AT1G76290 : -
Query Information
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AGICode AT1G76290
Description AMP-dependent synthetase and ligase family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G76290 AMP-dependent synthetase and ligase family protein 1 0.31 -0.31
2 AT3G17290 transposable element gene 0.82 0.32 -0.3
3 AT1G68090 annexin 5 annexin 5, ANNEXIN ARABIDOPSIS
THALIANA 5		 0.8 0.31 -0.32
4 AT3G32220 transposable element gene -0.76 0.3 -0.33
5 AT3G45440 Concanavalin A-like lectin protein kinase family protein 0.75 0.3 -0.29
6 AT3G04200 RmlC-like cupins superfamily protein 0.74 0.33 -0.33
7 AT5G11360 Interleukin-1 receptor-associated kinase 4 protein 0.73 0.33 -0.32
8 AT4G38170 FAR1-related sequence 9 FAR1-related sequence 9 0.73 0.32 -0.31
9 AT4G30590 early nodulin-like protein 12 AtENODL12, early nodulin-like
protein 12		 0.73 0.3 -0.32
10 AT3G20020 protein arginine methyltransferase 6 ARABIDOPSIS THALIANA PROTEIN
ARGININE METHYLTRANSFERASE 6,
protein arginine methyltransferase
6		 0.72 0.32 -0.3
11 AT3G45500 BEST Arabidopsis thaliana protein match is: RING/U-box
protein with C6HC-type zinc finger (TAIR:AT3G45580.1); Has
48 Blast hits to 46 proteins in 4 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.3 -0.31
12 AT3G43120 SAUR-like auxin-responsive protein family 0.72 0.31 -0.33
13 AT3G19880 F-box and associated interaction domains-containing protein 0.71 0.33 -0.31
14 AT2G13230 transposable element gene -0.71 0.31 -0.32
15 AT3G12440 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 0.7 0.32 -0.32
16 AT3G42700 transposable element gene 0.7 0.32 -0.33
17 AT1G68750 phosphoenolpyruvate carboxylase 4 phosphoenolpyruvate carboxylase 4,
phosphoenolpyruvate carboxylase 4		 0.7 0.33 -0.33
18 AT3G44740 Class II aaRS and biotin synthetases superfamily protein 0.7 0.33 -0.35
19 AT1G34080 transposable element gene 0.7 0.32 -0.3
20 AT5G49440 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.7 0.33 -0.3
21 AT3G44910 cation/H+ exchanger 12 ATCHX12, cation/H+ exchanger 12 0.7 0.3 -0.32
22 AT1G54140 TATA binding protein associated factor 21kDa subunit TBP-ASSOCIATED FACTOR 9, TATA
binding protein associated factor
21kDa subunit		 -0.69 0.33 -0.33
23 AT3G46960 RNA helicase, ATP-dependent, SK12/DOB1 protein 0.69 0.31 -0.31
24 AT2G26630 transposable element gene 0.68 0.32 -0.33
25 AT3G13820 F-box and associated interaction domains-containing protein 0.68 0.32 -0.32
26 AT5G30520 unknown protein; Has 50 Blast hits to 50 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.68 0.31 -0.3
27 AT3G42350 transposable element gene 0.67 0.29 -0.3
28 AT5G27100 glutamate receptor 2.1 ARABIDOPSIS THALIANA GLUTAMATE
RECEPTOR 2.1, glutamate receptor
2.1		 0.67 0.33 -0.31
29 AT4G08650 transposable element gene 0.67 0.28 -0.33
30 AT4G15730 CW-type Zinc Finger 0.67 0.3 -0.31
31 AT1G32030 Domain of unknown function (DUF313) 0.66 0.31 -0.31
32 AT4G39930 unknown protein; Has 4 Blast hits to 4 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.66 0.31 -0.3
33 AT1G35995 transposable element gene -0.66 0.3 -0.29
34 AT1G80420 BRCT domain-containing DNA repair protein ATXRCC1 -0.66 0.3 -0.31
35 AT2G40680 transposable element gene 0.66 0.33 -0.3
36 AT3G44210 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43870.1); Has 15 Blast hits
to 15 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.66 0.31 -0.31
37 AT3G25260 Major facilitator superfamily protein 0.66 0.3 -0.32
38 AT2G18190 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.66 0.29 -0.32
39 AT3G54510 Early-responsive to dehydration stress protein (ERD4) 0.66 0.31 -0.31
40 AT3G42220 transposable element gene 0.66 0.32 -0.3
41 AT3G58770 unknown protein; Has 38 Blast hits to 36 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2;
Plants - 32; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.66 0.31 -0.32
42 AT2G36670 Eukaryotic aspartyl protease family protein 0.66 0.31 -0.31
43 AT5G22420 fatty acid reductase 7 fatty acid reductase 7 -0.65 0.32 -0.33
44 AT3G16060 ATP binding microtubule motor family protein 0.65 0.31 -0.33
45 AT5G09370 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.65 0.33 -0.33
46 AT2G30090 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.65 0.31 -0.31
47 AT2G04000 transposable element gene -0.64 0.32 -0.32
48 AT1G43680 BEST Arabidopsis thaliana protein match is: nucleic acid
binding;zinc ion binding (TAIR:AT5G36228.1); Has 59 Blast
hits to 57 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 59; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.3
49 AT3G08700 ubiquitin-conjugating enzyme 12 ubiquitin-conjugating enzyme 12 0.64 0.32 -0.29
50 AT5G48270 Plant protein of unknown function (DUF868) 0.64 0.31 -0.32
51 AT3G24650 AP2/B3-like transcriptional factor family protein ABA INSENSITIVE 3, ABSCISIC ACID
INSENSITIVE 3, SUGAR INSENSITIVE
10		 0.64 0.29 -0.33
52 AT5G50750 reversibly glycosylated polypeptide 4 reversibly glycosylated
polypeptide 4		 -0.64 0.32 -0.3
53 AT3G10580 Homeodomain-like superfamily protein 0.64 0.34 -0.33
54 AT2G23800 geranylgeranyl pyrophosphate synthase 2 geranylgeranyl pyrophosphate
synthase 2, GERANYLGERANYL
PYROPHOSPHATE SYNTHASE 5		 -0.64 0.31 -0.31
55 AT2G27395 pseudogene of cysteine protease-related 0.64 0.35 -0.32
56 AT5G14620 domains rearranged methyltransferase 2 DMT7, domains rearranged
methyltransferase 2		 0.64 0.33 -0.31
57 AT5G44070 phytochelatin synthase 1 (PCS1) ARA8, ARABIDOPSIS THALIANA
PHYTOCHELATIN SYNTHASE 1, CADMIUM
SENSITIVE 1, PHYTOCHELATIN
SYNTHASE 1		 -0.64 0.31 -0.31
58 AT4G14670 casein lytic proteinase B2 casein lytic proteinase B2 0.63 0.33 -0.32
59 AT2G24000 serine carboxypeptidase-like 22 serine carboxypeptidase-like 22 -0.63 0.31 -0.33
60 AT1G14940 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.63 0.31 -0.31
61 AT1G27990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G52420.1); Has 86 Blast hits
to 86 proteins in 15 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 0.63 0.32 -0.32
62 AT1G74190 receptor like protein 15 receptor like protein 15, receptor
like protein 15		 0.63 0.32 -0.32
63 AT1G49100 Leucine-rich repeat protein kinase family protein -0.63 0.3 -0.32
64 AT3G49830 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.63 0.31 -0.31
65 AT4G34320 Protein of unknown function (DUF677) 0.63 0.3 -0.34
66 AT2G10610 transposable element gene 0.63 0.29 -0.34
67 AT1G28270 ralf-like 4 ralf-like 4 0.63 0.33 -0.3
68 AT1G63560 Receptor-like protein kinase-related family protein 0.62 0.3 -0.31
69 AT3G42100 transposable element gene 0.62 0.33 -0.31
70 AT4G08430 Ulp1 protease family protein -0.62 0.33 -0.33
71 AT4G33440 Pectin lyase-like superfamily protein 0.62 0.32 -0.33
72 AT3G29430 Terpenoid synthases superfamily protein -0.62 0.31 -0.31
73 AT5G44530 Subtilase family protein 0.62 0.32 -0.31
74 AT5G51480 SKU5 similar 2 SKU5 similar 2 -0.62 0.32 -0.33
75 AT5G17720 alpha/beta-Hydrolases superfamily protein -0.62 0.32 -0.32
76 AT3G28260 unknown protein; Has 0 Blast hits to 0 proteins in 0
species (source: NCBI BLink).		 0.62 0.3 -0.33
77 AT4G30480 Tetratricopeptide repeat (TPR)-like superfamily protein AtTPR1, tetratricopeptide repeat 1 -0.62 0.31 -0.35
78 AT5G14930 senescence-associated gene 101 senescence-associated gene 101 -0.62 0.32 -0.32
79 AT3G13772 transmembrane nine 7 AtTMN7, transmembrane nine 7 0.62 0.28 -0.31
80 AT3G49820 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65925.1); Has 23 Blast hits
to 23 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.33 -0.33
81 AT1G23260 MMS ZWEI homologue 1 MMS ZWEI homologue 1, UBIQUITIN E2
VARIANT 1A		 -0.62 0.31 -0.32
82 AT2G30650 ATP-dependent caseinolytic (Clp) protease/crotonase family
protein		 -0.62 0.34 -0.3
83 AT1G56610 Protein with RNI-like/FBD-like domains -0.61 0.33 -0.3
84 AT3G24680 transposable element gene 0.61 0.33 -0.3
85 AT2G21490 dehydrin LEA dehydrin LEA 0.61 0.33 -0.31
86 AT5G35160 Endomembrane protein 70 protein family 0.61 0.31 -0.32
87 AT4G04970 glucan synthase-like 1 GLUCAN SYNTHASE LIKE 1, GLUCAN
SYNTHASE LIKE-1, GSL01, glucan
synthase-like 1		 0.61 0.31 -0.32
88 AT4G19740 Glycosyl hydrolase superfamily protein 0.61 0.32 -0.32
89 AT4G07660 transposable element gene -0.61 0.32 -0.34
90 AT2G01280 Cyclin/Brf1-like TBP-binding protein maternal effect embryo arrest 65 0.61 0.3 -0.3
91 AT5G37610 Eukaryotic porin family protein 0.61 0.31 -0.32
92 AT2G18550 homeobox protein 21 homeobox protein 21, homeobox-2,
homeobox protein 21		 0.61 0.28 -0.34
93 AT2G37430 C2H2 and C2HC zinc fingers superfamily protein -0.61 0.3 -0.32
94 AT5G62910 RING/U-box superfamily protein -0.6 0.29 -0.32
95 AT2G41420 proline-rich family protein WINDHOSE 2 -0.6 0.32 -0.32
96 AT2G26950 myb domain protein 104 myb domain protein 104, myb domain
protein 104		 -0.6 0.31 -0.32
97 AT4G33370 DEA(D/H)-box RNA helicase family protein -0.6 0.3 -0.32
98 AT2G01700 transposable element gene -0.6 0.31 -0.31
99 AT2G22950 Cation transporter/ E1-E2 ATPase family protein auto-regulated Ca2+-ATPase 7 -0.6 0.32 -0.31
100 AT5G48750 Cytochrome b561/ferric reductase transmembrane with DOMON
related domain		 -0.59 0.3 -0.31
101 AT3G21470 Pentatricopeptide repeat (PPR-like) superfamily protein -0.59 0.32 -0.31
102 AT4G23090 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.59 0.31 -0.32
103 AT2G41100 Calcium-binding EF hand family protein ARABIDOPSIS THALIANA CALMODULIN
LIKE 4, TOUCH 3		 -0.59 0.31 -0.32
104 AT2G26970 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.59 0.34 -0.31
105 AT5G61360 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G07730.1); Has 20 Blast hits
to 20 proteins in 7 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 -0.58 0.32 -0.3
106 AT4G24240 WRKY DNA-binding protein 7 ATWRKY7, WRKY DNA-binding protein
7		 -0.58 0.33 -0.31
107 AT1G35210 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 14 plant structures; EXPRESSED
DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s:
Protein of unknown function DUF740 (InterPro:IPR008004);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G22470.1); Has 83 Blast hits to 83 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 81; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 -0.58 0.34 -0.32
108 AT1G48210 Protein kinase superfamily protein -0.58 0.32 -0.31
109 AT1G72540 Protein kinase superfamily protein -0.58 0.31 -0.31
110 AT5G52340 exocyst subunit exo70 family protein A2 exocyst subunit exo70 family
protein A2, exocyst subunit exo70
family protein A2		 -0.57 0.31 -0.32
111 AT4G39610 Protein of unknown function, DUF617 -0.57 0.32 -0.32
112 AT2G01780 Curculin-like (mannose-binding) lectin family protein -0.57 0.31 -0.3
113 AT2G22630 AGAMOUS-like 17 AGAMOUS-like 17 -0.57 0.31 -0.33
114 AT3G12910 NAC (No Apical Meristem) domain transcriptional regulator
superfamily protein		 -0.57 0.32 -0.31
115 AT5G59450 GRAS family transcription factor -0.57 0.33 -0.34
116 AT3G18170 Glycosyltransferase family 61 protein -0.57 0.28 -0.31
117 AT4G17486 PPPDE putative thiol peptidase family protein -0.56 0.31 -0.34
118 AT5G14300 prohibitin 5 prohibitin 5, prohibitin 5 -0.56 0.3 -0.31
119 AT1G23220 Dynein light chain type 1 family protein -0.56 0.31 -0.31
120 AT4G25610 C2H2-like zinc finger protein -0.56 0.33 -0.3
121 AT4G01740 Cysteine/Histidine-rich C1 domain family protein -0.56 0.33 -0.33
122 AT5G60800 Heavy metal transport/detoxification superfamily protein -0.56 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
123 C0094 Galactosamine D-Galactosamine - - 0.71 0.42 -0.45
124 C0234 Sinapoyl glucose 1-O-Sinapoyl-β-D-glucose 1-O-Sinapoyl-β-D-glucose sinapate ester biosynthesis 0.71 0.46 -0.45 C0234
125 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.66 0.43 -0.44 C0186