AT1G63540 : -
Query Information
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AGICode AT1G63540
Description hydroxyproline-rich glycoprotein family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G63540 hydroxyproline-rich glycoprotein family protein 1 0.32 -0.32
2 AT1G65370 TRAF-like family protein -0.84 0.31 -0.3
3 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.79 0.33 -0.31
4 AT1G64270 transposable element gene -0.78 0.3 -0.33
5 AT5G20450 CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);
BEST Arabidopsis thaliana protein match is: Myosin family
protein with Dil domain (TAIR:AT5G20490.2); Has 1723 Blast
hits to 1458 proteins in 355 species: Archae - 28; Bacteria
- 353; Metazoa - 453; Fungi - 121; Plants - 353; Viruses -
3; Other Eukaryotes - 412 (source: NCBI BLink).		 -0.76 0.28 -0.31
6 AT4G13630 Protein of unknown function, DUF593 -0.74 0.32 -0.3
7 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.72 0.32 -0.31
8 AT5G35450 Disease resistance protein (CC-NBS-LRR class) family -0.72 0.29 -0.32
9 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 -0.72 0.31 -0.31
10 AT1G64300 Protein kinase family protein -0.72 0.31 -0.34
11 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein -0.71 0.28 -0.33
12 AT4G13050 Acyl-ACP thioesterase -0.71 0.32 -0.3
13 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family -0.68 0.31 -0.32
14 AT4G13070 RNA-binding CRS1 / YhbY (CRM) domain protein -0.68 0.31 -0.3
15 AT1G67550 urease urease -0.68 0.32 -0.3
16 AT1G50970 Membrane trafficking VPS53 family protein -0.68 0.32 -0.32
17 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 -0.68 0.32 -0.31
18 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 0.68 0.3 -0.33
19 AT5G24240 Phosphatidylinositol 3- and 4-kinase ;Ubiquitin family
protein		 0.67 0.32 -0.33
20 AT5G15980 Pentatricopeptide repeat (PPR) superfamily protein -0.67 0.33 -0.32
21 AT1G65280 DNAJ heat shock N-terminal domain-containing protein -0.67 0.32 -0.32
22 AT4G25020 D111/G-patch domain-containing protein -0.66 0.3 -0.32
23 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 -0.65 0.31 -0.33
24 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 -0.65 0.32 -0.31
25 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 -0.64 0.3 -0.33
26 AT5G20620 ubiquitin 4 ubiquitin 4 0.64 0.31 -0.3
27 AT4G11080 HMG (high mobility group) box protein 3xHigh Mobility Group-box1 -0.64 0.3 -0.32
28 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 -0.64 0.29 -0.34
29 AT5G37290 ARM repeat superfamily protein -0.64 0.31 -0.31
30 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 -0.64 0.31 -0.31
31 AT3G25490 Protein kinase family protein -0.63 0.3 -0.32
32 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 -0.63 0.32 -0.31
33 AT1G62670 rna processing factor 2 rna processing factor 2 -0.63 0.32 -0.3
34 AT3G42640 H(+)-ATPase 8 H(+)-ATPase 8, H(+)-ATPase 8 -0.62 0.29 -0.32
35 AT4G27050 F-box/RNI-like superfamily protein 0.62 0.32 -0.31
36 AT1G64190 6-phosphogluconate dehydrogenase family protein -0.62 0.32 -0.29
37 AT1G75420 UDP-Glycosyltransferase superfamily protein 0.62 0.31 -0.3
38 AT1G52600 Peptidase S24/S26A/S26B/S26C family protein 0.61 0.31 -0.33
39 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 -0.61 0.31 -0.3
40 AT4G03050 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 AOP3 0.61 0.3 -0.32
41 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 -0.61 0.3 -0.33
42 AT5G05890 UDP-Glycosyltransferase superfamily protein -0.61 0.33 -0.3
43 AT5G17240 SET domain group 40 SET domain group 40 -0.61 0.31 -0.34
44 AT1G62330 O-fucosyltransferase family protein -0.61 0.33 -0.34
45 AT5G27990 Pre-rRNA-processing protein TSR2, conserved region -0.61 0.32 -0.31
46 AT1G49630 presequence protease 2 presequence protease 2,
presequence protease 2		 -0.61 0.34 -0.29
47 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 -0.6 0.33 -0.33
48 AT4G22280 F-box/RNI-like superfamily protein 0.6 0.27 -0.33
49 AT5G02310 proteolysis 6 proteolysis 6 0.6 0.31 -0.29
50 AT1G43170 ribosomal protein 1 ribosomal protein 1, embryo
defective 2207, ribosomal protein
1, RPL3A		 -0.6 0.32 -0.29
51 AT1G67800 Copine (Calcium-dependent phospholipid-binding protein)
family		 0.6 0.32 -0.34
52 AT5G24760 GroES-like zinc-binding dehydrogenase family protein 0.59 0.33 -0.33
53 AT5G06265 hyaluronan mediated motility receptor-related -0.59 0.32 -0.31
54 AT5G37590 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.31 -0.32
55 AT5G02350 Cysteine/Histidine-rich C1 domain family protein -0.58 0.32 -0.32
56 AT1G52590 Putative thiol-disulphide oxidoreductase DCC 0.58 0.31 -0.32
57 AT5G40260 Nodulin MtN3 family protein AtSWEET8, SWEET8 -0.58 0.31 -0.32
58 AT4G21326 subtilase 3.12 subtilase 3.12, subtilase 3.12 -0.58 0.32 -0.33
59 AT5G27110 Tetratricopeptide repeat (TPR)-like superfamily protein -0.58 0.34 -0.31
60 AT2G26360 Mitochondrial substrate carrier family protein -0.58 0.32 -0.32
61 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 -0.57 0.32 -0.3
62 AT1G66620 Protein with RING/U-box and TRAF-like domains -0.57 0.32 -0.31
63 AT1G61730 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.57 0.35 -0.32
64 AT1G78970 lupeol synthase 1 ARABIDOPSIS THALIANA LUPEOL
SYNTHASE 1, lupeol synthase 1		 -0.57 0.32 -0.3
65 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.56 0.32 -0.31
66 AT1G79050 recA DNA recombination family protein 0.56 0.29 -0.31
67 AT4G13460 SU(VAR)3-9 homolog 9 SETDOMAIN GROUP 22, SET22,
SU(VAR)3-9 homolog 9		 -0.55 0.32 -0.32
68 AT1G78310 VQ motif-containing protein 0.55 0.33 -0.31
69 AT5G37130 Protein prenylyltransferase superfamily protein 0.55 0.33 -0.31
70 AT4G22960 Protein of unknown function (DUF544) 0.55 0.33 -0.31
71 AT5G26980 syntaxin of plants 41 ATSYP41, ATTLG2A, syntaxin of
plants 41		 -0.55 0.33 -0.31
72 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 -0.55 0.3 -0.32
73 AT1G66540 Cytochrome P450 superfamily protein -0.55 0.29 -0.32
74 AT1G52100 Mannose-binding lectin superfamily protein -0.54 0.3 -0.32
75 AT5G05750 DNAJ heat shock N-terminal domain-containing protein -0.54 0.3 -0.31
76 AT1G59960 NAD(P)-linked oxidoreductase superfamily protein -0.54 0.35 -0.33
77 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 -0.54 0.29 -0.32
78 AT5G18680 tubby like protein 11 tubby like protein 11, tubby like
protein 11		 0.54 0.32 -0.3
79 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein -0.54 0.3 -0.34
80 AT4G12460 OSBP(oxysterol binding protein)-related protein 2B OSBP(oxysterol binding
protein)-related protein 2B		 -0.53 0.35 -0.29
81 AT5G15920 structural maintenance of chromosomes 5 EMBRYO DEFECTIVE 2782, structural
maintenance of chromosomes 5		 -0.53 0.32 -0.3
82 AT2G05350 unknown protein; Has 22 Blast hits to 16 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.53 0.31 -0.33
83 AT4G32230 unknown protein; Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.53 0.34 -0.32
84 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.52 0.33 -0.32
85 AT2G31480 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G05894.1); Has 35333 Blast
hits to 34131 proteins in 2444 species: Archae - 798;
Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531;
Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).		 -0.52 0.3 -0.32
86 AT1G60670 Protein of unknown function (DUF3755) 0.52 0.3 -0.31
87 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 -0.52 0.32 -0.32
88 AT5G05980 DHFS-FPGS homolog B DHFS-FPGS homolog B, DHFS-FPGS
homolog B, folylpolyglutamate
synthetase 1		 -0.52 0.31 -0.32
89 AT4G04110 Toll-Interleukin-Resistance (TIR) domain family protein -0.52 0.32 -0.34
90 AT1G64490 DEK, chromatin associated protein -0.51 0.32 -0.31
91 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 -0.51 0.32 -0.3
92 AT1G63290 Aldolase-type TIM barrel family protein -0.51 0.31 -0.32
93 AT1G69780 Homeobox-leucine zipper protein family ATHB13 0.51 0.32 -0.32
94 AT1G61240 Protein of unknown function (DUF707) -0.51 0.33 -0.29
95 AT1G80900 magnesium transporter 1 MAGNESIUM TRANSPORTER 1, magnesium
transporter 1, MRS2-10		 0.5 0.32 -0.32
96 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.49 0.33 -0.3
97 AT3G42420 transposable element gene 0.48 0.31 -0.29
98 AT1G18410 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.47 0.29 -0.32
99 AT1G76230 unknown protein; Has 26 Blast hits to 18 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.46 0.31 -0.31
100 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 0.46 0.3 -0.34
101 AT2G07660 transposable element gene 0.45 0.32 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.86 0.48 -0.44 C0033
103 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine -0.85 0.44 -0.46 C0038
104 C0012 n-Eicosanoic acid - Arachidate fatty acid activation,
fatty acid ω-oxidation,
sporopollenin precursor biosynthesis,
acyl-ACP thioesterase pathway,
ceramide degradation,
fatty acid α-oxidation,
fatty acid ω-oxidation,
phospholipases,
triacylglycerol degradation 		0.74 0.44 -0.45 C0012
105 C0207 Phosphatidylglycerol-34:5 - - - 0.74 0.47 -0.46
106 C0183 MST_3033.1 - - - -0.72 0.47 -0.45
107 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine -0.66 0.3 -0.31 C0037
108 C0159 MST_1505.6 - - - -0.66 0.46 -0.43
109 C0162 MST_1588.3 - - - -0.65 0.43 -0.43
110 C0195 Phenylpyruvic acid - Phenylpyruvate phenylalanine degradation III -0.58 0.43 -0.41 C0195
111 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		-0.58 0.33 -0.33 C0244
112 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine -0.58 0.33 -0.33 C0034