AT1G73240 : -
Query Information
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AGICode AT1G73240
Description CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup (InterPro:IPR019049); Has 36 Blast hits to 36 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G73240 CONTAINS InterPro DOMAIN/s: Nucleoporin protein Ndc1-Nup
(InterPro:IPR019049); Has 36 Blast hits to 36 proteins in
17 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi -
0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 1 0.32 -0.31
2 AT1G29880 glycyl-tRNA synthetase / glycine--tRNA ligase 0.8 0.31 -0.29
3 AT3G12050 Aha1 domain-containing protein 0.79 0.35 -0.32
4 AT5G61970 signal recognition particle-related / SRP-related 0.78 0.3 -0.31
5 AT1G52160 tRNAse Z3 tRNAse Z3 0.78 0.34 -0.3
6 AT4G21150 ribophorin II (RPN2) family protein HAPLESS 6 0.77 0.34 -0.3
7 AT5G61780 TUDOR-SN protein 2 Arabidopsis thaliana TUDOR-SN
protein 2, TUDOR-SN protein 2,
TUDOR-SN protein 2		 0.77 0.31 -0.32
8 AT2G38960 endoplasmic reticulum oxidoreductins 2 endoplasmic reticulum
oxidoreductins 2, endoplasmic
reticulum oxidoreductins 2		 0.76 0.29 -0.3
9 AT3G04710 ankyrin repeat family protein tetratricopeptide repeat 10 0.76 0.3 -0.33
10 AT3G59020 ARM repeat superfamily protein 0.76 0.31 -0.33
11 AT3G23990 heat shock protein 60 heat shock protein 60, HEAT SHOCK
PROTEIN 60-3B		 0.76 0.3 -0.28
12 AT3G13860 heat shock protein 60-3A heat shock protein 60-3A 0.75 0.32 -0.32
13 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.75 0.32 -0.31
14 AT4G19210 RNAse l inhibitor protein 2 ATP-binding cassette E2,
ARABIDOPSIS THALIANA RNASE L
INHIBITOR PROTEIN 2, RNAse l
inhibitor protein 2		 0.75 0.3 -0.3
15 AT5G16300 Vps51/Vps67 family (components of vesicular transport)
protein		 0.74 0.31 -0.32
16 AT3G52140 tetratricopeptide repeat (TPR)-containing protein 0.74 0.34 -0.31
17 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.32 -0.32
18 AT3G52070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 23 Blast hits to 23 proteins
in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.74 0.32 -0.3
19 AT3G01800 Ribosome recycling factor 0.74 0.32 -0.3
20 AT2G21390 Coatomer, alpha subunit 0.73 0.31 -0.3
21 AT3G62360 Carbohydrate-binding-like fold 0.73 0.31 -0.31
22 AT1G43690 ubiquitin interaction motif-containing protein 0.73 0.32 -0.3
23 AT5G25280 serine-rich protein-related -0.73 0.33 -0.31
24 AT5G14950 golgi alpha-mannosidase II ATGMII, golgi alpha-mannosidase II 0.72 0.31 -0.3
25 AT1G17960 Threonyl-tRNA synthetase 0.72 0.3 -0.29
26 AT1G70770 Protein of unknown function DUF2359, transmembrane 0.72 0.33 -0.31
27 AT3G57650 lysophosphatidyl acyltransferase 2 lysophosphatidyl acyltransferase 2 0.72 0.33 -0.32
28 AT3G23430 phosphate 1 ARABIDOPSIS PHOSPHATE 1, phosphate
1		 0.72 0.3 -0.32
29 AT1G26460 Tetratricopeptide repeat (TPR)-like superfamily protein 0.72 0.32 -0.32
30 AT5G19690 staurosporin and temperature sensitive 3-like A staurosporin and temperature
sensitive 3-like A		 0.71 0.33 -0.3
31 AT5G62470 myb domain protein 96 MYB DOMAIN PROTEIN 96, myb domain
protein 96, MYBCOV1		 -0.71 0.33 -0.3
32 AT4G05440 temperature sensing protein-related embryo sac development arrest 35 0.71 0.3 -0.3
33 AT1G63810 CONTAINS InterPro DOMAIN/s: Nrap protein
(InterPro:IPR005554); Has 396 Blast hits to 382 proteins in
182 species: Archae - 3; Bacteria - 2; Metazoa - 142; Fungi
- 146; Plants - 43; Viruses - 0; Other Eukaryotes - 60
(source: NCBI BLink).		 0.7 0.31 -0.31
34 AT1G14300 ARM repeat superfamily protein 0.7 0.3 -0.32
35 AT4G27010 CONTAINS InterPro DOMAIN/s: Ribosome 60S biogenesis
N-terminal (InterPro:IPR021714); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G72270.1); Has
30201 Blast hits to 17322 proteins in 780 species: Archae -
12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 EMBRYO DEFECTIVE 2788 0.7 0.32 -0.32
36 AT5G05520 Outer membrane OMP85 family protein 0.69 0.32 -0.32
37 AT1G51590 alpha-mannosidase 1 ALPHA-MANNOSIDASE IB,
alpha-mannosidase 1		 0.69 0.33 -0.31
38 AT1G17790 DNA-binding bromodomain-containing protein -0.69 0.29 -0.33
39 AT3G56430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, vacuole; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT2G40800.1); Has 3121 Blast hits to 1477 proteins in
196 species: Archae - 12; Bacteria - 170; Metazoa - 996;
Fungi - 324; Plants - 132; Viruses - 59; Other Eukaryotes -
1428 (source: NCBI BLink).		 0.69 0.33 -0.32
40 AT3G19790 unknown protein; Has 32 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 13; Fungi - 2;
Plants - 14; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.69 0.32 -0.3
41 AT1G48040 Protein phosphatase 2C family protein 0.69 0.31 -0.33
42 AT5G16080 carboxyesterase 17 carboxyesterase 17,
carboxyesterase 17		 0.68 0.3 -0.3
43 AT3G25230 rotamase FKBP 1 ATFKBP62, FK506 BINDING PROTEIN
62, rotamase FKBP 1		 0.68 0.32 -0.32
44 AT5G45630 Protein of unknown function, DUF584 -0.68 0.32 -0.31
45 AT4G14500 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.68 0.32 -0.31
46 AT5G36950 DegP protease 10 DegP protease 10 0.68 0.32 -0.33
47 AT5G65900 DEA(D/H)-box RNA helicase family protein 0.68 0.31 -0.32
48 AT3G54980 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.3
49 AT1G10950 transmembrane nine 1 AtTMN1, transmembrane nine 1 0.68 0.32 -0.29
50 AT3G61590 Galactose oxidase/kelch repeat superfamily protein HS, HAWAIIAN SKIRT 0.68 0.34 -0.32
51 AT4G30190 H(+)-ATPase 2 H(+)-ATPase 2, H(+)-ATPase 2,
PLASMA MEMBRANE PROTON ATPASE 2		 0.68 0.34 -0.32
52 AT3G03110 exportin 1B CRM1B, exportin 1B 0.67 0.31 -0.31
53 AT3G47160 RING/U-box superfamily protein -0.67 0.31 -0.34
54 AT5G53480 ARM repeat superfamily protein 0.67 0.31 -0.28
55 AT1G70590 F-box family protein -0.67 0.3 -0.3
56 AT5G49530 SIN-like family protein 0.67 0.31 -0.31
57 AT5G60040 nuclear RNA polymerase C1 nuclear RNA polymerase C1 0.67 0.33 -0.33
58 AT3G17430 Nucleotide-sugar transporter family protein 0.67 0.32 -0.31
59 AT5G10840 Endomembrane protein 70 protein family 0.67 0.32 -0.34
60 AT3G28720 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G58100.1); Has 1610 Blast hits to 344 proteins in
85 species: Archae - 0; Bacteria - 567; Metazoa - 95; Fungi
- 71; Plants - 145; Viruses - 0; Other Eukaryotes - 732
(source: NCBI BLink).		 0.67 0.33 -0.33
61 AT1G12680 phosphoenolpyruvate carboxylase-related kinase 2 phosphoenolpyruvate
carboxylase-related kinase 2		 -0.67 0.33 -0.32
62 AT1G22710 sucrose-proton symporter 2 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 2,
sucrose-proton symporter 2,
SUCROSE TRANSPORTER 1		 -0.66 0.31 -0.31
63 AT2G35950 embryo sac development arrest 12 embryo sac development arrest 12 -0.65 0.3 -0.33
64 AT4G24020 NIN like protein 7 NIN like protein 7 -0.65 0.34 -0.32
65 AT5G06480 Immunoglobulin E-set superfamily protein -0.64 0.33 -0.31
66 AT5G65500 U-box domain-containing protein kinase family protein -0.64 0.29 -0.29
67 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.64 0.33 -0.31
68 AT2G20770 GCR2-like 2 GCR2-like 2 -0.64 0.31 -0.3
69 AT3G26740 CCR-like CCR-like -0.64 0.32 -0.3
70 AT5G51320 transposable element gene -0.63 0.3 -0.33
71 AT4G14270 Protein containing PAM2 motif which mediates interaction
with the PABC domain of polyadenyl binding proteins.		 -0.63 0.3 -0.31
72 AT3G20550 SMAD/FHA domain-containing protein DAWDLE -0.63 0.31 -0.32
73 AT4G05070 Wound-responsive family protein -0.63 0.31 -0.33
74 AT5G09340 Ubiquitin family protein -0.62 0.31 -0.32
75 AT3G48710 DEK domain-containing chromatin associated protein -0.62 0.31 -0.32
76 AT4G07540 transposable element gene -0.62 0.31 -0.32
77 AT1G28070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G33510.1); Has 85 Blast hits
to 77 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.62 0.32 -0.3
78 AT4G13830 DNAJ-like 20 DNAJ-like 20 -0.61 0.31 -0.33
79 AT2G09840 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT2G06904.1); Has 10 Blast
hits to 10 proteins in 1 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 10; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.61 0.33 -0.31
80 AT4G22360 SWIB complex BAF60b domain-containing protein -0.61 0.34 -0.31
81 AT2G10465 transposable element gene -0.6 0.33 -0.31
82 AT3G59530 Calcium-dependent phosphotriesterase superfamily protein LESS ADHERENT POLLEN 3 -0.6 0.31 -0.32
83 AT3G20420 RNAse THREE-like protein 2 RNASEIII-LIKE 2, RNAse THREE-like
protein 2		 -0.59 0.29 -0.31
84 AT5G62610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.59 0.32 -0.33
85 AT2G05600 F-box associated ubiquitination effector family protein -0.58 0.32 -0.31
86 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.58 0.3 -0.32
87 AT1G75930 extracellular lipase 6 extracellular lipase 6 -0.58 0.29 -0.34
88 AT5G53220 unknown protein; Has 3099 Blast hits to 2528 proteins in
332 species: Archae - 2; Bacteria - 245; Metazoa - 1059;
Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes -
1012 (source: NCBI BLink).		 -0.58 0.3 -0.35
89 AT2G05950 transposable element gene -0.58 0.32 -0.31
90 AT4G23180 cysteine-rich RLK (RECEPTOR-like protein kinase) 10 cysteine-rich RLK (RECEPTOR-like
protein kinase) 10, RLK4		 -0.58 0.34 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
91 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.72 0.41 -0.43 C0056
92 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.69 0.45 -0.43 C0032
93 C0030 3-Methylsulfinyl-n-propylglucosinolate - 3-Methylsulfinylpropyl-glucosinolate glucosinolate biosynthesis from homomethionine -0.69 0.46 -0.43 C0030
94 C0121 Isoheptylglucosinolate - - - 0.67 0.45 -0.44
95 C0162 MST_1588.3 - - - -0.65 0.42 -0.46
96 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis -0.64 0.42 -0.45 C0234