AT1G04790 : -
Query Information
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AGICode AT1G04790
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G04790 RING/U-box superfamily protein 1 0.3 -0.31
2 AT3G15410 Leucine-rich repeat (LRR) family protein 0.65 0.33 -0.31
3 AT5G49830 exocyst complex component 84B exocyst complex component 84B 0.64 0.3 -0.32
4 AT4G38740 rotamase CYP 1 rotamase CYP 1 -0.63 0.33 -0.32
5 AT5G13480 Transducin/WD40 repeat-like superfamily protein FY 0.62 0.31 -0.33
6 AT2G02820 myb domain protein 88 myb domain protein 88, myb domain
protein 88		 -0.62 0.32 -0.31
7 AT5G63200 tetratricopeptide repeat (TPR)-containing protein 0.62 0.32 -0.3
8 AT5G58100 unknown protein; INVOLVED IN: pollen exine formation;
EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 8
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT3G28720.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.6 0.34 -0.34
9 AT2G07720 transposable element gene -0.6 0.31 -0.32
10 AT1G12940 nitrate transporter2.5 nitrate transporter2.5, nitrate
transporter2.5		 0.6 0.32 -0.3
11 AT1G73660 protein tyrosine kinase family protein 0.6 0.3 -0.31
12 AT1G15280 CASC3/Barentsz eIF4AIII binding 0.59 0.35 -0.32
13 AT2G22720 SPT2 chromatin protein 0.58 0.31 -0.3
14 AT3G22450 Ribosomal L18p/L5e family protein 0.58 0.32 -0.33
15 AT4G23860 PHD finger protein-related 0.58 0.33 -0.34
16 AT1G61400 S-locus lectin protein kinase family protein 0.58 0.32 -0.32
17 AT3G08670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G51540.1); Has 48380 Blast
hits to 29827 proteins in 1356 species: Archae - 46;
Bacteria - 5589; Metazoa - 17361; Fungi - 13192; Plants -
2237; Viruses - 905; Other Eukaryotes - 9050 (source: NCBI
BLink).		 0.58 0.33 -0.29
18 AT5G23390 Plant protein of unknown function (DUF639) 0.58 0.3 -0.32
19 AT5G43440 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.33 -0.32
20 AT3G14800 transposable element gene 0.57 0.31 -0.3
21 AT4G04430 transposable element gene 0.57 0.31 -0.31
22 AT5G17080 Cysteine proteinases superfamily protein 0.56 0.3 -0.33
23 AT1G76880 Duplicated homeodomain-like superfamily protein 0.55 0.34 -0.31
24 AT1G63670 Protein of unknown function (DUF3741) 0.54 0.32 -0.29
25 AT2G39910 ARM repeat superfamily protein 0.54 0.32 -0.31
26 AT1G13070 putative cytochrome P450 cytochrome P450, family 71,
subfamily B, polypeptide 27		 0.54 0.31 -0.32
27 AT1G30860 RING/U-box superfamily protein -0.54 0.32 -0.33
28 AT3G20090 cytochrome P450, family 705, subfamily A, polypeptide 18 cytochrome P450, family 705,
subfamily A, polypeptide 18		 -0.53 0.32 -0.33
29 AT4G15880 Cysteine proteinases superfamily protein ATESD4, EARLY IN SHORT DAYS 4 0.53 0.31 -0.32
30 AT1G21850 SKU5 similar 8 SKU5 similar 8 -0.52 0.32 -0.33
31 AT5G55080 ras-related nuclear protein 4 ras-related nuclear protein 4,
ras-related nuclear protein 4		 0.52 0.32 -0.32
32 AT2G33690 Late embryogenesis abundant protein, group 6 0.52 0.3 -0.35
33 AT3G25450 transposable element gene 0.52 0.31 -0.33
34 AT4G00110 UDP-D-glucuronate 4-epimerase 3 UDP-D-glucuronate 4-epimerase 3 -0.51 0.34 -0.3
35 AT5G66260 SAUR-like auxin-responsive protein family -0.49 0.32 -0.3
36 AT4G00350 MATE efflux family protein -0.48 0.29 -0.33
37 AT2G23440 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: root; Has 25 Blast hits
to 25 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.47 0.31 -0.31
38 AT2G10370 transposable element gene -0.46 0.29 -0.31
39 AT2G02750 Pentatricopeptide repeat (PPR) superfamily protein -0.45 0.32 -0.31
40 AT4G27660 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G54150.1); Has 115 Blast hits
to 109 proteins in 25 species: Archae - 0; Bacteria - 0;
Metazoa - 10; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 5 (source: NCBI BLink).		 -0.44 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
41 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.65 0.42 -0.46 C0053