AT1G70490 : ARFA1D
Query Information
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AGICode AT1G70490
Description Ras-related small GTP-binding family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G70490 Ras-related small GTP-binding family protein ARFA1D, ATARFA1D 1 0.34 -0.34
2 AT5G64813 Ras-related small GTP-binding family protein Light Insensitive Period1 0.85 0.33 -0.31
3 AT1G23490 ADP-ribosylation factor 1 ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR,
ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR 1A		 0.84 0.32 -0.3
4 AT4G34720 ATPase, F0/V0 complex, subunit C protein ATVHA-C1, AVA-P1, VACUOLAR
H+-PUMPING ATPASE C1		 0.83 0.29 -0.33
5 AT1G11650 RNA-binding (RRM/RBD/RNP motifs) family protein ATRBP45B, RBP45B 0.83 0.32 -0.31
6 AT2G32580 Protein of unknown function (DUF1068) 0.83 0.33 -0.33
7 AT1G80500 SNARE-like superfamily protein 0.81 0.31 -0.32
8 AT1G15370 SNARE-like superfamily protein 0.81 0.31 -0.31
9 AT2G47170 Ras-related small GTP-binding family protein ARF1A1C 0.78 0.31 -0.31
10 AT4G39990 RAB GTPase homolog A4B GTP-BINDING PROTEIN 3, ATRAB11G,
ARABIDOPSIS THALIANA RAB GTPASE
HOMOLOG A 4B, RAB GTPase homolog
A4B		 0.78 0.33 -0.32
11 AT4G35000 ascorbate peroxidase 3 ascorbate peroxidase 3 0.78 0.32 -0.3
12 AT2G46540 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, membrane; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 16 growth stages; Has 42 Blast hits to 42
proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.78 0.3 -0.3
13 AT3G07470 Protein of unknown function, DUF538 0.77 0.32 -0.3
14 AT4G29960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.77 0.31 -0.31
15 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A		 0.77 0.29 -0.33
16 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B		 0.76 0.32 -0.33
17 AT1G45688 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G42860.1); Has 258 Blast
hits to 242 proteins in 39 species: Archae - 0; Bacteria -
11; Metazoa - 10; Fungi - 14; Plants - 198; Viruses - 17;
Other Eukaryotes - 8 (source: NCBI BLink).		 0.76 0.32 -0.31
18 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein		 EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12		 0.76 0.33 -0.3
19 AT4G38920 vacuolar-type H(+)-ATPase C3 vacuolar-type H(+)-ATPase C3,
AVA-P3, vacuolar-type H(+)-ATPase
C3		 0.76 0.31 -0.34
20 AT3G08610 unknown protein; Has 40 Blast hits to 40 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 40; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.75 0.29 -0.3
21 AT3G51260 20S proteasome alpha subunit PAD1 20S proteasome alpha subunit PAD1 0.75 0.3 -0.33
22 AT5G32450 RNA binding (RRM/RBD/RNP motifs) family protein 0.75 0.3 -0.31
23 AT3G05000 Transport protein particle (TRAPP) component 0.75 0.3 -0.29
24 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.74 0.32 -0.29
25 AT1G03150 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.74 0.31 -0.31
26 AT1G78040 Pollen Ole e 1 allergen and extensin family protein 0.74 0.32 -0.33
27 AT3G22110 20S proteasome alpha subunit C1 20S proteasome alpha subunit C1 0.74 0.33 -0.3
28 AT4G30060 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.74 0.3 -0.33
29 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).		 0.74 0.31 -0.3
30 AT2G30010 TRICHOME BIREFRINGENCE-LIKE 45 TRICHOME BIREFRINGENCE-LIKE 45 0.73 0.32 -0.31
31 AT3G17390 S-adenosylmethionine synthetase family protein METHIONINE ADENOSYLTRANSFERASE 4,
METHIONINE OVER-ACCUMULATOR 3,
S-ADENOSYLMETHIONINE SYNTHETASE 3		 0.73 0.3 -0.31
32 AT4G14800 20S proteasome beta subunit D2 20S proteasome beta subunit D2 0.73 0.28 -0.29
33 AT4G25550 Cleavage/polyadenylation specificity factor, 25kDa subunit 0.73 0.32 -0.31
34 AT2G37975 Yos1-like protein 0.73 0.31 -0.31
35 AT2G38310 PYR1-like 4 PYR1-like 4, regulatory components
of ABA receptor 10		 0.73 0.3 -0.3
36 AT4G13520 small acidic protein 1 small acidic protein 1 0.73 0.33 -0.31
37 AT3G44540 fatty acid reductase 4 fatty acid reductase 4 -0.73 0.33 -0.31
38 AT1G56330 secretion-associated RAS 1B SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B,
ARABIDOPSIS THALIANA
SECRETION-ASSOCIATED RAS 1B,
SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B		 0.73 0.32 -0.33
39 AT5G62360 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.72 0.32 -0.31
40 AT1G33811 GDSL-like Lipase/Acylhydrolase superfamily protein 0.72 0.3 -0.32
41 AT5G63560 HXXXD-type acyl-transferase family protein -0.72 0.33 -0.3
42 AT3G18420 Protein prenylyltransferase superfamily protein 0.72 0.31 -0.31
43 AT1G33240 GT-2-like 1 GT2-LIKE 1, GT-2-like 1 0.72 0.3 -0.31
44 AT1G63170 Zinc finger, C3HC4 type (RING finger) family protein 0.72 0.3 -0.32
45 AT3G62560 Ras-related small GTP-binding family protein 0.72 0.32 -0.31
46 AT3G16100 RAB GTPase homolog G3C ATRAB7D, RAB GTPase homolog G3C,
RAB GTPase homolog G3C		 0.72 0.32 -0.33
47 AT4G36750 Quinone reductase family protein 0.71 0.33 -0.31
48 AT4G37880 LisH/CRA/RING-U-box domains-containing protein 0.71 0.31 -0.33
49 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.71 0.31 -0.3
50 AT2G21195 unknown protein; Has 28 Blast hits to 28 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.71 0.31 -0.32
51 AT5G09650 pyrophosphorylase 6 pyrophosphorylase 6,
pyrophosphorylase 6		 0.71 0.31 -0.31
52 AT4G12730 FASCICLIN-like arabinogalactan 2 FASCICLIN-like arabinogalactan 2 0.71 0.32 -0.33
53 AT5G03390 Protein of unknown function (DUF295) 0.7 0.3 -0.32
54 AT5G18520 Lung seven transmembrane receptor family protein 0.7 0.31 -0.32
55 AT5G46790 PYR1-like 1 PYR1-like 1, regulatory components
of ABA receptor 12		 0.7 0.3 -0.31
56 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 0.7 0.32 -0.3
57 AT1G76670 Nucleotide-sugar transporter family protein 0.7 0.3 -0.32
58 AT4G26410 Uncharacterised conserved protein UCP022280 0.7 0.31 -0.32
59 AT3G15060 RAB GTPase homolog A1G RAB GTPase homolog A1G, RAB GTPase
homolog A1G		 0.7 0.32 -0.3
60 AT1G14730 Cytochrome b561/ferric reductase transmembrane protein
family		 -0.7 0.3 -0.31
61 AT5G19760 Mitochondrial substrate carrier family protein 0.7 0.31 -0.33
62 AT1G10310 NAD(P)-binding Rossmann-fold superfamily protein 0.7 0.32 -0.31
63 AT1G23120 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.69 0.33 -0.3
64 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B		 -0.69 0.3 -0.3
65 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 0.69 0.31 -0.32
66 AT1G47260 gamma carbonic anhydrase 2 APFI, gamma carbonic anhydrase 2 0.69 0.32 -0.29
67 AT5G05820 Nucleotide-sugar transporter family protein 0.69 0.31 -0.32
68 AT4G16450 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: photorespiration; LOCATED IN: mitochondrion,
mitochondrial membrane, mitochondrial respiratory chain
complex I, respiratory chain complex I, membrane; EXPRESSED
IN: 25 plant structures; EXPRESSED DURING: 15 growth
stages; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.69 0.31 -0.31
69 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.3 -0.32
70 AT4G02020 SET domain-containing protein EZA1, SET DOMAIN-CONTAINING
PROTEIN 10, SWINGER		 -0.69 0.31 -0.31
71 AT3G09740 syntaxin of plants 71 ATSYP71, syntaxin of plants 71 0.69 0.32 -0.31
72 AT5G45540 Protein of unknown function (DUF594) 0.69 0.29 -0.33
73 AT1G04220 3-ketoacyl-CoA synthase 2 3-ketoacyl-CoA synthase 2 -0.69 0.29 -0.31
74 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.69 0.33 -0.3
75 AT5G15900 TRICHOME BIREFRINGENCE-LIKE 19 TRICHOME BIREFRINGENCE-LIKE 19 0.68 0.32 -0.32
76 AT5G49940 NIFU-like protein 2 CHLOROPLAST-LOCALIZED NIFU-LIKE
PROTEIN 2, NIFU-like protein 2		 0.68 0.32 -0.3
77 AT4G20780 calmodulin like 42 calmodulin like 42 0.68 0.31 -0.32
78 AT3G58550 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.68 0.31 -0.33
79 AT2G47810 nuclear factor Y, subunit B5 nuclear factor Y, subunit B5 -0.68 0.3 -0.35
80 AT1G23220 Dynein light chain type 1 family protein 0.68 0.3 -0.31
81 AT3G15710 Peptidase S24/S26A/S26B/S26C family protein 0.68 0.33 -0.31
82 AT5G64850 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: plasma membrane;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting
protein 4, defence response (InterPro:IPR008700); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins
in 780 species: Archae - 12; Bacteria - 1396; Metazoa -
17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other
Eukaryotes - 2996 (source: NCBI BLink).		 0.68 0.3 -0.31
83 AT3G26700 Protein kinase superfamily protein 0.68 0.3 -0.32
84 AT5G14790 ARM repeat superfamily protein 0.68 0.33 -0.3
85 AT3G62730 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 13 plant structures;
EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis,
LP.02 two leaves visible, petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G47980.1); Has 172 Blast hits
to 172 proteins in 41 species: Archae - 0; Bacteria - 73;
Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.68 0.3 -0.31
86 AT1G16030 heat shock protein 70B heat shock protein 70B -0.67 0.31 -0.33
87 AT2G25270 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
18 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT2G12400.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.67 0.33 -0.32
88 AT2G30500 Kinase interacting (KIP1-like) family protein -0.67 0.31 -0.31
89 AT3G62090 phytochrome interacting factor 3-like 2 PHYTOCHROME-INTERACTING FACTOR 6,
phytochrome interacting factor
3-like 2		 -0.67 0.31 -0.32
90 AT4G05100 myb domain protein 74 myb domain protein 74, myb domain
protein 74		 -0.67 0.29 -0.32
91 AT4G13810 receptor like protein 47 receptor like protein 47, receptor
like protein 47		 -0.67 0.32 -0.33
92 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 -0.66 0.31 -0.33
93 AT1G24600 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67920.1); Has 18 Blast hits
to 18 proteins in 5 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.66 0.31 -0.31
94 AT3G10740 alpha-L-arabinofuranosidase 1 ALPHA-L-ARABINOFURANOSIDASE,
ALPHA-L-ARABINOFURANOSIDASE 1,
alpha-L-arabinofuranosidase 1,
ARABIDOPSIS THALIANA
ALPHA-L-ARABINOFURANOSIDASE 1		 -0.65 0.32 -0.31
95 AT3G22830 heat shock transcription factor A6B ARABIDOPSIS THALIANA HEAT SHOCK
TRANSCRIPTION FACTOR A6B, heat
shock transcription factor A6B		 -0.64 0.3 -0.3
96 AT5G09530 hydroxyproline-rich glycoprotein family protein Pro-Glu-Leu|Ile|Val-Pro-Lys 1,
proline-rich protein 10		 -0.64 0.31 -0.32
97 AT1G54540 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 -0.64 0.33 -0.32
98 AT3G03170 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G24890.1); Has 184 Blast hits
to 184 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 184; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.63 0.31 -0.31
99 AT2G35170 Histone H3 K4-specific methyltransferase SET7/9 family
protein		 -0.63 0.3 -0.32
100 AT5G05160 Leucine-rich repeat protein kinase family protein REDUCED IN LATERAL GROWTH1 -0.63 0.29 -0.31
101 AT4G28040 nodulin MtN21 /EamA-like transporter family protein -0.63 0.31 -0.32
102 AT1G55740 seed imbibition 1 seed imbibition 1, raffinose
synthase 1, seed imbibition 1		 -0.63 0.29 -0.31
103 AT2G40900 nodulin MtN21 /EamA-like transporter family protein -0.62 0.31 -0.32
104 AT2G47260 WRKY DNA-binding protein 23 WRKY DNA-BINDING PROTEIN 23, WRKY
DNA-binding protein 23		 -0.62 0.31 -0.32
105 AT2G46200 unknown protein; Has 2968 Blast hits to 2381 proteins in
310 species: Archae - 16; Bacteria - 188; Metazoa - 1070;
Fungi - 227; Plants - 145; Viruses - 4; Other Eukaryotes -
1318 (source: NCBI BLink).		 -0.61 0.31 -0.29
106 AT5G40420 oleosin 2 OLEOSIN 2, oleosin 2 -0.61 0.32 -0.33
107 AT3G54320 Integrase-type DNA-binding superfamily protein ACTIVATOR OF SPO(MIN)::LUC1,
ATWRI1, WRINKLED, WRINKLED 1		 -0.61 0.32 -0.32
108 AT5G41040 HXXXD-type acyl-transferase family protein -0.6 0.31 -0.32
109 AT5G57840 HXXXD-type acyl-transferase family protein -0.6 0.32 -0.32
110 AT5G60210 ROP interactive partner 5 ROP interactive partner 5 -0.59 0.32 -0.31
111 AT3G45420 Concanavalin A-like lectin protein kinase family protein -0.59 0.31 -0.32
112 AT3G26860 Plant self-incompatibility protein S1 family -0.59 0.31 -0.32
113 AT1G21430 Flavin-binding monooxygenase family protein YUC11 -0.58 0.3 -0.3
114 AT5G57810 tetraspanin15 tetraspanin15 -0.58 0.31 -0.32
115 AT1G15330 Cystathionine beta-synthase (CBS) protein -0.58 0.3 -0.31
116 AT5G51680 hydroxyproline-rich glycoprotein family protein -0.57 0.32 -0.33
117 AT2G22510 hydroxyproline-rich glycoprotein family protein -0.57 0.29 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
118 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.7 0.46 -0.45 C0056
119 C0267 Zeatin cis-Zeatin cis-Zeatin cytokinins-O-glucoside biosynthesis,
cytokinins degradation,
cytokinins 7-N-glucoside biosynthesis,
cytokinins 9-N-glucoside biosynthesis,
cis-zeatin biosynthesis 		-0.67 0.44 -0.44 C0267