AGICode | AT1G26665 |
Description | Mediator complex, subunit Med10 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G26665 | Mediator complex, subunit Med10 | 1 | 0.3 | -0.32 | |||
2 | AT3G60300 | RWD domain-containing protein | 0.79 | 0.32 | -0.31 | |||
3 | AT5G13010 | RNA helicase family protein | embryo defective 3011 | 0.77 | 0.32 | -0.3 | ||
4 | AT5G66180 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.75 | 0.32 | -0.31 | |||
5 | AT2G29400 | type one protein phosphatase 1 | PROTEIN PHOSPHATASE 1, type one protein phosphatase 1 |
0.75 | 0.36 | -0.3 | ||
6 | AT4G23570 | phosphatase-related | SGT1A | -0.74 | 0.31 | -0.31 | ||
7 | AT3G44450 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52740.1); Has 63 Blast hits to 63 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.73 | 0.31 | -0.31 | |||
8 | AT4G15780 | vesicle-associated membrane protein 724 | vesicle-associated membrane protein 724, vesicle-associated membrane protein 724 |
0.71 | 0.31 | -0.33 | ||
9 | AT5G67380 | casein kinase alpha 1 | ATCKA1, casein kinase alpha 1 | 0.71 | 0.31 | -0.31 | ||
10 | AT5G59440 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
ARABIDOPSIS THALIANA THYMIDYLATE KINASE.1, ARABIDOPSIS THALIANA THYMIDYLATE KINASE.2, ZEUS1 |
0.71 | 0.33 | -0.32 | ||
11 | AT3G29030 | expansin A5 | ARABIDOPSIS THALIANA EXPANSIN 5, ARABIDOPSIS THALIANA EXPANSIN A5, ATHEXP ALPHA 1.4, EXPANSIN 5, expansin A5 |
-0.71 | 0.34 | -0.31 | ||
12 | AT4G24520 | P450 reductase 1 | ARABIDOPSIS CYTOCHROME REDUCTASE, P450 reductase 1 |
0.71 | 0.31 | -0.33 | ||
13 | AT1G65310 | xyloglucan endotransglucosylase/hydrolase 17 | XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE 17, xyloglucan endotransglucosylase/hydrolase 17 |
-0.7 | 0.33 | -0.34 | ||
14 | AT3G01770 | bromodomain and extraterminal domain protein 10 | bromodomain and extraterminal domain protein 10, bromodomain and extraterminal domain protein 10 |
0.7 | 0.3 | -0.31 | ||
15 | AT3G19100 | Protein kinase superfamily protein | 0.7 | 0.3 | -0.34 | |||
16 | AT2G33340 | MOS4-associated complex 3B | MOS4-associated complex 3B | 0.7 | 0.33 | -0.33 | ||
17 | AT4G31290 | ChaC-like family protein | 0.7 | 0.31 | -0.32 | |||
18 | AT4G35320 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G17300.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.7 | 0.34 | -0.31 | |||
19 | AT4G23200 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 | cysteine-rich RLK (RECEPTOR-like protein kinase) 12 |
-0.69 | 0.32 | -0.33 | ||
20 | AT4G18030 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.69 | 0.31 | -0.33 | |||
21 | AT1G51805 | Leucine-rich repeat protein kinase family protein | -0.69 | 0.33 | -0.3 | |||
22 | AT2G28910 | CAX interacting protein 4 | CAX interacting protein 4 | 0.69 | 0.32 | -0.31 | ||
23 | AT5G20520 | alpha/beta-Hydrolases superfamily protein | WAVY GROWTH 2 | 0.69 | 0.32 | -0.3 | ||
24 | AT4G32910 | CONTAINS InterPro DOMAIN/s: Nuclear pore complex protein, Nucleoporin Nup85-like (InterPro:IPR011502); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.69 | 0.34 | -0.31 | |||
25 | AT5G52060 | BCL-2-associated athanogene 1 | BCL-2-associated athanogene 1, BCL-2-associated athanogene 1 |
-0.68 | 0.3 | -0.32 | ||
26 | AT1G17680 | tetratricopeptide repeat (TPR)-containing protein | 0.68 | 0.32 | -0.34 | |||
27 | AT3G19190 | autophagy 2 | ATATG2, AUTOPHAGY 2 | 0.68 | 0.31 | -0.3 | ||
28 | AT5G03240 | polyubiquitin 3 | polyubiquitin 3 | 0.67 | 0.3 | -0.32 | ||
29 | AT2G25220 | Protein kinase superfamily protein | -0.67 | 0.33 | -0.31 | |||
30 | AT1G65060 | 4-coumarate:CoA ligase 3 | 4-coumarate:CoA ligase 3 | -0.67 | 0.3 | -0.31 | ||
31 | AT2G37340 | arginine/serine-rich zinc knuckle-containing protein 33 | arginine/serine-rich zinc knuckle-containing protein 33, ARGININE/SERINE-RICH ZINC KNUCKLE-CONTAINING PROTEIN 33, arginine/serine-rich zinc knuckle-containing protein 33, arginine/serine-rich zinc knuckle-containing protein 33 |
0.67 | 0.31 | -0.31 | ||
32 | AT1G23120 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
0.66 | 0.3 | -0.3 | |||
33 | AT5G16230 | Plant stearoyl-acyl-carrier-protein desaturase family protein |
-0.66 | 0.33 | -0.31 | |||
34 | AT2G05640 | transposable element gene | -0.66 | 0.34 | -0.31 | |||
35 | AT5G03760 | Nucleotide-diphospho-sugar transferases superfamily protein | ATCSLA09, ATCSLA9, CSLA09, CELLULOSE SYNTHASE LIKE A9, RESISTANT TO AGROBACTERIUM TRANSFORMATION 4 |
-0.66 | 0.33 | -0.3 | ||
36 | AT2G23670 | homolog of Synechocystis YCF37 | homolog of Synechocystis YCF37 | -0.66 | 0.31 | -0.31 | ||
37 | AT5G62220 | glycosyltransferase 18 | glycosyltransferase 18, glycosyltransferase 18 |
-0.66 | 0.35 | -0.34 | ||
38 | AT3G43720 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.66 | 0.29 | -0.32 | |||
39 | AT4G27260 | Auxin-responsive GH3 family protein | GH3.5, WES1 | 0.66 | 0.3 | -0.29 | ||
40 | AT1G19940 | glycosyl hydrolase 9B5 | glycosyl hydrolase 9B5, glycosyl hydrolase 9B5 |
-0.65 | 0.31 | -0.31 | ||
41 | AT5G42820 | Zinc finger C-x8-C-x5-C-x3-H type family protein | ATU2AF35B, U2AF35B | 0.65 | 0.31 | -0.31 | ||
42 | AT1G04430 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.65 | 0.33 | -0.33 | |||
43 | AT1G33050 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10470.1); Has 531 Blast hits to 229 proteins in 83 species: Archae - 0; Bacteria - 197; Metazoa - 59; Fungi - 50; Plants - 48; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). |
0.65 | 0.31 | -0.31 | |||
44 | AT5G09870 | cellulose synthase 5 | cellulose synthase 5 | -0.64 | 0.3 | -0.32 | ||
45 | AT1G18980 | RmlC-like cupins superfamily protein | 0.64 | 0.33 | -0.32 | |||
46 | AT2G18370 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
0.64 | 0.31 | -0.33 | |||
47 | AT5G19250 | Glycoprotein membrane precursor GPI-anchored | -0.64 | 0.29 | -0.32 | |||
48 | AT5G14390 | alpha/beta-Hydrolases superfamily protein | 0.63 | 0.32 | -0.33 | |||
49 | AT1G11700 | Protein of unknown function, DUF584 | -0.63 | 0.3 | -0.29 | |||
50 | AT3G23640 | heteroglycan glucosidase 1 | heteroglycan glucosidase 1 | 0.63 | 0.3 | -0.31 | ||
51 | AT1G09770 | cell division cycle 5 | ARABIDOPSIS THALIANA CELL DIVISION CYCLE 5, ARABIDOPSIS THALIANA MYB DOMAIN CELL DIVISION CYCLE 5, cell division cycle 5 |
0.63 | 0.32 | -0.33 | ||
52 | AT2G41090 | Calcium-binding EF-hand family protein | -0.63 | 0.32 | -0.32 | |||
53 | AT5G06980 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G12320.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.63 | 0.33 | -0.29 | |||
54 | AT3G23810 | S-adenosyl-l-homocysteine (SAH) hydrolase 2 | S-ADENOSYL-L-HOMOCYSTEINE (SAH) HYDROLASE 2, S-adenosyl-l-homocysteine (SAH) hydrolase 2 |
-0.63 | 0.31 | -0.32 | ||
55 | AT5G65660 | hydroxyproline-rich glycoprotein family protein | 0.63 | 0.32 | -0.3 | |||
56 | AT4G35930 | F-box family protein | -0.63 | 0.32 | -0.33 | |||
57 | AT5G19330 | ARM repeat protein interacting with ABF2 | ARM repeat protein interacting with ABF2 |
0.63 | 0.33 | -0.31 | ||
58 | AT1G61260 | Protein of unknown function (DUF761) | -0.63 | 0.32 | -0.31 | |||
59 | AT4G32160 | Phox (PX) domain-containing protein | 0.63 | 0.29 | -0.31 | |||
60 | AT2G35860 | FASCICLIN-like arabinogalactan protein 16 precursor | FASCICLIN-like arabinogalactan protein 16 precursor |
-0.63 | 0.3 | -0.36 | ||
61 | AT2G21320 | B-box zinc finger family protein | -0.62 | 0.33 | -0.3 | |||
62 | AT5G01790 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 19 plant structures; EXPRESSED DURING: 13 growth stages; Has 121 Blast hits to 121 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 121; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.62 | 0.32 | -0.33 | |||
63 | AT4G00360 | cytochrome P450, family 86, subfamily A, polypeptide 2 | ABERRANT INDUCTION OF TYPE THREE 1, cytochrome P450, family 86, subfamily A, polypeptide 2 |
-0.61 | 0.34 | -0.31 | ||
64 | AT3G16850 | Pectin lyase-like superfamily protein | -0.61 | 0.32 | -0.32 | |||
65 | AT3G09820 | adenosine kinase 1 | adenosine kinase 1, ATADK1 | -0.61 | 0.3 | -0.33 | ||
66 | AT2G40475 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G56260.2); Has 477 Blast hits to 219 proteins in 41 species: Archae - 0; Bacteria - 4; Metazoa - 91; Fungi - 61; Plants - 144; Viruses - 0; Other Eukaryotes - 177 (source: NCBI BLink). |
ALTERED SEED GERMINATION 8 | -0.61 | 0.34 | -0.31 | ||
67 | AT5G05840 | Protein of unknown function (DUF620) | -0.61 | 0.31 | -0.31 | |||
68 | AT2G25790 | Leucine-rich receptor-like protein kinase family protein | 0.61 | 0.31 | -0.33 | |||
69 | AT1G25450 | 3-ketoacyl-CoA synthase 5 | ECERIFERUM 60, 3-ketoacyl-CoA synthase 5 |
-0.61 | 0.3 | -0.31 | ||
70 | AT1G28360 | ERF domain protein 12 | ERF DOMAIN PROTEIN 12, ERF domain protein 12 |
0.61 | 0.31 | -0.3 | ||
71 | AT5G02220 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.61 | 0.31 | -0.31 | |||
72 | AT4G18250 | receptor serine/threonine kinase, putative | -0.6 | 0.33 | -0.29 | |||
73 | AT3G04980 | DNAJ heat shock N-terminal domain-containing protein | -0.6 | 0.3 | -0.33 | |||
74 | AT1G63980 | D111/G-patch domain-containing protein | 0.6 | 0.35 | -0.3 | |||
75 | AT3G16050 | pyridoxine biosynthesis 1.2 | A37, ARABIDOPSIS THALIANA PYRIDOXINE BIOSYNTHESIS 1.2, pyridoxine biosynthesis 1.2 |
-0.6 | 0.34 | -0.29 | ||
76 | AT1G61820 | beta glucosidase 46 | beta glucosidase 46 | 0.6 | 0.3 | -0.35 | ||
77 | AT2G18360 | alpha/beta-Hydrolases superfamily protein | 0.6 | 0.31 | -0.32 | |||
78 | AT5G62070 | IQ-domain 23 | IQ-domain 23 | -0.6 | 0.32 | -0.32 | ||
79 | AT2G02160 | CCCH-type zinc finger family protein | 0.6 | 0.3 | -0.33 | |||
80 | AT1G35290 | Thioesterase superfamily protein | -0.59 | 0.29 | -0.32 | |||
81 | AT2G25510 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.59 | 0.3 | -0.31 | |||
82 | AT2G23340 | DREB and EAR motif protein 3 | DREB and EAR motif protein 3 | -0.59 | 0.32 | -0.29 | ||
83 | AT5G64850 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.59 | 0.31 | -0.29 | |||
84 | AT4G14360 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.59 | 0.31 | -0.32 | |||
85 | AT2G23030 | SNF1-related protein kinase 2.9 | SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-9, SNF1-related protein kinase 2.9 |
0.59 | 0.29 | -0.33 | ||
86 | AT5G49760 | Leucine-rich repeat protein kinase family protein | -0.59 | 0.32 | -0.31 | |||
87 | AT1G23870 | trehalose-phosphatase/synthase 9 | trehalose-phosphatase/synthase 9, TREHALOSE -6-PHOSPHATASE SYNTHASE S9, trehalose-phosphatase/synthase 9 |
0.58 | 0.32 | -0.3 | ||
88 | AT1G60140 | trehalose phosphate synthase | trehalose phosphate synthase, trehalose phosphate synthase, TREHALOSE PHOSPHATE SYNTHASE 10 |
0.58 | 0.31 | -0.31 | ||
89 | AT1G08210 | Eukaryotic aspartyl protease family protein | 0.58 | 0.3 | -0.31 | |||
90 | AT5G60210 | ROP interactive partner 5 | ROP interactive partner 5 | 0.57 | 0.32 | -0.3 | ||
91 | AT5G14620 | domains rearranged methyltransferase 2 | DMT7, domains rearranged methyltransferase 2 |
0.57 | 0.31 | -0.31 | ||
92 | AT4G27130 | Translation initiation factor SUI1 family protein | 0.57 | 0.31 | -0.33 | |||
93 | AT3G29180 | Protein of unknown function (DUF1336) | 0.57 | 0.32 | -0.3 | |||
94 | AT1G13980 | sec7 domain-containing protein | EMBRYO DEFECTIVE 30, GNOM, VASCULAR NETWORK 7 |
0.57 | 0.34 | -0.32 | ||
95 | AT4G13030 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.57 | 0.29 | -0.32 | |||
96 | AT3G12120 | fatty acid desaturase 2 | fatty acid desaturase 2 | 0.57 | 0.31 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
97 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
0.83 | 0.46 | -0.45 | ||
98 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
0.65 | 0.45 | -0.45 | ||
99 | C0255 | Trehalose | α,α-D-Trehalose | Trehalose | trehalose degradation II (trehalase), trehalose biosynthesis I |
-0.59 | 0.31 | -0.32 |