein | -0.74 | 0.33 | -0.32 | |||
51 | AT2G02370 | SNARE associated Golgi protein family | -0.74 | 0.32 | -0.31 | |||
52 | AT3G06500 | Plant neutral invertase family protein | alkaline/neutral invertase C | -0.73 | 0.32 | -0.32 | ||
53 | AT1G31130 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 246 Blast hits to 244 proteins in 29 species: Archae - 2; Bacteria - 16; Metazoa - 0; Fungi - 0; Plants - 222; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). |
-0.73 | 0.3 | -0.31 | |||
54 | AT3G62010 | unknown protein; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 553 Blast hits to 216 proteins in 93 species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi - 58; Plants - 108; Viruses - 0; Other Eukaryotes - 70 (source: NCBI BLink). |
-0.73 | 0.32 | -0.32 | |||
55 | AT1G19310 | RING/U-box superfamily protein | -0.71 | 0.32 | -0.31 | |||
56 | AT4G33940 | RING/U-box superfamily protein | -0.71 | 0.32 | -0.33 | |||
57 | AT4G17500 | ethylene responsive element binding factor 1 | ethylene responsive element binding factor 1, ethylene responsive element binding factor 1 |
-0.71 | 0.32 | -0.31 | ||
58 | AT1G27030 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G27020.1); Has 504 Blast hits to 502 proteins in 169 species: Archae - 0; Bacteria - 299; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 138 (source: NCBI BLink). |
-0.7 | 0.32 | -0.31 | |||
59 | AT5G35080 | INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mannose-6-phosphate receptor, binding (InterPro:IPR009011), Glucosidase II beta subunit-like (InterPro:IPR012913); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.31 | -0.3 | |||
60 | AT3G10260 | Reticulon family protein | -0.7 | 0.32 | -0.32 | |||
61 | AT1G69890 | Protein of unknown function (DUF569) | -0.7 | 0.32 | -0.29 | |||
62 | AT5G59580 | UDP-glucosyl transferase 76E1 | UDP-glucosyl transferase 76E1 | -0.7 | 0.31 | -0.32 | ||
63 | AT1G28480 | Thioredoxin superfamily protein | GRX480, roxy19 | -0.7 | 0.32 | -0.31 | ||
64 | AT3G52800 | A20/AN1-like zinc finger family protein | -0.7 | 0.32 | -0.31 | |||
65 | AT2G01180 | phosphatidic acid phosphatase 1 | ATLPP1, phosphatidic acid phosphatase 1, LIPID PHOSPHATE PHOSPHATASE 1, phosphatidic acid phosphatase 1 |
-0.7 | 0.31 | -0.31 | ||
66 | AT2G23320 | WRKY DNA-binding protein 15 | WRKY DNA-binding protein 15 | -0.7 | 0.33 | -0.32 | ||
67 | AT3G59710 | NAD(P)-binding Rossmann-fold superfamily protein | -0.69 | 0.31 | -0.33 | |||
68 | AT1G73080 | PEP1 receptor 1 | PEP1 RECEPTOR 1, PEP1 receptor 1 | -0.69 | 0.31 | -0.31 | ||
69 | AT3G50650 | GRAS family transcription factor | -0.69 | 0.29 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
70 | C0120 | Isocitric acid | - | Isocitrate | TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), glutamine biosynthesis III, glyoxylate cycle |
-0.83 | 0.44 | -0.45 | ||
71 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
-0.8 | 0.45 | -0.48 |