AT2G43460 : -
Query Information
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AGICode AT2G43460
Description Ribosomal L38e protein family
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G43460 Ribosomal L38e protein family 1 0.31 -0.29
2 AT3G56340 Ribosomal protein S26e family protein 0.93 0.31 -0.31
3 AT4G14320 Zinc-binding ribosomal protein family protein 0.93 0.33 -0.33
4 AT5G27770 Ribosomal L22e protein family 0.9 0.35 -0.31
5 AT4G33865 Ribosomal protein S14p/S29e family protein 0.9 0.32 -0.32
6 AT5G58420 Ribosomal protein S4 (RPS4A) family protein 0.89 0.31 -0.32
7 AT1G34030 Ribosomal protein S13/S18 family 0.89 0.32 -0.32
8 AT3G23390 Zinc-binding ribosomal protein family protein 0.89 0.31 -0.3
9 AT5G61170 Ribosomal protein S19e family protein 0.89 0.3 -0.31
10 AT2G19750 Ribosomal protein S30 family protein 0.89 0.35 -0.32
11 AT1G18540 Ribosomal protein L6 family protein 0.89 0.33 -0.3
12 AT2G19730 Ribosomal L28e protein family 0.89 0.3 -0.32
13 AT3G53890 Ribosomal protein S21e 0.88 0.31 -0.31
14 AT2G25210 Ribosomal protein L39 family protein 0.88 0.31 -0.3
15 AT3G61620 3'-5'-exoribonuclease family protein RRP41 0.88 0.33 -0.35
16 AT5G03850 Nucleic acid-binding, OB-fold-like protein 0.88 0.33 -0.31
17 AT3G05590 ribosomal protein L18 ribosomal protein L18 0.88 0.31 -0.3
18 AT5G27850 Ribosomal protein L18e/L15 superfamily protein 0.87 0.3 -0.31
19 AT4G16720 Ribosomal protein L23/L15e family protein 0.87 0.31 -0.3
20 AT4G29410 Ribosomal L28e protein family 0.87 0.33 -0.32
21 AT2G20450 Ribosomal protein L14 0.87 0.32 -0.31
22 AT1G48830 Ribosomal protein S7e family protein 0.87 0.32 -0.3
23 AT5G64140 ribosomal protein S28 ribosomal protein S28 0.87 0.3 -0.31
24 AT2G27710 60S acidic ribosomal protein family 0.86 0.32 -0.32
25 AT1G04480 Ribosomal protein L14p/L23e family protein 0.86 0.31 -0.32
26 AT3G47370 Ribosomal protein S10p/S20e family protein 0.86 0.33 -0.33
27 AT4G27380 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.86 0.32 -0.33
28 AT3G09500 Ribosomal L29 family protein 0.86 0.32 -0.32
29 AT2G36620 ribosomal protein L24 ribosomal protein L24 0.86 0.32 -0.3
30 AT5G09510 Ribosomal protein S19 family protein 0.86 0.31 -0.33
31 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.86 0.32 -0.32
32 AT3G04400 Ribosomal protein L14p/L23e family protein embryo defective 2171 0.86 0.31 -0.31
33 AT2G32060 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.33 -0.32
34 AT5G19510 Translation elongation factor EF1B/ribosomal protein S6
family protein		 0.86 0.33 -0.33
35 AT4G00100 ribosomal protein S13A ribosomal protein S13A, POINTED
FIRST LEAF 2, RPS13, ribosomal
protein S13A		 0.86 0.33 -0.31
36 AT3G07110 Ribosomal protein L13 family protein 0.86 0.32 -0.32
37 AT2G47610 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.86 0.29 -0.34
38 AT1G54770 Fcf2 pre-rRNA processing protein 0.85 0.32 -0.3
39 AT2G45710 Zinc-binding ribosomal protein family protein 0.85 0.28 -0.3
40 AT3G60770 Ribosomal protein S13/S15 0.85 0.29 -0.33
41 AT5G02880 ubiquitin-protein ligase 4 ubiquitin-protein ligase 4 -0.85 0.31 -0.3
42 AT2G39390 Ribosomal L29 family protein 0.85 0.33 -0.31
43 AT1G11545 xyloglucan endotransglucosylase/hydrolase 8 xyloglucan
endotransglucosylase/hydrolase 8		 0.85 0.33 -0.32
44 AT1G04340 HR-like lesion-inducing protein-related 0.84 0.32 -0.3
45 AT1G69620 ribosomal protein L34 ribosomal protein L34 0.84 0.31 -0.32
46 AT2G27720 60S acidic ribosomal protein family 0.84 0.29 -0.31
47 AT1G75560 zinc knuckle (CCHC-type) family protein 0.84 0.32 -0.3
48 AT5G56670 Ribosomal protein S30 family protein 0.84 0.3 -0.29
49 AT1G21410 F-box/RNI-like superfamily protein SKP2A -0.84 0.32 -0.34
50 AT4G15000 Ribosomal L27e protein family 0.84 0.31 -0.32
51 AT5G22650 histone deacetylase 2B ARABIDOPSIS HISTONE DEACETYLASE 2,
ATHD2B, HISTONE DEACETYLASE 2,
histone deacetylase 2B, HDA4,
HDT02, HDT2		 0.84 0.3 -0.29
52 AT3G07910 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Reactive oxygen species modulator 1 (InterPro:IPR018450);
Has 192 Blast hits to 192 proteins in 80 species: Archae -
0; Bacteria - 0; Metazoa - 139; Fungi - 6; Plants - 39;
Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink).		 0.83 0.31 -0.31
53 AT4G34670 Ribosomal protein S3Ae 0.83 0.31 -0.33
54 AT2G41840 Ribosomal protein S5 family protein 0.83 0.32 -0.32
55 AT1G22930 T-complex protein 11 -0.83 0.29 -0.33
56 AT4G10450 Ribosomal protein L6 family 0.83 0.33 -0.33
57 AT5G47700 60S acidic ribosomal protein family 0.83 0.3 -0.3
58 AT5G26360 TCP-1/cpn60 chaperonin family protein 0.83 0.32 -0.31
59 AT3G10610 Ribosomal S17 family protein 0.83 0.31 -0.32
60 AT5G43970 translocase of outer membrane 22-V ATTOM22-V, translocase of outer
membrane 22-V, TRANSLOCASE OUTER
MITOCHONDRIAL MEMBRANE 22-V		 0.83 0.33 -0.31
61 AT1G28260 Telomerase activating protein Est1 -0.83 0.3 -0.31
62 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein		 0.83 0.31 -0.32
63 AT5G41970 Metal-dependent protein hydrolase 0.82 0.31 -0.3
64 AT4G31985 Ribosomal protein L39 family protein 0.82 0.33 -0.31
65 AT3G48930 Nucleic acid-binding, OB-fold-like protein embryo defective 1080 0.82 0.31 -0.34
66 AT4G09320 Nucleoside diphosphate kinase family protein NDPK1 0.82 0.32 -0.31
67 AT5G23900 Ribosomal protein L13e family protein 0.82 0.32 -0.31
68 AT1G44835 YbaK/aminoacyl-tRNA synthetase-associated domain 0.82 0.3 -0.3
69 AT5G03300 adenosine kinase 2 adenosine kinase 2 0.82 0.33 -0.32
70 AT1G22780 Ribosomal protein S13/S18 family POINTED FIRST LEAVES, POINTED
FIRST LEAVES 1, 40S RIBOSOMAL
PROTEIN S18		 0.82 0.31 -0.31
71 AT4G36210 Protein of unknown function (DUF726) -0.82 0.31 -0.3
72 AT5G08180 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.82 0.31 -0.3
73 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.82 0.31 -0.33
74 AT2G27840 histone deacetylase-related / HD-related HISTONE DEACETYLASE 13, HDT04,
HDT4		 0.82 0.3 -0.32
75 AT4G26230 Ribosomal protein L31e family protein 0.82 0.31 -0.34
76 AT4G30220 small nuclear ribonucleoprotein F small nuclear ribonucleoprotein F 0.81 0.32 -0.29
77 AT4G18070 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G29530.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.81 0.3 -0.31
78 AT1G72770 homology to ABI1 HYPERSENSITIVE TO ABA1 -0.81 0.29 -0.33
79 AT2G44860 Ribosomal protein L24e family protein 0.81 0.31 -0.34
80 AT5G44340 tubulin beta chain 4 tubulin beta chain 4 0.81 0.33 -0.3
81 AT5G07090 Ribosomal protein S4 (RPS4A) family protein 0.81 0.33 -0.32
82 AT1G03380 homolog of yeast autophagy 18 (ATG18) G homolog of yeast autophagy 18
(ATG18) G, homolog of yeast
autophagy 18 (ATG18) G		 -0.8 0.32 -0.31
83 AT3G51000 alpha/beta-Hydrolases superfamily protein -0.8 0.32 -0.32
84 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.8 0.33 -0.31
85 AT5G02870 Ribosomal protein L4/L1 family 0.8 0.3 -0.31
86 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.8 0.32 -0.31
87 AT3G18740 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein receptor-like kinase 902 0.8 0.32 -0.32
88 AT1G64090 Reticulan like protein B3 Reticulan like protein B3 0.8 0.33 -0.32
89 AT1G55890 Tetratricopeptide repeat (TPR)-like superfamily protein 0.8 0.31 -0.31
90 AT3G44880 Pheophorbide a oxygenase family protein with Rieske
[2Fe-2S] domain		 ACCELERATED CELL DEATH 1, LETHAL
LEAF-SPOT 1 HOMOLOG, PHEOPHORBIDE
A OXYGENASE		 -0.8 0.31 -0.31
91 AT1G22270 Trm112p-like protein 0.8 0.31 -0.31
92 AT4G19860 alpha/beta-Hydrolases superfamily protein -0.79 0.31 -0.3
93 AT5G59220 highly ABA-induced PP2C gene 1 highly ABA-induced PP2C gene 1,
senescence associated gene 113		 -0.79 0.34 -0.31
94 AT1G65660 Pre-mRNA splicing Prp18-interacting factor SWELLMAP 1 -0.79 0.31 -0.33
95 AT4G28490 Leucine-rich receptor-like protein kinase family protein HAESA, RECEPTOR-LIKE PROTEIN
KINASE 5		 -0.78 0.3 -0.31
96 AT1G15740 Leucine-rich repeat family protein -0.77 0.32 -0.31
97 AT5G65760 Serine carboxypeptidase S28 family protein -0.77 0.31 -0.33
98 AT1G22370 UDP-glucosyl transferase 85A5 UDP-glucosyl transferase 85A5,
UDP-glucosyl transferase 85A5		 -0.77 0.31 -0.28
99 AT4G33150 lysine-ketoglutarate reductase/saccharopine dehydrogenase
bifunctional enzyme		 LKR, LYSINE-KETOGLUTARATE
REDUCTASE/SACCHAROPINE
DEHYDROGENASE, SACCHAROPINE
DEHYDROGENASE		 -0.77 0.33 -0.34
100 AT1G58030 cationic amino acid transporter 2 cationic amino acid transporter 2 -0.76 0.32 -0.29
101 AT3G23920 beta-amylase 1 beta-amylase 1, BETA-AMYLASE 7,
TR-BAMY		 -0.76 0.32 -0.3
102 AT4G17970 aluminum-activated, malate transporter 12 aluminum-activated, malate
transporter 12, ATALMT12		 -0.76 0.31 -0.31
103 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.33 -0.29
104 AT1G18270 ketose-bisphosphate aldolase class-II family protein -0.76 0.31 -0.33
105 AT1G58180 beta carbonic anhydrase 6 A. THALIANA BETA CARBONIC
ANHYDRASE 6, beta carbonic
anhydrase 6		 -0.76 0.3 -0.32
106 AT2G40420 Transmembrane amino acid transporter family protein -0.75 0.31 -0.3
107 AT5G08380 alpha-galactosidase 1 alpha-galactosidase 1,
alpha-galactosidase 1		 -0.75 0.31 -0.32
108 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein -0.75 0.32 -0.32
109 AT3G09770 RING/U-box superfamily protein LOSS OF GDU 2 -0.75 0.34 -0.33
110 AT2G22660 Protein of unknown function (duplicated DUF1399) -0.75 0.31 -0.31
111 AT4G10050 esterase/lipase/thioesterase family protein -0.74 0.32 -0.33
112 AT2G37650 GRAS family transcription factor -0.74 0.3 -0.31
113 AT1G27150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.74 0.31 -0.35
114 AT3G57520 seed imbibition 2 seed imbibition 2, raffinose
synthase 2, seed imbibition 2		 -0.74 0.31 -0.29
115 AT3G19990 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: chloroplast stroma, chloroplast; EXPRESSED IN:
23 plant structures; EXPRESSED DURING: 13 growth stages;
Has 118 Blast hits to 118 proteins in 41 species: Archae -
0; Bacteria - 42; Metazoa - 0; Fungi - 0; Plants - 56;
Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink).		 -0.74 0.31 -0.3
116 AT3G26000 Ribonuclease inhibitor -0.74 0.29 -0.33
117 AT3G51310 VPS35 homolog C VPS35 homolog C -0.74 0.32 -0.31
118 AT1G09910 Rhamnogalacturonate lyase family protein -0.74 0.32 -0.32
119 AT4G29010 Enoyl-CoA hydratase/isomerase family ABNORMAL INFLORESCENCE MERISTEM -0.73 0.32 -0.32
120 AT2G37870 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.73 0.3 -0.33
121 AT1G12050 fumarylacetoacetase, putative -0.73 0.34 -0.32
122 AT5G01670 NAD(P)-linked oxidoreductase superfamily protein -0.72 0.32 -0.31
123 AT3G07350 Protein of unknown function (DUF506) -0.72 0.33 -0.32
124 AT1G80160 Lactoylglutathione lyase / glyoxalase I family protein glyoxylase I 7 -0.72 0.32 -0.32
125 AT1G53280 Class I glutamine amidotransferase-like superfamily protein DJ-1 homolog B, DJ-1 homolog B -0.72 0.31 -0.31
126 AT4G04960 Concanavalin A-like lectin protein kinase family protein -0.71 0.31 -0.32
127 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 -0.71 0.34 -0.33
128 AT4G23980 auxin response factor 9 auxin response factor 9 -0.71 0.33 -0.33
129 AT2G25450 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 -0.71 0.28 -0.33
130 AT3G54360 zinc ion binding -0.71 0.29 -0.3
131 AT2G35680 Phosphotyrosine protein phosphatases superfamily protein -0.71 0.33 -0.3
132 AT5G63560 HXXXD-type acyl-transferase family protein -0.7 0.3 -0.32
133 AT5G01990 Auxin efflux carrier family protein -0.7 0.31 -0.3
134 AT3G07870 F-box and associated interaction domains-containing protein -0.7 0.3 -0.33
135 AT1G80310 sulfate transmembrane transporters molybdate transporter 2 -0.7 0.33 -0.32
136 AT5G29000 Homeodomain-like superfamily protein PHR1-like 1 -0.7 0.31 -0.31
137 AT3G56140 Protein of unknown function (DUF399 and DUF3411) -0.7 0.33 -0.32
138 AT4G32150 vesicle-associated membrane protein 711 vesicle-associated membrane
protein 711, vesicle-associated
membrane protein 711		 -0.7 0.29 -0.32
139 AT1G78080 related to AP2 4 related to AP2 4, wound induced
dedifferentiation 1		 -0.7 0.33 -0.3
140 AT5G49650 xylulose kinase-2 xylulose kinase-2, XYLULOSE KINASE
2		 -0.69 0.33 -0.31
141 AT1G15060 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 -0.69 0.31 -0.31
142 AT3G01320 SIN3-like 1 SIN3-like 1 -0.69 0.3 -0.33
143 AT2G18370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.69 0.29 -0.32
144 AT5G10940 transducin family protein / WD-40 repeat family protein ALTERED SEED GERMINATION 2 -0.69 0.3 -0.3
145 AT1G54360 TBP-ASSOCIATED FACTOR 6B TBP-ASSOCIATED FACTOR 6B,
TBP-ASSOCIATED FACTOR 6B1,
TBP-ASSOCIATED FACTOR 6B2,
TBP-associated factor 6B4		 -0.69 0.31 -0.32
146 AT1G03090 methylcrotonyl-CoA carboxylase alpha chain, mitochondrial /
3-methylcrotonyl-CoA carboxylase 1 (MCCA)		 MCCA -0.69 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
147 C0217 Putative glucosinole - - - 0.85 0.44 -0.44
148 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.73 0.31 -0.33 C0054
149 C0137 Leucine L-Leucine L-Leucine indole-3-acetyl-amino acid biosynthesis,
leucine biosynthesis,
jasmonoyl-amino acid conjugates biosynthesis I,
IAA biosynthesis II,
tRNA charging,
leucine degradation I 		-0.72 0.32 -0.32 C0137
150 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.71 0.42 -0.48 C0099
151 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.69 0.45 -0.44 C0056