AT1G01260 : -
Query Information
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AGICode AT1G01260
Description basic helix-loop-helix (bHLH) DNA-binding superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G01260 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 1 0.32 -0.31
2 AT1G76490 hydroxy methylglutaryl CoA reductase 1 AtHMGR1, hydroxy methylglutaryl
CoA reductase 1,
3-HYDROXY-3-METHYLGLUTARYL COA
REDUCTASE 1		 0.89 0.33 -0.29
3 AT3G02875 Peptidase M20/M25/M40 family protein IAA-LEUCINE RESISTANT 1 0.85 0.33 -0.34
4 AT5G05180 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G10880.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.85 0.31 -0.31
5 AT1G49300 RAB GTPase homolog G3E ARABIDOPSIS RAB GTPASE HOMOLOG 7,
ARABIDOPSIS RAB GTPASE HOMOLOG
G3E, RAB GTPase homolog G3E		 0.84 0.31 -0.3
6 AT4G30490 AFG1-like ATPase family protein 0.84 0.3 -0.35
7 AT5G61560 U-box domain-containing protein kinase family protein 0.84 0.32 -0.31
8 AT4G18050 P-glycoprotein 9 ATP-binding cassette B9,
P-glycoprotein 9		 0.83 0.31 -0.34
9 AT2G38050 3-oxo-5-alpha-steroid 4-dehydrogenase family protein ATDET2, DE-ETIOLATED 2, DWARF 6 0.83 0.31 -0.32
10 AT1G76070 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 8 plant structures; EXPRESSED
DURING: LP.04 four leaves visible, 4 anthesis, petal
differentiation and expansion stage; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G20310.1); Has 66 Blast hits to 66 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.83 0.32 -0.35
11 AT2G13650 golgi nucleotide sugar transporter 1 golgi nucleotide sugar transporter
1		 0.83 0.32 -0.33
12 AT1G01710 Acyl-CoA thioesterase family protein 0.82 0.35 -0.29
13 AT4G33090 aminopeptidase M1 aminopeptidase M1, AMINOPEPTIDASE
M1		 0.82 0.3 -0.31
14 AT3G06420 Ubiquitin-like superfamily protein autophagy 8h 0.82 0.33 -0.31
15 AT3G56620 nodulin MtN21 /EamA-like transporter family protein 0.82 0.3 -0.33
16 AT3G10370 FAD-dependent oxidoreductase family protein SUGAR-DEPENDENT 6 0.81 0.31 -0.33
17 AT3G06490 myb domain protein 108 myb domain protein 108,
BOTRYTIS-SUSCEPTIBLE1, myb domain
protein 108		 0.81 0.32 -0.31
18 AT3G24200 FAD/NAD(P)-binding oxidoreductase family protein 0.81 0.33 -0.33
19 AT1G54090 exocyst subunit exo70 family protein D2 exocyst subunit exo70 family
protein D2, exocyst subunit exo70
family protein D2		 0.81 0.32 -0.33
20 AT5G47730 Sec14p-like phosphatidylinositol transfer family protein 0.81 0.32 -0.3
21 AT4G21810 DERLIN-2.1 DERLIN-2.1 0.81 0.32 -0.32
22 AT4G15100 serine carboxypeptidase-like 30 serine carboxypeptidase-like 30 0.8 0.31 -0.31
23 AT3G51090 Protein of unknown function (DUF1640) 0.8 0.31 -0.3
24 AT4G30210 P450 reductase 2 AR2, P450 reductase 2 0.8 0.34 -0.31
25 AT1G16520 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT1G56080.1); Has 243 Blast
hits to 234 proteins in 69 species: Archae - 2; Bacteria -
2; Metazoa - 61; Fungi - 9; Plants - 125; Viruses - 0;
Other Eukaryotes - 44 (source: NCBI BLink).		 -0.8 0.31 -0.32
26 AT2G13360 alanine:glyoxylate aminotransferase alanine:glyoxylate
aminotransferase,
ALANINE:GLYOXYLATE
AMINOTRANSFERASE 1,
L-serine:glyoxylate
aminotransferase		 -0.8 0.33 -0.31
27 AT1G02970 WEE1 kinase homolog ATWEE1, WEE1 kinase homolog -0.8 0.3 -0.35
28 AT1G29670 GDSL-like Lipase/Acylhydrolase superfamily protein -0.8 0.33 -0.31
29 AT3G59710 NAD(P)-binding Rossmann-fold superfamily protein 0.8 0.32 -0.31
30 AT2G34920 RING/U-box superfamily protein embryo sac development arrest 18 -0.8 0.32 -0.32
31 AT3G55110 ABC-2 type transporter family protein ATP-binding cassette G18 0.8 0.3 -0.29
32 AT3G01410 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.8 0.31 -0.29
33 AT3G18630 uracil dna glycosylase uracil dna glycosylase, uracil dna
glycosylase		 -0.8 0.3 -0.29
34 AT3G60130 beta glucosidase 16 beta glucosidase 16 0.8 0.29 -0.33
35 AT1G75850 VPS35 homolog B VPS35 homolog B 0.79 0.33 -0.32
36 AT2G41490 UDP-glcnac-adolichol phosphate glcnac-1-p-transferase UDP-glcnac-adolichol phosphate
glcnac-1-p-transferase		 0.79 0.31 -0.3
37 AT1G54180 BREVIS RADIX-like 3 ARABIDOPSIS THALIANA BREVIS
RADIX-LIKE 3, BREVIS RADIX-like 3		 -0.79 0.33 -0.32
38 AT4G37430 cytochrome P450, family 91, subfamily A, polypeptide 2 CYTOCHROME P450 MONOOXYGENASE
81F1, cytochrome P450, family 91,
subfamily A, polypeptide 2		 0.79 0.33 -0.32
39 AT2G37860 Protein of unknown function (DUF3411) LOWER CELL DENSITY 1 -0.78 0.32 -0.31
40 AT5G24420 6-phosphogluconolactonase 5 6-phosphogluconolactonase 5 0.78 0.35 -0.31
41 AT5G59580 UDP-glucosyl transferase 76E1 UDP-glucosyl transferase 76E1 0.78 0.3 -0.31
42 AT5G32440 Ubiquitin system component Cue protein 0.78 0.31 -0.32
43 AT1G73080 PEP1 receptor 1 PEP1 RECEPTOR 1, PEP1 receptor 1 0.78 0.31 -0.3
44 AT2G31260 autophagy 9 (APG9) autophagy 9, ATAPG9 0.78 0.32 -0.33
45 AT3G03720 cationic amino acid transporter 4 cationic amino acid transporter 4 0.78 0.31 -0.31
46 AT1G64060 respiratory burst oxidase protein F respiratory burst oxidase protein
F, ARABIDOPSIS THALIANA
RESPIRATORY BURST OXIDASE HOMOLOG
F, respiratory burst oxidase
protein F, RBOHAP108, RESPIRATORY
BURST OXIDASE PROTEIN F		 0.78 0.29 -0.33
47 AT3G55070 LisH/CRA/RING-U-box domains-containing protein 0.77 0.31 -0.34
48 AT3G47730 ATP-binding cassette A2 ATP-binding cassette A2, A.
THALIANA ABC2 HOMOLOG 1, ABC2
homolog 1		 0.77 0.33 -0.33
49 AT4G11380 Adaptin family protein 0.77 0.32 -0.32
50 AT5G66460 Glycosyl hydrolase superfamily protein AtMAN7, endo-beta-mannase 7 -0.77 0.3 -0.33
51 AT4G30450 glycine-rich protein 0.77 0.31 -0.29
52 AT1G08920 ERD (early response to dehydration) six-like 1 ERD (early response to
dehydration) six-like 1		 0.77 0.3 -0.33
53 AT5G03610 GDSL-like Lipase/Acylhydrolase superfamily protein 0.77 0.32 -0.33
54 AT5G24800 basic leucine zipper 9 ARABIDOPSIS THALIANA BASIC LEUCINE
ZIPPER 9, basic leucine zipper 9,
BASIC LEUCINE ZIPPER O2 HOMOLOG 2		 0.77 0.33 -0.3
55 AT1G09310 Protein of unknown function, DUF538 -0.77 0.3 -0.34
56 AT5G11960 Protein of unknown function (DUF803) 0.77 0.32 -0.3
57 AT3G53960 Major facilitator superfamily protein 0.77 0.32 -0.3
58 AT5G55930 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 1, oligopeptide
transporter 1		 0.77 0.32 -0.3
59 AT4G39630 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.76 0.33 -0.32
60 AT4G28910 novel interactor of JAZ novel interactor of JAZ 0.76 0.33 -0.32
61 AT3G14205 Phosphoinositide phosphatase family protein 0.76 0.32 -0.3
62 AT4G13730 Ypt/Rab-GAP domain of gyp1p superfamily protein 0.76 0.34 -0.31
63 AT5G16910 cellulose-synthase like D2 ATCSLD2, cellulose-synthase like
D2		 0.76 0.33 -0.33
64 AT5G06260 TLD-domain containing nucleolar protein 0.76 0.31 -0.31
65 AT5G43190 Galactose oxidase/kelch repeat superfamily protein 0.76 0.32 -0.35
66 AT3G12400 Ubiquitin-conjugating enzyme/RWD-like protein ATELC, ELC 0.76 0.33 -0.34
67 AT1G76130 alpha-amylase-like 2 alpha-amylase-like 2, ARABIDOPSIS
THALIANA ALPHA-AMYLASE-LIKE 2		 0.76 0.29 -0.31
68 AT1G12810 proline-rich family protein 0.76 0.33 -0.31
69 AT4G11370 RING-H2 finger A1A RING-H2 finger A1A 0.76 0.33 -0.31
70 AT1G20880 RNA-binding (RRM/RBD/RNP motifs) family protein 0.76 0.33 -0.31
71 AT1G17620 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.76 0.31 -0.32
72 AT1G05620 uridine-ribohydrolase 2 nucleoside hydrolase 2,
uridine-ribohydrolase 2		 0.76 0.32 -0.32
73 AT5G16730 Plant protein of unknown function (DUF827) 0.76 0.32 -0.3
74 AT1G66570 sucrose-proton symporter 7 sucrose-proton symporter 7,
sucrose-proton symporter 7		 0.75 0.32 -0.33
75 AT2G01600 ENTH/ANTH/VHS superfamily protein 0.75 0.31 -0.32
76 AT4G22730 Leucine-rich repeat protein kinase family protein -0.75 0.33 -0.31
77 AT4G18160 Ca2+ activated outward rectifying K+ channel 6 CA2+ ACTIVATED OUTWARD RECTIFYING
K+ CHANNEL 6, ATTPK3, Ca2+
activated outward rectifying K+
channel 6, TPK3		 0.75 0.31 -0.3
78 AT3G29280 unknown protein; Has 24 Blast hits to 24 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.75 0.32 -0.3
79 AT4G28300 Protein of unknown function (DUF1421) 0.75 0.32 -0.31
80 AT5G11470 bromo-adjacent homology (BAH) domain-containing protein -0.75 0.32 -0.33
81 AT2G20920 Protein of unknown function (DUF3353) 0.75 0.32 -0.31
82 AT2G39700 expansin A4 ATEXP4, expansin A4, ATHEXP ALPHA
1.6, expansin A4		 -0.75 0.31 -0.33
83 AT5G18290 Aquaporin-like superfamily protein SIP1;2, SMALL AND BASIC INTRINSIC
PROTEIN 1B		 0.75 0.32 -0.32
84 AT3G19970 alpha/beta-Hydrolases superfamily protein 0.75 0.3 -0.33
85 AT4G28950 RHO-related protein from plants 9 Arabidopsis RAC-like 7, ATRAC7,
ATROP9, RAC7, RHO-related protein
from plants 9		 -0.75 0.31 -0.32
86 AT2G37570 HSP20-like chaperones superfamily protein sodium- and lithium-tolerant 1 0.75 0.31 -0.3
87 AT5G53850 haloacid dehalogenase-like hydrolase family protein 0.75 0.32 -0.28
88 AT3G20880 WIP domain protein 4 WIP domain protein 4 -0.75 0.31 -0.3
89 AT5G52890 AT hook motif-containing protein -0.74 0.34 -0.31
90 AT1G13790 XH/XS domain-containing protein factor of DNA methylation 4 -0.74 0.32 -0.3
91 AT2G38810 histone H2A 8 histone H2A 8 -0.74 0.3 -0.31
92 AT1G65490 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.74 0.32 -0.33
93 AT5G19530 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 ACAULIS 5 -0.74 0.32 -0.3
94 AT1G57820 Zinc finger (C3HC4-type RING finger) family protein ORTHRUS 2, VARIANT IN METHYLATION
1		 -0.74 0.32 -0.3
95 AT5G08640 flavonol synthase 1 ATFLS1, FLAVONOL SYNTHASE,
flavonol synthase 1		 -0.74 0.32 -0.32
96 AT3G28730 high mobility group high mobility group, high mobility
group, NUCLEOSOME/CHROMATIN
ASSEMBLY FACTOR D, SSRP1		 -0.74 0.31 -0.32
97 AT2G44440 Emsy N Terminus (ENT) domain-containing protein AtEML4, EMSY-like 4 -0.73 0.3 -0.33
98 AT2G22170 Lipase/lipooxygenase, PLAT/LH2 family protein -0.73 0.3 -0.33
99 AT1G07450 NAD(P)-binding Rossmann-fold superfamily protein -0.73 0.31 -0.32
100 AT4G28100 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
anchored to plasma membrane, anchored to membrane;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G18050.1); Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).		 -0.73 0.33 -0.32
101 AT4G11900 S-locus lectin protein kinase family protein -0.73 0.31 -0.32
102 AT5G53410 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52080.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.73 0.33 -0.33
103 AT1G64405 unknown protein; Has 13 Blast hits to 13 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.31 -0.32
104 AT2G35760 Uncharacterised protein family (UPF0497) -0.72 0.29 -0.31
105 AT5G46700 Tetraspanin family protein TETRASPANIN 1, TORNADO 2 -0.72 0.3 -0.32
106 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 -0.72 0.34 -0.34
107 AT2G25990 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 -0.72 0.31 -0.31
108 AT4G18910 NOD26-like intrinsic protein 1;2 NOD26-LIKE INTRINSIC PROTEIN 2,
NOD26-like intrinsic protein 1;2,
NOD26-LIKE INTRINSIC PROTEIN 2		 -0.71 0.3 -0.31
109 AT5G02760 Protein phosphatase 2C family protein -0.71 0.32 -0.31
110 AT3G02000 Thioredoxin superfamily protein ROXY1 -0.71 0.31 -0.3
111 AT4G24760 alpha/beta-Hydrolases superfamily protein -0.7 0.35 -0.31
112 AT4G24970 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 -0.7 0.31 -0.31
113 AT1G07650 Leucine-rich repeat transmembrane protein kinase -0.7 0.3 -0.3
114 AT5G10760 Eukaryotic aspartyl protease family protein -0.7 0.3 -0.34
115 AT1G16260 Wall-associated kinase family protein -0.7 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0237 Sinapyl alcohol - Sinapyl-alcohol monolignol glucosides biosynthesis,
phenylpropanoid biosynthesis 		0.89 0.43 -0.45 C0237
117 C0067 Citramalic acid (S)-(+)-, (R)-(-)-Citramalate (S)-Citramalate; (R)-Citramalate - 0.88 0.44 -0.44 C0067
118 C0265 Vitexin - - - 0.86 0.45 -0.44
119 C0128 Jasmonic acid (+/-)-Jasmonic acid (+)-Jasmonate; (-)-Jasmonate jasmonic acid biosynthesis 0.86 0.45 -0.46 C0128
120 C0190 O-acetyl-L-Serine - O-acetyl-L-Serine cysteine biosynthesis I,
seleno-amino acid biosynthesis 		0.82 0.44 -0.45 C0190
121 C0220 Pyruvic acid - Pyruvate sucrose degradation to ethanol and lactate (anaerobic),
alanine degradation II (to D-lactate),
alanine degradation III,
glutamine biosynthesis III,
pyruvate fermentation to ethanol II,
serine racemization,
methylerythritol phosphate pathway,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
valine biosynthesis,
seleno-amino acid biosynthesis,
phenylalanine degradation III,
an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate,
tetrahydrofolate biosynthesis II,
methylglyoxal degradation I,
glycolysis I,
tryptophan biosynthesis,
salicylate biosynthesis I,
pyruvate fermentation to lactate,
methionine biosynthesis II,
glutathione-mediated detoxification II,
IAA biosynthesis I,
TCA cycle variation V (plant),
Rubisco shunt,
gluconeogenesis I,
acetaldehyde biosynthesis I,
homocysteine and cysteine interconversion,
glycolysis IV (plant cytosol),
4-aminobutyrate degradation IV,
beta-alanine biosynthesis II,
isoleucine biosynthesis I (from threonine),
glutamate degradation IV,
lysine biosynthesis VI,
acetyl-CoA biosynthesis (from pyruvate),
alanine biosynthesis II 		0.79 0.45 -0.46 C0220
122 C0120 Isocitric acid - Isocitrate TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
glutamine biosynthesis III,
glyoxylate cycle 		0.79 0.46 -0.44 C0120