AT1G08130 : DNA ligase 1
Query Information
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AGICode AT1G08130
Description DNA ligase 1
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G08130 DNA ligase 1 DNA ligase 1, DNA ligase 1 1 0.32 -0.32
2 AT5G48360 Actin-binding FH2 (formin homology 2) family protein 0.71 0.29 -0.31
3 AT4G02680 ETO1-like 1 ETO1-like 1 0.7 0.31 -0.33
4 AT1G65520 delta(3), delta(2)-enoyl CoA isomerase 1 ARABIDOPSIS THALIANA DELTA(3),
DELTA(2)-ENOYL COA ISOMERASE 1,
ENOYL-COA HYDRATASE/ISOMERASE C,
delta(3), delta(2)-enoyl CoA
isomerase 1, PEC11		 -0.69 0.31 -0.33
5 AT1G09000 NPK1-related protein kinase 1 NPK1-related protein kinase 1, MAP
KINASE KINASE KINASE 1,
NPK1-related protein kinase 1		 0.68 0.34 -0.32
6 AT5G63000 Mitochondrial import inner membrane translocase subunit
Tim17/Tim22/Tim23 family protein		 -0.68 0.32 -0.31
7 AT4G02010 Protein kinase superfamily protein 0.68 0.34 -0.32
8 AT2G40070 BEST Arabidopsis thaliana protein match is: proline-rich
family protein (TAIR:AT3G09000.1); Has 35333 Blast hits to
34131 proteins in 2444 species: Archae - 798; Bacteria -
22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses -
0; Other Eukaryotes - 9610 (source: NCBI BLink).		 0.68 0.3 -0.32
9 AT1G64850 Calcium-binding EF hand family protein -0.68 0.29 -0.32
10 AT5G09830 BolA-like family protein -0.67 0.33 -0.33
11 AT4G39680 SAP domain-containing protein 0.67 0.3 -0.31
12 AT2G16440 Minichromosome maintenance (MCM2/3/5) family protein MINICHROMOSOME MAINTENANCE 4 0.67 0.31 -0.3
13 AT2G22840 growth-regulating factor 1 growth-regulating factor 1,
growth-regulating factor 1		 0.66 0.32 -0.31
14 AT4G14200 Pentatricopeptide repeat (PPR) superfamily protein 0.66 0.32 -0.3
15 AT3G44280 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.66 0.32 -0.31
16 AT3G15290 3-hydroxyacyl-CoA dehydrogenase family protein -0.66 0.31 -0.3
17 AT3G01330 DP-E2F-like protein 3 DP-E2F-like protein 3, E2FF,
E2F-LIKE 2		 0.66 0.32 -0.36
18 AT5G16780 SART-1 family DEFECTIVELY ORGANIZED TRIBUTARIES
2, MERISTEM-DEFECTIVE		 0.65 0.31 -0.3
19 AT1G77720 putative protein kinase 1 putative protein kinase 1 0.65 0.31 -0.33
20 AT1G27530 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating
enzyme/RWD-like (InterPro:IPR016135), Ubiquitin-fold
modifier-conjugating enzyme 1 (InterPro:IPR014806); Has 269
Blast hits to 269 proteins in 110 species: Archae - 0;
Bacteria - 0; Metazoa - 175; Fungi - 0; Plants - 42;
Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).		 -0.65 0.32 -0.32
21 AT4G25720 glutaminyl cyclase ARABIDOPSIS THALIANA GLUTAMINYL
CYCLASE, glutaminyl cyclase,
GLUTAMINYL CYCLOTRANSFERASE		 -0.65 0.31 -0.32
22 AT5G04740 ACT domain-containing protein ACT domain repeats 12 -0.63 0.33 -0.32
23 AT1G08480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED
IN: 27 plant structures; EXPRESSED DURING: 15 growth
stages; Has 39 Blast hits to 39 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants -
39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).		 succinate dehydrogenase 6 -0.63 0.32 -0.33
24 AT4G21610 lsd one like 2 lsd one like 2 -0.63 0.3 -0.31
25 AT5G62575 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 25 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G47833.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 succinate dehydrogenase 7,
succinate dehydrogenase 7B		 -0.63 0.32 -0.36
26 AT5G47400 unknown protein; FUNCTIONS IN: molecular_function unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 0.63 0.31 -0.34
27 AT4G31880 LOCATED IN: cytosol, chloroplast; EXPRESSED IN: 24 plant
structures; EXPRESSED DURING: 14 growth stages; BEST
Arabidopsis thaliana protein match is: Tudor/PWWP/MBT
superfamily protein (TAIR:AT1G15940.1); Has 137162 Blast
hits to 70781 proteins in 2973 species: Archae - 289;
Bacteria - 24182; Metazoa - 56725; Fungi - 20130; Plants -
6559; Viruses - 758; Other Eukaryotes - 28519 (source: NCBI
BLink).		 0.63 0.31 -0.33
28 AT3G61690 nucleotidyltransferases 0.62 0.32 -0.32
29 AT4G11340 Disease resistance protein (TIR-NBS-LRR class) family 0.62 0.31 -0.32
30 AT5G48600 structural maintenance of chromosome 3 ARABIDOPSIS THALIANA CHROMOSOME
ASSOCIATED PROTEIN-C, structural
maintenance of chromosome 3,
ARABIDOPSIS THALIANA STRUCTURAL
MAINTENANCE OF CHROMOSOME 4,
structural maintenance of
chromosome 3		 0.61 0.32 -0.3
31 AT5G39730 AIG2-like (avirulence induced gene) family protein -0.61 0.31 -0.32
32 AT4G15890 binding 0.61 0.32 -0.29
33 AT3G44050 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.61 0.31 -0.31
34 AT1G62020 Coatomer, alpha subunit 0.6 0.31 -0.29
35 AT1G80020 transposable element gene 0.6 0.33 -0.31
36 AT1G64330 myosin heavy chain-related 0.59 0.3 -0.34
37 AT1G48320 Thioesterase superfamily protein -0.59 0.32 -0.31
38 AT1G11250 syntaxin of plants 125 ATSYP125, syntaxin of plants 125 -0.59 0.32 -0.33
39 AT1G71830 somatic embryogenesis receptor-like kinase 1 SOMATIC EMBRYOGENESIS
RECEPTOR-LIKE KINASE 1, somatic
embryogenesis receptor-like kinase
1		 0.59 0.3 -0.33
40 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 -0.59 0.32 -0.31
41 AT3G15090 GroES-like zinc-binding alcohol dehydrogenase family
protein		 -0.59 0.33 -0.3
42 AT2G44525 Protein of unknown function (DUF498/DUF598) -0.58 0.3 -0.32
43 AT2G39100 RING/U-box superfamily protein -0.58 0.32 -0.34
44 AT4G14170 Pentatricopeptide repeat (PPR) superfamily protein 0.58 0.32 -0.33
45 AT3G52300 ATP synthase D chain, mitochondrial ATP synthase D chain,
mitochondrial		 -0.58 0.32 -0.32
46 AT5G03770 KDO transferase A AtKdtA, KDO transferase A -0.58 0.31 -0.31
47 AT3G17740 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Protein of unknown function DUF1740
(InterPro:IPR013633); BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G17712.1); Has 409 Blast
hits to 335 proteins in 133 species: Archae - 1; Bacteria -
0; Metazoa - 140; Fungi - 188; Plants - 42; Viruses - 0;
Other Eukaryotes - 38 (source: NCBI BLink).		 0.58 0.33 -0.32
48 AT4G20270 Leucine-rich receptor-like protein kinase family protein BARELY ANY MERISTEM 3 0.57 0.32 -0.31
49 AT5G05760 syntaxin of plants 31 ATSED5, ATSYP31, T-SNARE SED 5,
syntaxin of plants 31		 -0.57 0.31 -0.32
50 AT5G10870 chorismate mutase 2 chorismate mutase 2, chorismate
mutase 2		 -0.56 0.31 -0.32
51 AT3G13845 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; Has 22 Blast hits to 22
proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.56 0.32 -0.31
52 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.56 0.31 -0.32
53 AT5G55960 unknown protein; CONTAINS InterPro DOMAIN/s:
Uncharacterised protein family UPF0118
(InterPro:IPR002549); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.55 0.32 -0.33
54 AT2G36980 Tetratricopeptide repeat (TPR)-like superfamily protein 0.55 0.31 -0.31
55 AT1G75640 Leucine-rich receptor-like protein kinase family protein 0.55 0.31 -0.32
56 AT1G70130 Concanavalin A-like lectin protein kinase family protein -0.55 0.32 -0.3
57 AT1G04150 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 0.55 0.33 -0.29
58 AT1G76880 Duplicated homeodomain-like superfamily protein 0.55 0.32 -0.29
59 AT4G16710 glycosyltransferase family protein 28 -0.55 0.32 -0.32
60 AT4G18230 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s:
Oligosaccharide biosynthesis protein Alg14 like
(InterPro:IPR013969); Has 640 Blast hits to 640 proteins in
277 species: Archae - 4; Bacteria - 281; Metazoa - 94;
Fungi - 127; Plants - 57; Viruses - 0; Other Eukaryotes -
77 (source: NCBI BLink).		 -0.55 0.3 -0.32
61 AT3G61540 alpha/beta-Hydrolases superfamily protein -0.54 0.32 -0.32
62 AT1G75400 RING/U-box superfamily protein -0.54 0.3 -0.3
63 AT3G62710 Glycosyl hydrolase family protein -0.54 0.33 -0.3
64 AT5G11910 alpha/beta-Hydrolases superfamily protein -0.54 0.32 -0.3
65 AT1G65380 Leucine-rich repeat (LRR) family protein Receptor Like Protein 10, clavata
2		 0.53 0.32 -0.32
66 AT1G22140 unknown protein; Has 40 Blast hits to 40 proteins in 14
species: Archae - 0; Bacteria - 0; Metazoa - 9; Fungi - 0;
Plants - 28; Viruses - 0; Other Eukaryotes - 3 (source:
NCBI BLink).		 -0.53 0.31 -0.3
67 AT1G51650 ATP synthase epsilon chain, mitochondrial -0.53 0.3 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
68 C0104 Glutathione - Glutathione glucosinolate biosynthesis from tryptophan,
glutathione redox reactions I,
glutathione degradation,
gamma-glutamyl cycle (plant pathway),
indole glucosinolate breakdown (active in intact plant cell),
selenate reduction,
glutathione redox reactions II,
glucosinolate biosynthesis from trihomomethionine,
ascorbate glutathione cycle,
glucosinolate biosynthesis from pentahomomethionine,
camalexin biosynthesis,
glucosinolate biosynthesis from homomethionine,
glucosinolate biosynthesis from phenylalanine,
methylglyoxal degradation I,
sulfate reduction II (assimilatory),
glucosinolate biosynthesis from dihomomethionine,
indole glucosinolate breakdown (insect chewing induced),
glutathione biosynthesis,
formaldehyde oxidation II (glutathione-dependent),
glutathione-mediated detoxification II,
glucosinolate biosynthesis from tetrahomomethionine,
glucosinolate biosynthesis from hexahomomethionine,
gamma-glutamyl cycle 		-0.54 0.33 -0.3 C0104