AGICode | AT1G74560 |
Description | NAP1-related protein 1 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G74560 | NAP1-related protein 1 | NAP1-related protein 1 | 1 | 0.32 | -0.3 | ||
2 | AT3G44750 | histone deacetylase 3 | ATHD2A, HISTONE DEACETYLASE 2A, histone deacetylase 3, HDT1 |
0.91 | 0.31 | -0.32 | ||
3 | AT3G20050 | T-complex protein 1 alpha subunit | T-complex protein 1 alpha subunit, T-complex protein 1 alpha subunit |
0.87 | 0.33 | -0.31 | ||
4 | AT4G17520 | Hyaluronan / mRNA binding family | 0.85 | 0.29 | -0.31 | |||
5 | AT3G12390 | Nascent polypeptide-associated complex (NAC), alpha subunit family protein |
0.85 | 0.31 | -0.31 | |||
6 | AT3G03920 | H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein | 0.84 | 0.33 | -0.34 | |||
7 | AT5G52470 | fibrillarin 1 | ATFBR1, ATFIB1, FIBRILLARIN 1, fibrillarin 1, SKP1/ASK1-INTERACTING PROTEIN |
0.84 | 0.33 | -0.32 | ||
8 | AT3G03960 | TCP-1/cpn60 chaperonin family protein | 0.84 | 0.31 | -0.31 | |||
9 | AT4G12600 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.84 | 0.3 | -0.32 | |||
10 | AT2G37990 | ribosome biogenesis regulatory protein (RRS1) family protein |
0.83 | 0.31 | -0.31 | |||
11 | AT2G47790 | Transducin/WD40 repeat-like superfamily protein | 0.83 | 0.32 | -0.31 | |||
12 | AT3G56620 | nodulin MtN21 /EamA-like transporter family protein | -0.83 | 0.3 | -0.32 | |||
13 | AT5G19320 | RAN GTPase activating protein 2 | RAN GTPase activating protein 2 | 0.82 | 0.32 | -0.29 | ||
14 | AT3G56070 | rotamase cyclophilin 2 | rotamase cyclophilin 2 | 0.82 | 0.33 | -0.33 | ||
15 | AT3G57290 | eukaryotic translation initiation factor 3E | ATEIF3E-1, ATINT6, eukaryotic translation initiation factor 3E, INT-6, INT6, TIF3E1 |
0.82 | 0.3 | -0.3 | ||
16 | AT4G31120 | SHK1 binding protein 1 | ATPRMT5, PROTEIN ARGININE METHYLTRANSFERASE 5, SHK1 binding protein 1 |
0.82 | 0.31 | -0.3 | ||
17 | AT3G52580 | Ribosomal protein S11 family protein | 0.81 | 0.3 | -0.31 | |||
18 | AT1G80270 | PENTATRICOPEPTIDE REPEAT 596 | PENTATRICOPEPTIDE REPEAT 596 | 0.81 | 0.34 | -0.3 | ||
19 | AT2G20920 | Protein of unknown function (DUF3353) | -0.81 | 0.31 | -0.32 | |||
20 | AT3G53960 | Major facilitator superfamily protein | -0.81 | 0.31 | -0.33 | |||
21 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
-0.8 | 0.33 | -0.32 | ||
22 | AT3G57000 | nucleolar essential protein-related | 0.8 | 0.32 | -0.34 | |||
23 | AT5G18640 | alpha/beta-Hydrolases superfamily protein | -0.8 | 0.31 | -0.31 | |||
24 | AT3G11250 | Ribosomal protein L10 family protein | 0.8 | 0.32 | -0.3 | |||
25 | AT2G14460 | unknown protein; Has 3 Blast hits to 3 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.8 | 0.3 | -0.31 | |||
26 | AT5G61020 | evolutionarily conserved C-terminal region 3 | evolutionarily conserved C-terminal region 3 |
0.8 | 0.34 | -0.32 | ||
27 | AT1G18800 | NAP1-related protein 2 | NAP1-related protein 2 | 0.8 | 0.32 | -0.32 | ||
28 | AT4G25630 | fibrillarin 2 | ATFIB2, fibrillarin 2 | 0.8 | 0.32 | -0.31 | ||
29 | AT4G02220 | zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein |
0.79 | 0.31 | -0.3 | |||
30 | AT1G04190 | Tetratricopeptide repeat (TPR)-like superfamily protein | tetratricopeptide repeat 3 | 0.79 | 0.28 | -0.32 | ||
31 | AT4G37980 | elicitor-activated gene 3-1 | ATCAD7, CINNAMYL-ALCOHOL DEHYDROGENASE 7, ELICITOR-ACTIVATED GENE 3, elicitor-activated gene 3-1 |
-0.78 | 0.32 | -0.31 | ||
32 | AT2G34570 | PIN domain-like family protein | maternal effect embryo arrest 21 | 0.78 | 0.31 | -0.3 | ||
33 | AT1G72440 | CCAAT-binding factor | embryo sac development arrest 25, SLOW WALKER2 |
0.78 | 0.3 | -0.32 | ||
34 | AT1G79470 | Aldolase-type TIM barrel family protein | 0.78 | 0.34 | -0.32 | |||
35 | AT1G20880 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.78 | 0.32 | -0.31 | |||
36 | AT1G60770 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.78 | 0.32 | -0.33 | |||
37 | AT1G01710 | Acyl-CoA thioesterase family protein | -0.77 | 0.31 | -0.31 | |||
38 | AT4G18140 | SCP1-like small phosphatase 4b | SCP1-like small phosphatase 4b | -0.77 | 0.33 | -0.35 | ||
39 | AT5G02530 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.77 | 0.32 | -0.32 | |||
40 | AT2G26060 | Transducin/WD40 repeat-like superfamily protein | embryo defective 1345 | 0.77 | 0.33 | -0.29 | ||
41 | AT1G58200 | MSCS-like 3 | MSCS-like 3 | -0.77 | 0.31 | -0.33 | ||
42 | AT1G19640 | jasmonic acid carboxyl methyltransferase | jasmonic acid carboxyl methyltransferase |
-0.77 | 0.31 | -0.32 | ||
43 | AT3G51895 | sulfate transporter 3;1 | AST12, sulfate transporter 3;1 | -0.77 | 0.32 | -0.31 | ||
44 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | 0.77 | 0.32 | -0.3 | |||
45 | AT3G23830 | glycine-rich RNA-binding protein 4 | AtGRP4, GR-RBP4, glycine-rich RNA-binding protein 4 |
0.76 | 0.3 | -0.28 | ||
46 | AT1G61580 | R-protein L3 B | ARABIDOPSIS RIBOSOMAL PROTEIN 2, R-protein L3 B |
0.76 | 0.31 | -0.31 | ||
47 | AT2G22300 | signal responsive 1 | CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR 3, signal responsive 1 |
-0.76 | 0.33 | -0.32 | ||
48 | AT5G65670 | indole-3-acetic acid inducible 9 | indole-3-acetic acid inducible 9 | 0.76 | 0.3 | -0.33 | ||
49 | AT3G55110 | ABC-2 type transporter family protein | ATP-binding cassette G18 | -0.76 | 0.31 | -0.31 | ||
50 | AT1G24070 | cellulose synthase-like A10 | cellulose synthase-like A10, CELLULOSE SYNTHASE LIKE A10, cellulose synthase-like A10 |
-0.76 | 0.32 | -0.32 | ||
51 | AT5G64100 | Peroxidase superfamily protein | 0.76 | 0.33 | -0.32 | |||
52 | AT4G11570 | Haloacid dehalogenase-like hydrolase (HAD) superfamily protein |
-0.76 | 0.34 | -0.3 | |||
53 | AT2G07340 | PREFOLDIN 1 | PREFOLDIN 1 | 0.76 | 0.31 | -0.33 | ||
54 | AT5G43430 | electron transfer flavoprotein beta | electron transfer flavoprotein beta |
-0.76 | 0.32 | -0.3 | ||
55 | AT2G43430 | glyoxalase 2-1 | glyoxalase 2-1, GLYOXALASE II | -0.76 | 0.34 | -0.32 | ||
56 | AT1G36380 | unknown protein; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 14 Blast hits to 14 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.75 | 0.31 | -0.3 | |||
57 | AT3G57490 | Ribosomal protein S5 family protein | 0.75 | 0.3 | -0.31 | |||
58 | AT1G05840 | Eukaryotic aspartyl protease family protein | -0.75 | 0.31 | -0.31 | |||
59 | AT4G30490 | AFG1-like ATPase family protein | -0.75 | 0.33 | -0.31 | |||
60 | AT4G02230 | Ribosomal protein L19e family protein | 0.75 | 0.31 | -0.32 | |||
61 | AT2G44370 | Cysteine/Histidine-rich C1 domain family protein | 0.75 | 0.32 | -0.31 | |||
62 | AT4G31460 | Ribosomal L28 family | 0.75 | 0.33 | -0.33 | |||
63 | AT3G11880 | Protein of unknown function DUF2359, transmembrane | -0.74 | 0.34 | -0.31 | |||
64 | AT4G22340 | cytidinediphosphate diacylglycerol synthase 2 | cytidinediphosphate diacylglycerol synthase 2 |
-0.74 | 0.31 | -0.32 | ||
65 | AT1G68600 | Aluminium activated malate transporter family protein | -0.74 | 0.32 | -0.34 | |||
66 | AT1G31550 | GDSL-like Lipase/Acylhydrolase superfamily protein | -0.74 | 0.32 | -0.31 | |||
67 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | -0.74 | 0.32 | -0.31 | ||
68 | AT5G16800 | Acyl-CoA N-acyltransferases (NAT) superfamily protein | -0.74 | 0.31 | -0.34 | |||
69 | AT5G49660 | Leucine-rich repeat transmembrane protein kinase family protein |
XYLEM INTERMIXED WITH PHLOEM 1 | -0.74 | 0.3 | -0.31 | ||
70 | AT3G47960 | Major facilitator superfamily protein | -0.74 | 0.31 | -0.32 | |||
71 | AT1G36370 | serine hydroxymethyltransferase 7 | serine hydroxymethyltransferase 7 | -0.74 | 0.32 | -0.32 | ||
72 | AT3G49580 | response to low sulfur 1 | RESPONSE TO LOW SULFUR 1 | -0.73 | 0.29 | -0.34 | ||
73 | AT5G24420 | 6-phosphogluconolactonase 5 | 6-phosphogluconolactonase 5 | -0.73 | 0.33 | -0.31 | ||
74 | AT3G21700 | Ras-related small GTP-binding family protein | ATSGP2, SGP2 | -0.73 | 0.32 | -0.31 | ||
75 | AT4G18050 | P-glycoprotein 9 | ATP-binding cassette B9, P-glycoprotein 9 |
-0.73 | 0.31 | -0.31 | ||
76 | AT5G11840 | Protein of unknown function (DUF1230) | -0.73 | 0.33 | -0.29 | |||
77 | AT1G50020 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 72 Blast hits to 72 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.33 | -0.32 | |||
78 | AT5G22850 | Eukaryotic aspartyl protease family protein | -0.73 | 0.32 | -0.31 | |||
79 | AT2G38050 | 3-oxo-5-alpha-steroid 4-dehydrogenase family protein | ATDET2, DE-ETIOLATED 2, DWARF 6 | -0.73 | 0.32 | -0.3 | ||
80 | AT1G30220 | inositol transporter 2 | ARABIDOPSIS THALIANA INOSITOL TRANSPORTER 2, inositol transporter 2 |
-0.73 | 0.33 | -0.3 | ||
81 | AT2G27830 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.31 | -0.31 | |||
82 | AT2G44130 | Galactose oxidase/kelch repeat superfamily protein | -0.73 | 0.31 | -0.32 | |||
83 | AT5G57190 | phosphatidylserine decarboxylase 2 | phosphatidylserine decarboxylase 2 | -0.72 | 0.31 | -0.3 | ||
84 | AT1G01260 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.72 | 0.33 | -0.33 | |||
85 | AT2G46030 | ubiquitin-conjugating enzyme 6 | ubiquitin-conjugating enzyme 6 | -0.72 | 0.31 | -0.3 | ||
86 | AT1G55280 | Lipase/lipooxygenase, PLAT/LH2 family protein | -0.72 | 0.33 | -0.32 | |||
87 | AT4G11960 | PGR5-like B | PGR5-like B | -0.72 | 0.31 | -0.32 | ||
88 | AT4G13260 | Flavin-binding monooxygenase family protein | YUCCA2 | -0.72 | 0.34 | -0.3 | ||
89 | AT5G13550 | sulfate transporter 4.1 | sulfate transporter 4.1 | -0.71 | 0.31 | -0.3 | ||
90 | AT1G04770 | Tetratricopeptide repeat (TPR)-like superfamily protein | -0.71 | 0.32 | -0.31 | |||
91 | AT1G76130 | alpha-amylase-like 2 | alpha-amylase-like 2, ARABIDOPSIS THALIANA ALPHA-AMYLASE-LIKE 2 |
-0.71 | 0.32 | -0.32 | ||
92 | AT5G57815 | Cytochrome c oxidase, subunit Vib family protein | -0.71 | 0.33 | -0.33 | |||
93 | AT1G19700 | BEL1-like homeodomain 10 | BEL1-like homeodomain 10, BEL1-LIKE HOMEODOMAIN 10 |
-0.71 | 0.31 | -0.31 | ||
94 | AT4G30390 | unknown protein; Has 22 Blast hits to 22 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.32 | |||
95 | AT1G76460 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.7 | 0.3 | -0.3 | |||
96 | AT2G21560 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G39190.1); Has 3685 Blast hits to 2305 proteins in 270 species: Archae - 0; Bacteria - 156; Metazoa - 1145; Fungi - 322; Plants - 177; Viruses - 6; Other Eukaryotes - 1879 (source: NCBI BLink). |
-0.7 | 0.33 | -0.32 | |||
97 | AT3G29350 | histidine-containing phosphotransmitter 2 | histidine-containing phosphotransmitter 2 |
-0.7 | 0.31 | -0.33 | ||
98 | AT3G14050 | RELA/SPOT homolog 2 | RELA-SPOT HOMOLOG 2, RELA/SPOT HOMOLOG 2, RELA/SPOT homolog 2 |
-0.7 | 0.33 | -0.31 | ||
99 | AT3G10260 | Reticulon family protein | -0.7 | 0.32 | -0.32 | |||
100 | AT4G18160 | Ca2+ activated outward rectifying K+ channel 6 | CA2+ ACTIVATED OUTWARD RECTIFYING K+ CHANNEL 6, ATTPK3, Ca2+ activated outward rectifying K+ channel 6, TPK3 |
-0.7 | 0.32 | -0.31 | ||
101 | AT3G63050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G48075.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.32 | -0.33 | |||
102 | AT2G24420 | DNA repair ATPase-related | -0.7 | 0.31 | -0.32 | |||
103 | AT5G13760 | Plasma-membrane choline transporter family protein | -0.7 | 0.32 | -0.32 | |||
104 | AT5G58670 | phospholipase C1 | ARABIDOPSIS THALIANA PHOSPHOLIPASE C, phospholipase C1, phospholipase C 1, phospholipase C1 |
-0.7 | 0.3 | -0.32 | ||
105 | AT3G57800 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein |
-0.7 | 0.32 | -0.32 | |||
106 | AT5G62850 | Nodulin MtN3 family protein | AtSWEET5, VEGETATIVE CELL EXPRESSED1, SWEET5 |
-0.7 | 0.3 | -0.31 | ||
107 | AT4G37270 | heavy metal atpase 1 | ARABIDOPSIS THALIANA HEAVY METAL ATPASE 1, heavy metal atpase 1 |
-0.69 | 0.31 | -0.32 | ||
108 | AT4G29670 | atypical CYS HIS rich thioredoxin 2 | atypical CYS HIS rich thioredoxin 2 |
-0.69 | 0.29 | -0.32 | ||
109 | AT5G02940 | Protein of unknown function (DUF1012) | -0.69 | 0.32 | -0.31 | |||
110 | AT5G48850 | Tetratricopeptide repeat (TPR)-like superfamily protein | SULPHUR DEFICIENCY-INDUCED 1 | -0.69 | 0.3 | -0.31 | ||
111 | AT5G18290 | Aquaporin-like superfamily protein | SIP1;2, SMALL AND BASIC INTRINSIC PROTEIN 1B |
-0.69 | 0.33 | -0.31 | ||
112 | AT5G13810 | Glutaredoxin family protein | -0.69 | 0.33 | -0.31 | |||
113 | AT5G01820 | serine/threonine protein kinase 1 | ATCIPK14, serine/threonine protein kinase 1, CBL-INTERACTING PROTEIN KINASE 14, SOS2-like protein kinase 24, SNF1-RELATED PROTEIN KINASE 3.15, serine/threonine protein kinase 1 |
-0.69 | 0.31 | -0.33 | ||
114 | AT2G25490 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1, FBL6 | -0.69 | 0.3 | -0.31 | ||
115 | AT5G65840 | Thioredoxin superfamily protein | -0.69 | 0.31 | -0.33 | |||
116 | AT2G29450 | glutathione S-transferase tau 5 | AT103-1A, ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 1, glutathione S-transferase tau 5, glutathione S-transferase tau 5 |
-0.69 | 0.33 | -0.3 | ||
117 | AT4G15440 | hydroperoxide lyase 1 | CYP74B2, hydroperoxide lyase 1 | -0.69 | 0.32 | -0.3 | ||
118 | AT3G54290 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE cation-binding motif (InterPro:IPR012312); Has 59 Blast hits to 59 proteins in 14 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.69 | 0.29 | -0.31 | |||
119 | AT3G23610 | dual specificity protein phosphatase 1 | dual specificity protein phosphatase 1 |
-0.69 | 0.3 | -0.33 | ||
120 | AT2G24860 | DnaJ/Hsp40 cysteine-rich domain superfamily protein | -0.69 | 0.28 | -0.32 | |||
121 | AT5G47730 | Sec14p-like phosphatidylinositol transfer family protein | -0.69 | 0.32 | -0.31 | |||
122 | AT2G14290 | F-box family protein with a domain of unknown function (DUF295) |
-0.69 | 0.33 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
123 | C0190 | O-acetyl-L-Serine | - | O-acetyl-L-Serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
-0.83 | 0.45 | -0.41 | ||
124 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
-0.77 | 0.46 | -0.49 |