AT1G06740 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT1G06740
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G06740 transposable element gene 1 0.3 -0.3
2 AT4G07390 Mannose-P-dolichol utilization defect 1 protein -0.78 0.3 -0.32
3 AT2G26230 uricase / urate oxidase / nodulin 35, putative -0.76 0.31 -0.31
4 AT5G47200 RAB GTPase homolog 1A RAB GTPase homolog 1A, ARABIDOPSIS
RAB GTPASE HOMOLOG D2B, RAB GTPase
homolog 1A		 -0.76 0.32 -0.33
5 AT1G05950 unknown protein; Has 50 Blast hits to 45 proteins in 14
species: Archae - 5; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 34; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 0.74 0.32 -0.32
6 AT4G20330 Transcription initiation factor TFIIE, beta subunit -0.74 0.32 -0.34
7 AT1G11070 BEST Arabidopsis thaliana protein match is:
Hydroxyproline-rich glycoprotein family protein
(TAIR:AT1G61080.1); Has 579 Blast hits to 567 proteins in
152 species: Archae - 0; Bacteria - 68; Metazoa - 159;
Fungi - 113; Plants - 172; Viruses - 0; Other Eukaryotes -
67 (source: NCBI BLink).		 0.74 0.32 -0.34
8 AT3G54840 Ras-related small GTP-binding family protein ARA-6, ARA6, ATRAB5C, ATRABF1,
RABF1		 -0.74 0.3 -0.3
9 AT1G26830 cullin 3 cullin 3, cullin 3A, cullin 3,
cullin 3A		 -0.73 0.3 -0.31
10 AT1G25370 Protein of unknown function (DUF1639) -0.73 0.31 -0.3
11 AT3G55140 Pectin lyase-like superfamily protein -0.73 0.3 -0.31
12 AT2G36330 Uncharacterised protein family (UPF0497) -0.73 0.3 -0.3
13 AT1G23180 ARM repeat superfamily protein 0.72 0.32 -0.31
14 AT2G22480 phosphofructokinase 5 phosphofructokinase 5 -0.72 0.3 -0.33
15 AT2G45140 plant VAP homolog 12 plant VAP homolog 12 -0.72 0.3 -0.34
16 AT2G17760 Eukaryotic aspartyl protease family protein -0.72 0.33 -0.31
17 AT4G15470 Bax inhibitor-1 family protein -0.71 0.31 -0.33
18 AT2G38360 prenylated RAB acceptor 1.B4 prenylated RAB acceptor 1.B4 -0.71 0.31 -0.31
19 AT3G27430 N-terminal nucleophile aminohydrolases (Ntn hydrolases)
superfamily protein		 PBB1 -0.71 0.31 -0.31
20 AT4G27320 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS34, PHOS34 -0.71 0.32 -0.32
21 AT1G55540 Nuclear pore complex protein 0.7 0.31 -0.32
22 AT3G20010 SNF2 domain-containing protein / helicase domain-containing
protein / zinc finger protein-related		 0.7 0.31 -0.33
23 AT1G34220 Regulator of Vps4 activity in the MVB pathway protein -0.7 0.33 -0.31
24 AT4G29910 origin recognition complex protein 5 ATORC5, EMBRYO DEFECTIVE 2798,
origin recognition complex protein
5		 0.7 0.3 -0.31
25 AT5G07470 peptidemethionine sulfoxide reductase 3 ARABIDOPSIS THALIANA METHIONINE
SULFOXIDE REDUCTASE 3,
peptidemethionine sulfoxide
reductase 3		 -0.7 0.32 -0.33
26 AT3G17410 Protein kinase superfamily protein -0.7 0.32 -0.31
27 AT5G43280 delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
delta(3,5),delta(2,4)-dienoyl-CoA
isomerase 1,
DELTA(3,5),DELTA(2,4)-DIENOYL-COA
ISOMERASE 1		 -0.7 0.32 -0.31
28 AT1G52530 CONTAINS InterPro DOMAIN/s: Hus1-like protein
(InterPro:IPR007150); Has 129 Blast hits to 128 proteins in
49 species: Archae - 0; Bacteria - 0; Metazoa - 57; Fungi -
10; Plants - 47; Viruses - 0; Other Eukaryotes - 15
(source: NCBI BLink).		 0.7 0.33 -0.31
29 AT5G13000 glucan synthase-like 12 glucan synthase-like 12, callose
synthase 3, gsl12, glucan
synthase-like 12		 0.69 0.29 -0.31
30 AT1G70690 Receptor-like protein kinase-related family protein HOPW1-1-INDUCED GENE1,
PLASMODESMATA-LOCATED PROTEIN 5		 -0.69 0.29 -0.31
31 AT3G11780 MD-2-related lipid recognition domain-containing protein /
ML domain-containing protein		 -0.69 0.3 -0.29
32 AT2G42680 multiprotein bridging factor 1A ARABIDOPSIS THALIANA MULTIPROTEIN
BRIDGING FACTOR 1A, multiprotein
bridging factor 1A		 -0.69 0.34 -0.3
33 AT4G17170 RAB GTPase homolog B1C AT-RAB2, ARABIDOPSIS RAB GTPASE
HOMOLOG B1B, ATRAB2A, ATRABB1C,
RAB GTPASE HOMOLOG B1B, RAB2A, RAB
GTPase homolog B1C		 -0.69 0.29 -0.3
34 AT5G10800 RNA recognition motif (RRM)-containing protein 0.69 0.31 -0.34
35 AT3G49600 ubiquitin-specific protease 26 ATUBP26, SUP32, ubiquitin-specific
protease 26		 0.69 0.33 -0.31
36 AT1G09080 Heat shock protein 70 (Hsp 70) family protein binding protein 3 -0.69 0.33 -0.31
37 AT1G14000 VH1-interacting kinase VH1-interacting kinase -0.68 0.28 -0.31
38 AT4G13650 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.33 -0.3
39 AT5G63870 serine/threonine phosphatase 7 ATPP7, serine/threonine
phosphatase 7		 -0.68 0.31 -0.3
40 AT4G30600 signal recognition particle receptor alpha subunit family
protein		 -0.68 0.32 -0.32
41 AT4G39660 alanine:glyoxylate aminotransferase 2 alanine:glyoxylate
aminotransferase 2		 -0.68 0.32 -0.3
42 AT5G40920 pseudogene, disease resistance protein (TIR-NBS-LRR class),
putative, domain signature TIR-NBS-LRR exists, suggestive
of a disease resistance protein.		 0.68 0.32 -0.34
43 AT3G56160 Sodium Bile acid symporter family 0.68 0.32 -0.3
44 AT2G21480 Malectin/receptor-like protein kinase family protein 0.68 0.31 -0.32
45 AT5G22950 SNF7 family protein VPS24.1 -0.68 0.29 -0.3
46 AT5G16440 isopentenyl diphosphate isomerase 1 isopentenyl diphosphate isomerase
1		 -0.68 0.33 -0.29
47 AT5G40580 20S proteasome beta subunit PBB2 20S proteasome beta subunit PBB2 -0.68 0.3 -0.32
48 AT1G72820 Mitochondrial substrate carrier family protein 0.68 0.33 -0.3
49 AT1G32790 CTC-interacting domain 11 CTC-interacting domain 11 -0.68 0.31 -0.32
50 AT5G54430 Adenine nucleotide alpha hydrolases-like superfamily
protein		 ATPHOS32, PHOS32 -0.68 0.32 -0.32
51 AT2G43790 MAP kinase 6 MAP kinase 6, MAP kinase 6, MAP
kinase 6, MAP kinase 6		 -0.67 0.31 -0.32
52 AT5G40660 ATP12 protein-related -0.67 0.29 -0.33
53 AT1G59710 Protein of unknown function (DUF569) -0.67 0.32 -0.3
54 AT2G31320 poly(ADP-ribose) polymerase 2 ATPARP2, poly(ADP-ribose)
polymerase 2		 0.67 0.31 -0.3
55 AT3G22780 Tesmin/TSO1-like CXC domain-containing protein ATTSO1, CHINESE FOR 'UGLY' 0.67 0.33 -0.32
56 AT1G17090 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant
structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast
hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.31 -0.32
57 AT1G12140 flavin-monooxygenase glucosinolate S-oxygenase 5 flavin-monooxygenase glucosinolate
S-oxygenase 5		 -0.67 0.33 -0.32
58 AT3G17880 tetraticopeptide domain-containing thioredoxin ARABIDOPSIS THALIANA
HSP70-INTERACTING PROTEIN 2,
tetraticopeptide domain-containing
thioredoxin, HSC-70 INTERACTING
PROTEIN, tetraticopeptide
domain-containing thioredoxin		 -0.66 0.32 -0.32
59 AT3G55600 Membrane fusion protein Use1 -0.66 0.32 -0.33
60 AT5G42790 proteasome alpha subunit F1 ARSENIC TOLERANCE 5, ATPSM30,
proteasome alpha subunit F1		 -0.66 0.3 -0.32
61 AT1G17460 TRF-like 3 TRF-like 3 0.66 0.33 -0.32
62 AT1G78600 light-regulated zinc finger protein 1 B-box domain protein 22, DOUBLE
B-BOX 3, light-regulated zinc
finger protein 1, SALT TOLERANCE
HOMOLOG 3		 -0.66 0.3 -0.3
63 AT3G50590 Transducin/WD40 repeat-like superfamily protein -0.66 0.31 -0.32
64 AT1G64520 regulatory particle non-ATPase 12A regulatory particle non-ATPase 12A -0.65 0.31 -0.31
65 AT2G40680 transposable element gene 0.65 0.31 -0.32
66 AT3G29075 glycine-rich protein -0.65 0.33 -0.31
67 AT5G43320 casein kinase I-like 8 casein kinase I-like 8 -0.65 0.34 -0.29
68 AT4G08930 APR-like 6 APR-like 6, APR-like 6 -0.65 0.32 -0.3
69 AT3G55950 CRINKLY4 related 3 ATCRR3, CRINKLY4 related 3 -0.65 0.33 -0.31
70 AT1G03950 vacuolar protein sorting-associated protein 2.3 vacuolar protein
sorting-associated protein 2.3		 -0.65 0.33 -0.34
71 AT5G63920 topoisomerase 3alpha AtTOP3alpha, topoisomerase 3alpha 0.65 0.31 -0.31
72 AT3G30775 Methylenetetrahydrofolate reductase family protein AT-POX, ATPDH, ARABIDOPSIS
THALIANA PROLINE OXIDASE, EARLY
RESPONSIVE TO DEHYDRATION 5,
proline dehydrogenase 1, PRO1,
PROLINE DEHYDROGENASE		 -0.64 0.31 -0.31
73 AT1G77770 Protein of unknown function (DUF1644) -0.64 0.31 -0.31
74 AT2G23970 Class I glutamine amidotransferase-like superfamily protein -0.64 0.3 -0.33
75 AT1G43010 Pentatricopeptide repeat (PPR) superfamily protein 0.64 0.3 -0.32
76 AT1G79220 Mitochondrial transcription termination factor family
protein		 0.64 0.29 -0.32
77 AT5G03160 homolog of mamallian P58IPK homolog of mamallian P58IPK,
homolog of mamallian P58IPK		 -0.64 0.32 -0.3
78 AT2G20410 RNA-binding ASCH domain protein -0.64 0.33 -0.3
79 AT5G11890 FUNCTIONS IN: molecular_function unknown; LOCATED IN:
plasma membrane; EXPRESSED IN: 12 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: Late embryogenesis abundant
(LEA) hydroxyproline-rich glycoprotein family
(TAIR:AT1G17620.1); Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 EMBRYO DEFECTIVE 3135 0.64 0.29 -0.3
80 AT4G10970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23910.2); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.64 0.31 -0.3
81 AT2G36440 unknown protein; Has 3 Blast hits to 3 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.64 0.31 -0.33
82 AT1G75440 ubiquitin-conjugating enzyme 16 ubiquitin-conjugating enzyme 16 -0.64 0.31 -0.32
83 AT1G60570 Galactose oxidase/kelch repeat superfamily protein 0.64 0.3 -0.31
84 AT2G32970 unknown protein; Has 158 Blast hits to 154 proteins in 73
species: Archae - 0; Bacteria - 61; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 28; Other Eukaryotes - 14 (source:
NCBI BLink).		 0.64 0.31 -0.33
85 AT1G64860 sigma factor A RPOD1, RNA POLYMERASE SIGMA
SUBUNIT 1, RNApolymerase sigma
subunit 2, sigma factor A, SIGB		 0.64 0.32 -0.34
86 AT2G24360 Protein kinase superfamily protein -0.64 0.32 -0.3
87 AT4G11850 phospholipase D gamma 1 maternal effect embryo arrest 54,
phospholipase D gamma 1		 -0.64 0.32 -0.31
88 AT5G28700 transposable element gene 0.64 0.32 -0.3
89 AT4G24790 AAA-type ATPase family protein 0.63 0.33 -0.32
90 AT1G79880 RNA recognition motif (RRM)-containing protein 0.63 0.31 -0.3
91 AT4G19470 Leucine-rich repeat (LRR) family protein 0.63 0.31 -0.28
92 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.63 0.33 -0.31
93 ATCG00300 YCF9 YCF9 0.63 0.31 -0.34
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
94 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		-0.8 0.43 -0.48 C0220