AT1G08450 : A. thaliana calreticulin 3
Query Information
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AGICode AT1G08450
Description calreticulin 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08450 calreticulin 3 A. thaliana calreticulin 3,
calreticulin 3, EMS-MUTAGENIZED
BRI1 SUPPRESSOR 2, PRIORITY IN
SWEET LIFE 1		 1 0.3 -0.33
2 AT2G14560 Protein of unknown function (DUF567) LATE UPREGULATED IN RESPONSE TO
HYALOPERONOSPORA PARASITICA		 0.8 0.3 -0.32
3 AT5G60900 receptor-like protein kinase 1 receptor-like protein kinase 1 0.76 0.31 -0.31
4 AT5G03350 Legume lectin family protein 0.76 0.32 -0.3
5 AT1G23840 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: 18 plant structures; EXPRESSED DURING: 12 growth
stages; BEST Arabidopsis thaliana protein match is: unknown
protein (TAIR:AT1G23850.1); Has 53 Blast hits to 48
proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.75 0.31 -0.31
6 AT3G43800 glutathione S-transferase tau 27 glutathione S-transferase tau 27,
glutathione S-transferase tau 27		 0.75 0.33 -0.32
7 AT2G32680 receptor like protein 23 receptor like protein 23, receptor
like protein 23		 0.74 0.34 -0.31
8 AT5G54610 ankyrin ankyrin 0.73 0.33 -0.32
9 AT5G16990 Zinc-binding dehydrogenase family protein 0.73 0.33 -0.31
10 AT1G76960 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 9 plant structures;
EXPRESSED DURING: 8 growth stages; Has 8 Blast hits to 8
proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 8; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.73 0.31 -0.33
11 AT2G42390 protein kinase C substrate, heavy chain-related 0.72 0.34 -0.33
12 AT4G23610 Late embryogenesis abundant (LEA) hydroxyproline-rich
glycoprotein family		 0.72 0.33 -0.33
13 AT3G28940 AIG2-like (avirulence induced gene) family protein 0.7 0.31 -0.33
14 AT1G35710 Protein kinase family protein with leucine-rich repeat
domain		 0.7 0.33 -0.33
15 AT5G10380 RING/U-box superfamily protein ATRING1, RING1 0.69 0.32 -0.33
16 AT4G25330 unknown protein; Has 21 Blast hits to 21 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.69 0.31 -0.33
17 AT1G03370 C2 calcium/lipid-binding and GRAM domain containing protein 0.69 0.31 -0.32
18 AT4G38560 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.68 0.31 -0.3
19 AT2G18660 plant natriuretic peptide A AtPNP-A, plant natriuretic peptide
A		 0.67 0.31 -0.33
20 AT3G22231 pathogen and circadian controlled 1 PATHOGEN AND CIRCADIAN CONTROLLED
1		 0.67 0.33 -0.34
21 AT1G19960 BEST Arabidopsis thaliana protein match is: transmembrane
receptors (TAIR:AT2G32140.1); Has 41 Blast hits to 41
proteins in 17 species: Archae - 0; Bacteria - 2; Metazoa -
23; Fungi - 0; Plants - 11; Viruses - 0; Other Eukaryotes -
5 (source: NCBI BLink).		 0.66 0.32 -0.31
22 AT5G24530 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 DOWNY MILDEW RESISTANT 6 0.66 0.3 -0.34
23 AT3G16990 Haem oxygenase-like, multi-helical 0.66 0.3 -0.29
24 AT2G40600 appr-1-p processing enzyme family protein 0.66 0.33 -0.31
25 AT4G26070 MAP kinase/ ERK kinase 1 ATMEK1, MAP kinase/ ERK kinase 1,
MITOGEN ACTIVATED PROTEIN KINASE
KINASE 1, NMAPKK		 0.66 0.31 -0.32
26 AT3G56400 WRKY DNA-binding protein 70 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 70, WRKY
DNA-binding protein 70		 0.65 0.33 -0.31
27 AT1G13470 Protein of unknown function (DUF1262) 0.65 0.32 -0.32
28 AT4G14365 XB3 ortholog 4 in Arabidopsis thaliana XB3 ortholog 4 in Arabidopsis
thaliana		 0.65 0.31 -0.32
29 AT3G13130 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: male gametophyte; Has
140 Blast hits to 132 proteins in 41 species: Archae - 2;
Bacteria - 4; Metazoa - 29; Fungi - 20; Plants - 51;
Viruses - 0; Other Eukaryotes - 34 (source: NCBI BLink).		 0.65 0.3 -0.31
30 AT5G10760 Eukaryotic aspartyl protease family protein 0.65 0.32 -0.33
31 AT4G23220 cysteine-rich RLK (RECEPTOR-like protein kinase) 14 cysteine-rich RLK (RECEPTOR-like
protein kinase) 14		 0.65 0.33 -0.3
32 AT4G08470 MAPK/ERK kinase kinase 3 MAPKKK10, MAPK/ERK kinase kinase 3 0.64 0.32 -0.32
33 AT5G08305 Pentatricopeptide repeat (PPR) superfamily protein -0.64 0.31 -0.3
34 AT5G52750 Heavy metal transport/detoxification superfamily protein 0.63 0.31 -0.33
35 AT1G50380 Prolyl oligopeptidase family protein -0.63 0.33 -0.3
36 AT4G00355 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G45980.1); Has 100 Blast hits
to 97 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 100; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 ATG8-interacting protein 2 0.63 0.32 -0.32
37 AT5G02800 Protein kinase superfamily protein CDG1-like 1 0.63 0.3 -0.32
38 AT5G41770 crooked neck protein, putative / cell cycle protein,
putative		 -0.62 0.33 -0.32
39 AT2G38870 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.62 0.32 -0.31
40 AT1G69840 SPFH/Band 7/PHB domain-containing membrane-associated
protein family		 0.62 0.31 -0.31
41 AT2G40750 WRKY DNA-binding protein 54 WRKY DNA-BINDING PROTEIN 54, WRKY
DNA-binding protein 54		 0.62 0.31 -0.34
42 AT2G37710 receptor lectin kinase receptor lectin kinase 0.62 0.33 -0.33
43 AT3G12670 CTP synthase family protein embryo defective 2742 -0.62 0.31 -0.34
44 AT5G24210 alpha/beta-Hydrolases superfamily protein 0.62 0.29 -0.3
45 AT3G45290 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 3,
MILDEW RESISTANCE LOCUS O 3		 0.62 0.29 -0.31
46 AT3G47480 Calcium-binding EF-hand family protein 0.62 0.32 -0.32
47 AT1G73680 alpha dioxygenase alpha dioxygenase 0.62 0.33 -0.31
48 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 0.61 0.31 -0.36
49 AT1G15790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G15780.1); Has 170 Blast hits
to 94 proteins in 14 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 170; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.61 0.3 -0.31
50 AT3G60680 Plant protein of unknown function (DUF641) -0.61 0.33 -0.31
51 AT1G63980 D111/G-patch domain-containing protein -0.61 0.31 -0.32
52 AT5G62190 DEAD box RNA helicase (PRH75) PRH75 -0.61 0.33 -0.32
53 AT1G70520 cysteine-rich RLK (RECEPTOR-like protein kinase) 2 ALTERED SEED GERMINATION 6,
cysteine-rich RLK (RECEPTOR-like
protein kinase) 2		 0.61 0.35 -0.29
54 AT4G09500 UDP-Glycosyltransferase superfamily protein 0.61 0.35 -0.32
55 AT5G14430 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.61 0.32 -0.29
56 AT2G24160 pseudogene, leucine rich repeat protein family, contains
leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Cf-4
(Lycopersicon hirsutum) gi|2808683|emb|CAA05268; blastp
match of 37% identity and 8.4e-98 P-value to
GP|2808683|emb|CAA05268.1||AJ002235 Cf-4 {Lycopersicon
hirsutum}		 0.61 0.33 -0.33
57 AT2G21070 methyltransferases FIONA1 -0.61 0.31 -0.33
58 AT3G28540 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.31 -0.32
59 AT1G73805 Calmodulin binding protein-like SAR Deficient 1 0.6 0.29 -0.31
60 AT2G34700 Pollen Ole e 1 allergen and extensin family protein -0.6 0.27 -0.3
61 AT4G38550 Arabidopsis phospholipase-like protein (PEARLI 4) family 0.6 0.3 -0.31
62 AT2G43570 chitinase, putative chitinase, putative 0.6 0.31 -0.3
63 AT5G59720 heat shock protein 18.2 heat shock protein 18.2 0.6 0.34 -0.32
64 AT3G52180 dual specificity protein phosphatase (DsPTP1) family
protein		 ATPTPKIS1, ATSEX4,
DUAL-SPECIFICITY PROTEIN
PHOSPHATASE 4, STARCH-EXCESS 4		 0.6 0.33 -0.3
65 AT5G39020 Malectin/receptor-like protein kinase family protein 0.6 0.31 -0.31
66 AT4G04220 receptor like protein 46 receptor like protein 46, receptor
like protein 46		 0.6 0.29 -0.32
67 AT5G64800 CLAVATA3/ESR-RELATED 21 CLAVATA3/ESR-RELATED 21 0.6 0.32 -0.29
68 AT5G66660 Protein of unknown function (DUF677) -0.6 0.33 -0.31
69 AT1G36110 transposable element gene -0.6 0.32 -0.32
70 AT1G65500 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 14 plant structures;
EXPRESSED DURING: 9 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G65486.1); Has 23 Blast hits to 23 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.6 0.32 -0.32
71 AT1G49490 Leucine-rich repeat (LRR) family protein -0.59 0.3 -0.31
72 AT2G04000 transposable element gene 0.59 0.34 -0.31
73 AT5G32470 Haem oxygenase-like, multi-helical -0.59 0.32 -0.32
74 AT4G13750 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
family protein		 EMBRYO DEFECTIVE 2597, NO VEIN -0.59 0.31 -0.33
75 AT2G02560 cullin-associated and neddylation dissociated CULLIN-ASSOCIATED AND NEDDYLATION
DISSOCIATED 1, cullin-associated
and neddylation dissociated, ETA2,
HEMIVENATA, TIP120		 -0.59 0.33 -0.32
76 AT4G31330 Protein of unknown function, DUF599 0.59 0.3 -0.31
77 AT3G48090 alpha/beta-Hydrolases superfamily protein ATEDS1, enhanced disease
susceptibility 1		 0.58 0.33 -0.3
78 AT2G41620 Nucleoporin interacting component (Nup93/Nic96-like) family
protein		 -0.58 0.31 -0.3
79 AT2G14610 pathogenesis-related gene 1 PATHOGENESIS-RELATED GENE 1,
PATHOGENESIS-RELATED GENE 1,
pathogenesis-related gene 1		 0.58 0.3 -0.32
80 AT5G55170 small ubiquitin-like modifier 3 ATSUMO3, SMALL UBIQUITIN-LIKE
MODIFIER 3, SMALL UBIQUITIN-LIKE
MODIFIER 3, small ubiquitin-like
modifier 3		 0.58 0.31 -0.33
81 AT5G52760 Copper transport protein family 0.58 0.31 -0.31
82 AT4G30200 vernalization5/VIN3-like vernalization5/VIN3-like 1,
VIN3-Like 2		 -0.57 0.31 -0.3
83 AT2G27920 serine carboxypeptidase-like 51 serine carboxypeptidase-like 51 0.57 0.29 -0.33
84 AT4G26090 NB-ARC domain-containing disease resistance protein RESISTANT TO P. SYRINGAE 2 0.57 0.31 -0.3
85 AT4G13510 ammonium transporter 1;1 ammonium transporter 1;1,
ARABIDOPSIS THALIANA AMMONIUM
TRANSPORT 1, ATAMT1;1		 0.57 0.3 -0.33
86 AT4G17660 Protein kinase superfamily protein 0.57 0.31 -0.31
87 AT3G23010 receptor like protein 36 receptor like protein 36, receptor
like protein 36		 0.57 0.3 -0.33
88 AT1G21240 wall associated kinase 3 wall associated kinase 3 0.57 0.29 -0.32
89 AT1G29860 WRKY DNA-binding protein 71 WRKY DNA-BINDING PROTEIN 71, WRKY
DNA-binding protein 71		 0.57 0.31 -0.29
90 AT5G53370 pectin methylesterase PCR fragment F PECTIN METHYLESTERASE PCR FRAGMENT
F, pectin methylesterase PCR
fragment F		 0.57 0.31 -0.32
91 AT1G08210 Eukaryotic aspartyl protease family protein -0.57 0.32 -0.32
92 AT4G35910 Adenine nucleotide alpha hydrolases-like superfamily
protein		 -0.56 0.3 -0.34
93 AT5G22460 alpha/beta-Hydrolases superfamily protein 0.56 0.34 -0.32
94 AT3G21290 dentin sialophosphoprotein-related -0.56 0.3 -0.33
95 AT3G52420 outer envelope membrane protein 7 OUTER ENVELOPE MEMBRANE PROTEIN 7,
outer envelope membrane protein 7		 -0.56 0.32 -0.33
96 AT3G57260 beta-1,3-glucanase 2 AtPR2, BETA-1,3-GLUCANASE 2,
beta-1,3-glucanase 2,
PATHOGENESIS-RELATED PROTEIN 2,
PATHOGENESIS-RELATED PROTEIN 2		 0.56 0.32 -0.31
97 AT3G58350 RESTRICTED TEV MOVEMENT 3 RESTRICTED TEV MOVEMENT 3 0.55 0.32 -0.32
98 AT1G72060 serine-type endopeptidase inhibitors 0.55 0.33 -0.31
99 AT5G47680 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: tRNA
(guanine-N1-)-methyltransferase (InterPro:IPR016009), tRNA
(guanine-N(1)-)-methyltransferase, metazoa
(InterPro:IPR016653), tRNA (guanine-N1-)-methyltransferase,
eukaryotic (InterPro:IPR007356); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 AtTRM, tRNA modification 10 -0.55 0.33 -0.31
100 AT3G49130 SWAP (Suppressor-of-White-APricot)/surp RNA-binding
domain-containing protein		 0.55 0.32 -0.32
101 AT4G12640 RNA recognition motif (RRM)-containing protein -0.55 0.32 -0.31
102 AT3G18370 C2 domain-containing protein ATSYTF, NTMC2T3, NTMC2TYPE3, SYTF 0.55 0.33 -0.31
103 AT1G27595 CONTAINS InterPro DOMAIN/s: Symplekin tight junction
protein C-terminal (InterPro:IPR022075); BEST Arabidopsis
thaliana protein match is: HEAT repeat-containing protein
(TAIR:AT5G01400.1); Has 593 Blast hits to 297 proteins in
111 species: Archae - 0; Bacteria - 3; Metazoa - 139; Fungi
- 49; Plants - 57; Viruses - 0; Other Eukaryotes - 345
(source: NCBI BLink).		 -0.55 0.31 -0.32
104 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein -0.55 0.34 -0.33
105 AT3G12640 RNA binding (RRM/RBD/RNP motifs) family protein -0.54 0.32 -0.31
106 AT5G67440 Phototropic-responsive NPH3 family protein MAB4/ENP/NPY1-LIKE 2, NAKED PINS
IN YUC MUTANTS 3		 -0.54 0.3 -0.32
107 AT3G60030 squamosa promoter-binding protein-like 12 squamosa promoter-binding
protein-like 12		 -0.54 0.31 -0.29
108 AT2G44880 Pentatricopeptide repeat (PPR-like) superfamily protein -0.54 0.34 -0.29
109 AT2G36480 ENTH/VHS family protein -0.54 0.32 -0.33
110 AT2G06990 RNA helicase, ATP-dependent, SK12/DOB1 protein hua enhancer 2 -0.54 0.32 -0.3
111 AT1G30880 unknown protein; Has 24 Blast hits to 24 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.54 0.33 -0.33
112 AT1G02575 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02570.1).		 -0.54 0.32 -0.3
113 AT5G59830 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13660.2); Has 174 Blast hits
to 139 proteins in 16 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 172; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.53 0.32 -0.31
114 AT1G63150 Tetratricopeptide repeat (TPR)-like superfamily protein -0.53 0.31 -0.31
115 AT1G49245 Prefoldin chaperone subunit family protein -0.53 0.32 -0.32
116 AT5G46940 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.52 0.33 -0.32
117 AT1G48410 Stabilizer of iron transporter SufD / Polynucleotidyl
transferase		 ARGONAUTE 1 -0.52 0.3 -0.31
118 AT2G45380 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: cellular_component
unknown; EXPRESSED IN: inflorescence meristem, flower,
cultured cell; EXPRESSED DURING: petal differentiation and
expansion stage; BEST Arabidopsis thaliana protein match
is: Calcium-binding EF-hand family protein
(TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in
31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi -
0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink).		 -0.52 0.31 -0.32
119 AT5G17410 Spc97 / Spc98 family of spindle pole body (SBP) component -0.52 0.31 -0.33
120 AT3G10470 C2H2-type zinc finger family protein -0.52 0.31 -0.31
121 AT4G33760 tRNA synthetase class II (D, K and N) family protein -0.52 0.3 -0.3
122 AT4G29840 Pyridoxal-5'-phosphate-dependent enzyme family protein METHIONINE OVER-ACCUMULATOR 2,
THREONINE SYNTHASE		 -0.51 0.3 -0.33
123 AT3G60330 H(+)-ATPase 7 H(+)-ATPase 7, H(+)-ATPase 7 -0.51 0.31 -0.31
124 AT1G79630 Protein phosphatase 2C family protein -0.51 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
125 C0138 Linarin - - - -0.77 0.44 -0.47
126 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III 		0.7 0.45 -0.46 C0110