AGICode | AT1G47240 |
Description | NRAMP metal ion transporter 2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G47240 | NRAMP metal ion transporter 2 | ATNRAMP2, NRAMP metal ion transporter 2 |
1 | 0.31 | -0.3 | ||
2 | AT5G11780 | unknown protein; Has 37 Blast hits to 37 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 3; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.8 | 0.31 | -0.32 | |||
3 | AT3G58580 | DNAse I-like superfamily protein | 0.79 | 0.34 | -0.29 | |||
4 | AT1G80690 | PPPDE putative thiol peptidase family protein | -0.78 | 0.33 | -0.32 | |||
5 | AT1G01160 | GRF1-interacting factor 2 | GRF1-interacting factor 2 | -0.77 | 0.36 | -0.32 | ||
6 | AT1G14580 | C2H2-like zinc finger protein | 0.75 | 0.32 | -0.3 | |||
7 | AT1G22770 | gigantea protein (GI) | FB, GIGANTEA | 0.74 | 0.31 | -0.3 | ||
8 | AT3G58050 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41960.1); Has 13384 Blast hits to 8116 proteins in 546 species: Archae - 41; Bacteria - 766; Metazoa - 5596; Fungi - 1431; Plants - 589; Viruses - 46; Other Eukaryotes - 4915 (source: NCBI BLink). |
0.74 | 0.32 | -0.32 | |||
9 | AT2G16920 | ubiquitin-conjugating enzyme 23 | PHO2 FAMILY UBIQUITIN CONJUGATION ENZYME 2, ubiquitin-conjugating enzyme 23 |
0.74 | 0.33 | -0.31 | ||
10 | AT2G39940 | RNI-like superfamily protein | CORONATINE INSENSITIVE 1 | 0.73 | 0.33 | -0.31 | ||
11 | AT3G57890 | Tubulin binding cofactor C domain-containing protein | 0.73 | 0.28 | -0.33 | |||
12 | AT1G34550 | Protein of unknown function (DUF616) | EMBRYO DEFECTIVE 2756 | 0.73 | 0.32 | -0.3 | ||
13 | AT1G60890 | Phosphatidylinositol-4-phosphate 5-kinase family protein | 0.73 | 0.33 | -0.3 | |||
14 | AT5G10630 | Translation elongation factor EF1A/initiation factor IF2gamma family protein |
0.72 | 0.32 | -0.32 | |||
15 | AT3G12680 | floral homeotic protein (HUA1) | ENHANCER OF AG-4 1 | 0.72 | 0.31 | -0.31 | ||
16 | AT5G61960 | MEI2-like protein 1 | MEI2-like protein 1, MEI2-like protein 1 |
0.72 | 0.31 | -0.31 | ||
17 | AT2G40280 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.71 | 0.32 | -0.3 | |||
18 | AT1G53500 | NAD-dependent epimerase/dehydratase family protein | ARABIDOPSIS THALIANA MUCILAGE-MODIFIED 4, ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 2, MUCILAGE-MODIFIED 4, RHAMNOSE BIOSYNTHESIS 2 |
0.71 | 0.32 | -0.31 | ||
19 | AT4G02610 | Aldolase-type TIM barrel family protein | -0.7 | 0.32 | -0.32 | |||
20 | AT2G40400 | Protein of unknown function (DUF399 and DUF3411) | 0.7 | 0.31 | -0.31 | |||
21 | AT3G06410 | Zinc finger C-x8-C-x5-C-x3-H type family protein | 0.7 | 0.32 | -0.3 | |||
22 | AT4G33650 | dynamin-related protein 3A | ARABIDOPSIS DYNAMIN-LIKE 2, ABERRANT PEROXISOME MORPHOLOGY 1, dynamin-related protein 3A |
0.69 | 0.32 | -0.31 | ||
23 | AT2G22125 | binding | cellulose synthase-interactive protein 1, POM-POM 2 |
0.69 | 0.34 | -0.3 | ||
24 | AT3G09440 | Heat shock protein 70 (Hsp 70) family protein | 0.69 | 0.3 | -0.3 | |||
25 | AT1G48120 | hydrolases;protein serine/threonine phosphatases | 0.69 | 0.31 | -0.3 | |||
26 | AT3G58570 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.69 | 0.31 | -0.32 | |||
27 | AT3G10650 | BEST Arabidopsis thaliana protein match is: nucleoporin-related (TAIR:AT5G20200.1); Has 61042 Blast hits to 31782 proteins in 2093 species: Archae - 202; Bacteria - 16480; Metazoa - 16017; Fungi - 12552; Plants - 1653; Viruses - 629; Other Eukaryotes - 13509 (source: NCBI BLink). |
AtNUP1, NUP1 | 0.69 | 0.33 | -0.31 | ||
28 | AT5G02020 | Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). |
Salt Induced Serine rich | -0.69 | 0.32 | -0.32 | ||
29 | AT4G32290 | Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein |
-0.69 | 0.32 | -0.3 | |||
30 | AT5G28150 | Plant protein of unknown function (DUF868) | 0.69 | 0.33 | -0.3 | |||
31 | AT1G21660 | Chaperone DnaJ-domain superfamily protein | 0.69 | 0.33 | -0.34 | |||
32 | AT1G21380 | Target of Myb protein 1 | 0.68 | 0.33 | -0.32 | |||
33 | AT2G28520 | vacuolar proton ATPase A1 | vacuolar proton ATPase A1 | 0.68 | 0.3 | -0.31 | ||
34 | AT5G38840 | SMAD/FHA domain-containing protein | 0.68 | 0.31 | -0.31 | |||
35 | AT3G55320 | P-glycoprotein 20 | ATP-binding cassette B20, P-glycoprotein 20 |
0.68 | 0.31 | -0.32 | ||
36 | AT4G20300 | Protein of unknown function (DUF1639) | 0.68 | 0.33 | -0.32 | |||
37 | AT3G14790 | rhamnose biosynthesis 3 | ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 3, rhamnose biosynthesis 3 |
0.68 | 0.32 | -0.31 | ||
38 | AT1G61380 | S-domain-1 29 | S-domain-1 29 | 0.68 | 0.32 | -0.33 | ||
39 | AT5G50840 | CONTAINS InterPro DOMAIN/s: Taxilin (InterPro:IPR019132); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.68 | 0.35 | -0.3 | |||
40 | AT4G14220 | RING-H2 group F1A | RING-H2 group F1A | 0.67 | 0.33 | -0.32 | ||
41 | AT3G01040 | galacturonosyltransferase 13 | galacturonosyltransferase 13 | 0.67 | 0.3 | -0.32 | ||
42 | AT3G51550 | Malectin/receptor-like protein kinase family protein | FERONIA | 0.67 | 0.33 | -0.32 | ||
43 | AT1G51610 | Cation efflux family protein | 0.67 | 0.32 | -0.31 | |||
44 | AT1G72390 | CONTAINS InterPro DOMAIN/s: Spt20 family (InterPro:IPR021950); Has 8778 Blast hits to 7244 proteins in 477 species: Archae - 6; Bacteria - 326; Metazoa - 4198; Fungi - 1506; Plants - 923; Viruses - 22; Other Eukaryotes - 1797 (source: NCBI BLink). |
0.67 | 0.32 | -0.31 | |||
45 | AT3G07410 | RAB GTPase homolog A5B | RAB GTPase homolog A5B, RAB GTPase homolog A5B |
-0.67 | 0.31 | -0.31 | ||
46 | AT5G64270 | splicing factor, putative | 0.67 | 0.32 | -0.32 | |||
47 | AT3G15980 | Coatomer, beta' subunit | 0.66 | 0.33 | -0.33 | |||
48 | AT3G47520 | malate dehydrogenase | malate dehydrogenase, plastidic NAD-dependent malate dehydrogenase |
0.66 | 0.32 | -0.32 | ||
49 | AT2G37790 | NAD(P)-linked oxidoreductase superfamily protein | Aldo-keto reductase family 4 member C10 |
-0.66 | 0.31 | -0.31 | ||
50 | AT3G10380 | subunit of exocyst complex 8 | SUBUNIT OF EXOCYST COMPLEX 8, subunit of exocyst complex 8 |
0.66 | 0.34 | -0.31 | ||
51 | AT5G02810 | pseudo-response regulator 7 | APRR7, pseudo-response regulator 7 | 0.66 | 0.31 | -0.31 | ||
52 | AT1G20960 | U5 small nuclear ribonucleoprotein helicase, putative | embryo defective 1507 | 0.66 | 0.31 | -0.33 | ||
53 | AT5G10790 | ubiquitin-specific protease 22 | ubiquitin-specific protease 22 | 0.66 | 0.31 | -0.31 | ||
54 | AT4G12640 | RNA recognition motif (RRM)-containing protein | 0.65 | 0.31 | -0.31 | |||
55 | AT1G62740 | stress-inducible protein, putative | Hop2 | 0.65 | 0.29 | -0.32 | ||
56 | AT3G09650 | Tetratricopeptide repeat (TPR)-like superfamily protein | CRM3, HIGH CHLOROPHYLL FLUORESCENCE 152 |
0.65 | 0.33 | -0.32 | ||
57 | AT3G43300 | HOPM interactor 7 | HOPM interactor 7, BFA-VISUALIZED ENDOCYTIC TRAFFICKING DEFECTIVE1 |
0.65 | 0.33 | -0.31 | ||
58 | AT2G41960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G58050.1); Has 11991 Blast hits to 7260 proteins in 458 species: Archae - 17; Bacteria - 481; Metazoa - 5028; Fungi - 1325; Plants - 615; Viruses - 38; Other Eukaryotes - 4487 (source: NCBI BLink). |
0.65 | 0.29 | -0.31 | |||
59 | AT3G11650 | NDR1/HIN1-like 2 | NDR1/HIN1-like 2 | -0.65 | 0.31 | -0.31 | ||
60 | AT1G59580 | mitogen-activated protein kinase homolog 2 | mitogen-activated protein kinase homolog 2, mitogen-activated protein kinase homolog 2 |
-0.65 | 0.31 | -0.32 | ||
61 | AT1G51350 | ARM repeat superfamily protein | 0.65 | 0.31 | -0.31 | |||
62 | AT5G15400 | U-box domain-containing protein | 0.65 | 0.31 | -0.3 | |||
63 | AT4G27820 | beta glucosidase 9 | beta glucosidase 9 | 0.64 | 0.31 | -0.32 | ||
64 | AT2G27170 | Structural maintenance of chromosomes (SMC) family protein | STRUCTURAL MAINTENANCE OF CHROMOSOMES 3, TITAN7 |
0.64 | 0.32 | -0.32 | ||
65 | AT1G23000 | Heavy metal transport/detoxification superfamily protein | -0.64 | 0.3 | -0.3 | |||
66 | AT1G27930 | Protein of unknown function (DUF579) | 0.64 | 0.33 | -0.35 | |||
67 | AT2G42520 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.64 | 0.31 | -0.3 | |||
68 | AT3G06480 | DEAD box RNA helicase family protein | 0.64 | 0.31 | -0.32 | |||
69 | AT1G52240 | RHO guanyl-nucleotide exchange factor 11 | ATROPGEF11, phytochrome interacting RopGEF 1, RHO guanyl-nucleotide exchange factor 11 |
-0.64 | 0.33 | -0.31 | ||
70 | AT4G03550 | glucan synthase-like 5 | glucan synthase-like 5, ATGSL5, GSL05, glucan synthase-like 5, GLUCAN SYNTHASE-LIKE 5, POWDERY MILDEW RESISTANT 4 |
0.64 | 0.32 | -0.31 | ||
71 | AT1G06410 | trehalose-phosphatase/synthase 7 | trehalose-phosphatase/synthase 7, ATTPSA, TREHALOSE -6-PHOSPHATASE SYNTHASE S7, trehalose-phosphatase/synthase 7 |
0.64 | 0.32 | -0.34 | ||
72 | AT3G14200 | Chaperone DnaJ-domain superfamily protein | 0.63 | 0.3 | -0.32 | |||
73 | AT1G02460 | Pectin lyase-like superfamily protein | 0.63 | 0.3 | -0.29 | |||
74 | AT1G06000 | UDP-Glycosyltransferase superfamily protein | 0.63 | 0.34 | -0.3 | |||
75 | AT1G02270 | Calcium-binding endonuclease/exonuclease/phosphatase family | 0.63 | 0.3 | -0.31 | |||
76 | AT3G07080 | EamA-like transporter family | 0.63 | 0.31 | -0.32 | |||
77 | AT1G53400 | Ubiquitin domain-containing protein | 0.63 | 0.3 | -0.3 | |||
78 | AT1G67750 | Pectate lyase family protein | -0.63 | 0.3 | -0.32 | |||
79 | AT2G29080 | FTSH protease 3 | FTSH protease 3 | 0.62 | 0.31 | -0.32 | ||
80 | AT4G26510 | uridine kinase-like 4 | uridine kinase-like 4 | 0.62 | 0.31 | -0.31 | ||
81 | AT5G49500 | Signal recognition particle, SRP54 subunit protein | -0.62 | 0.29 | -0.31 | |||
82 | AT5G13390 | no exine formation 1 | NO EXINE FORMATION 1 | 0.62 | 0.33 | -0.29 | ||
83 | AT5G67470 | formin homolog 6 | ARABIDOPSIS FORMIN HOMOLOG 6, formin homolog 6 |
0.62 | 0.34 | -0.3 | ||
84 | AT1G54850 | HSP20-like chaperones superfamily protein | -0.62 | 0.31 | -0.34 | |||
85 | AT3G12040 | DNA-3-methyladenine glycosylase (MAG) | -0.62 | 0.32 | -0.31 | |||
86 | AT3G13750 | beta galactosidase 1 | beta galactosidase 1, beta-galactosidase 1 |
-0.62 | 0.33 | -0.31 | ||
87 | AT1G77600 | ARM repeat superfamily protein | 0.62 | 0.31 | -0.34 | |||
88 | AT5G53440 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.62 | 0.33 | -0.31 | |||
89 | AT1G53590 | Calcium-dependent lipid-binding (CaLB domain) family protein |
NTMC2T6.1, NTMC2TYPE6.1 | 0.61 | 0.33 | -0.3 | ||
90 | AT3G52640 | Zn-dependent exopeptidases superfamily protein | 0.61 | 0.33 | -0.31 | |||
91 | AT1G80570 | RNI-like superfamily protein | -0.61 | 0.35 | -0.3 | |||
92 | AT5G10490 | MSCS-like 2 | MSCS-like 2 | 0.61 | 0.3 | -0.32 | ||
93 | AT2G18470 | roline-rich extensin-like receptor kinase 4 | proline-rich extensin-like receptor kinase 4, proline-rich extensin-like receptor kinase 4 |
-0.61 | 0.31 | -0.28 | ||
94 | AT1G17350 | NADH:ubiquinone oxidoreductase intermediate-associated protein 30 |
-0.61 | 0.32 | -0.33 | |||
95 | AT5G01290 | mRNA capping enzyme family protein | 0.61 | 0.32 | -0.31 | |||
96 | AT1G43580 | Sphingomyelin synthetase family protein | -0.61 | 0.33 | -0.33 | |||
97 | AT1G09870 | histidine acid phosphatase family protein | 0.61 | 0.32 | -0.32 | |||
98 | AT1G78570 | rhamnose biosynthesis 1 | ARABIDOPSIS THALIANA RHAMNOSE BIOSYNTHESIS 1, rhamnose biosynthesis 1, REPRESSOR OF LRX1 1 |
0.61 | 0.3 | -0.3 | ||
99 | AT5G56610 | Phosphotyrosine protein phosphatases superfamily protein | -0.6 | 0.31 | -0.29 | |||
100 | AT2G20480 | unknown protein; Has 19 Blast hits to 19 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.31 | -0.32 | |||
101 | AT3G61860 | RNA-binding (RRM/RBD/RNP motifs) family protein | arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31, arginine/serine-rich splicing factor 31 |
-0.6 | 0.31 | -0.3 | ||
102 | AT2G44000 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
-0.59 | 0.32 | -0.31 | |||
103 | AT1G28400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G33850.1); Has 45374 Blast hits to 18870 proteins in 668 species: Archae - 72; Bacteria - 1460; Metazoa - 1191; Fungi - 1038; Plants - 174; Viruses - 64; Other Eukaryotes - 41375 (source: NCBI BLink). |
-0.59 | 0.33 | -0.34 | |||
104 | AT4G35550 | WUSCHEL related homeobox 13 | ATWOX13, HB-4, WUSCHEL related homeobox 13 |
-0.58 | 0.33 | -0.28 | ||
105 | AT4G26140 | beta-galactosidase 12 | beta-galactosidase 12 | -0.58 | 0.32 | -0.31 | ||
106 | AT5G06180 | Protein of unknown function (DUF1022) | -0.57 | 0.33 | -0.31 | |||
107 | AT1G12730 | GPI transamidase subunit PIG-U | -0.57 | 0.32 | -0.32 | |||
108 | AT1G53710 | Calcineurin-like metallo-phosphoesterase superfamily protein |
-0.57 | 0.32 | -0.31 | |||
109 | AT3G47950 | H(+)-ATPase 4 | H(+)-ATPase 4, H(+)-ATPase 4 | -0.57 | 0.31 | -0.34 | ||
110 | AT1G03850 | Glutaredoxin family protein | glutaredoxin 13, glutaredoxin 13 | -0.57 | 0.32 | -0.31 | ||
111 | AT1G15010 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01300.1); Has 71 Blast hits to 71 proteins in 13 species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 69; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.32 | |||
112 | AT1G52720 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits to 61 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.32 | -0.32 | |||
113 | AT5G53220 | unknown protein; Has 3099 Blast hits to 2528 proteins in 332 species: Archae - 2; Bacteria - 245; Metazoa - 1059; Fungi - 555; Plants - 177; Viruses - 49; Other Eukaryotes - 1012 (source: NCBI BLink). |
-0.57 | 0.3 | -0.33 | |||
114 | AT2G06010 | OBP3-responsive gene 4 | OBP3-responsive gene 4 | -0.57 | 0.32 | -0.33 | ||
115 | AT2G48100 | Exonuclease family protein | -0.56 | 0.32 | -0.32 | |||
116 | AT5G41400 | RING/U-box superfamily protein | -0.56 | 0.34 | -0.31 | |||
117 | AT3G13650 | Disease resistance-responsive (dirigent-like protein) family protein |
-0.54 | 0.3 | -0.31 | |||
118 | AT5G55130 | co-factor for nitrate, reductase and xanthine dehydrogenase 5 |
co-factor for nitrate, reductase and xanthine dehydrogenase 5, SIRTINOL RESISTANT 1 |
-0.54 | 0.3 | -0.32 | ||
119 | AT2G30280 | RNA-directed DNA methylation 4 | DEFECTIVE IN MERISTEM SILENCING 4, RNA-directed DNA methylation 4 |
-0.54 | 0.32 | -0.32 | ||
120 | AT5G02100 | Oxysterol-binding family protein | OSBP(OXYSTEROL BINDING PROTEIN)-RELATED PROTEIN 3A, UNFERTILIZED EMBRYO SAC 18 |
-0.54 | 0.31 | -0.33 | ||
121 | AT5G10750 | Protein of unknown function (DUF1336) | -0.53 | 0.31 | -0.31 | |||
122 | AT3G66658 | aldehyde dehydrogenase 22A1 | aldehyde dehydrogenase 22A1 | -0.53 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
123 | C0110 | Guanosine | - | Guanosine | guanosine nucleotides degradation I, guanine and guanosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage III |
0.7 | 0.47 | -0.41 |