AT1G65930 : cytosolic NADP+-dependent isocitrate dehydrogenase.....
Query Information
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AGICode AT1G65930
Description cytosolic NADP+-dependent isocitrate dehydrogenase
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 1 0.31 -0.33
2 AT1G14210 Ribonuclease T2 family protein 0.74 0.33 -0.31
3 AT1G60960 iron regulated transporter 3 IRON REGULATED TRANSPORTER 3, iron
regulated transporter 3		 0.74 0.32 -0.3
4 AT1G04410 Lactate/malate dehydrogenase family protein cytosolic-NAD-dependent malate
dehydrogenase 1		 0.74 0.31 -0.31
5 AT5G53130 cyclic nucleotide gated channel 1 CYCLIC NUCLEOTIDE-GATED CHANNEL 1,
cyclic nucleotide gated channel 1		 -0.72 0.34 -0.31
6 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.7 0.32 -0.31
7 AT1G09780 Phosphoglycerate mutase,
2,3-bisphosphoglycerate-independent		 2,3-biphosphoglycerate-independent
phosphoglycerate mutase 1		 0.69 0.34 -0.31
8 AT3G48990 AMP-dependent synthetase and ligase family protein 0.68 0.34 -0.31
9 AT1G77840 Translation initiation factor IF2/IF5 0.68 0.31 -0.34
10 AT4G20840 FAD-binding Berberine family protein 0.68 0.33 -0.29
11 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.68 0.29 -0.31
12 AT3G16770 ethylene-responsive element binding protein ethylene-responsive element
binding protein,
ethylene-responsive element
binding protein, ETHYLENE RESPONSE
FACTOR 72, RELATED TO AP2 3		 0.68 0.34 -0.3
13 AT5G04520 Protein of unknown function DUF455 0.67 0.32 -0.34
14 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.67 0.32 -0.3
15 AT5G48370 Thioesterase/thiol ester dehydrase-isomerase superfamily
protein		 -0.67 0.32 -0.32
16 AT3G53110 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 LOW EXPRESSION OF OSMOTICALLY
RESPONSIVE GENES 4		 0.66 0.31 -0.3
17 AT3G14770 Nodulin MtN3 family protein AtSWEET2, SWEET2 0.66 0.31 -0.29
18 AT4G05390 root FNR 1 root FNR 1, root FNR 1 0.66 0.31 -0.33
19 AT1G55680 Transducin/WD40 repeat-like superfamily protein -0.65 0.31 -0.33
20 AT4G34100 RING/U-box superfamily protein -0.64 0.33 -0.32
21 AT1G76040 calcium-dependent protein kinase 29 calcium-dependent protein kinase
29		 -0.64 0.31 -0.33
22 AT4G15680 Thioredoxin superfamily protein 0.64 0.31 -0.31
23 AT1G62430 CDP-diacylglycerol synthase 1 CDP-diacylglycerol synthase 1,
CDP-diacylglycerol synthase 1		 -0.64 0.3 -0.29
24 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 0.64 0.3 -0.3
25 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.64 0.33 -0.31
26 AT5G27930 Protein phosphatase 2C family protein -0.63 0.33 -0.31
27 AT1G16560 Per1-like family protein 0.63 0.32 -0.31
28 AT1G74000 strictosidine synthase 3 strictosidine synthase 3 0.63 0.31 -0.31
29 AT5G66380 folate transporter 1 folate transporter 1, folate
transporter 1		 0.63 0.31 -0.32
30 AT3G02710 ARM repeat superfamily protein 0.62 0.34 -0.32
31 AT5G59150 RAB GTPase homolog A2D ARABIDOPSIS RAB GTPASE HOMOLOG
A2D, RAB GTPase homolog A2D, RAB
GTPase homolog A2D		 0.62 0.34 -0.34
32 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.62 0.32 -0.32
33 AT5G20930 Protein kinase superfamily protein TOUSLED -0.62 0.3 -0.31
34 AT5G08230 Tudor/PWWP/MBT domain-containing protein -0.62 0.3 -0.3
35 AT1G78090 trehalose-6-phosphate phosphatase Arabidopsis thaliana
trehalose-6-phosphate phosphatase
B, trehalose-6-phosphate
phosphatase B		 0.62 0.32 -0.3
36 AT3G15610 Transducin/WD40 repeat-like superfamily protein 0.61 0.32 -0.31
37 AT5G56870 beta-galactosidase 4 beta-galactosidase 4 0.61 0.33 -0.33
38 AT1G50590 RmlC-like cupins superfamily protein -0.61 0.33 -0.34
39 AT3G02130 receptor-like protein kinase 2 clv3 peptide insensitive 1,
receptor-like protein kinase 2,
TOADSTOOL 2		 -0.61 0.33 -0.3
40 AT1G68880 basic leucine-zipper 8 basic leucine-zipper 8, basic
leucine-zipper 8		 0.61 0.32 -0.31
41 AT1G04010 phospholipid sterol acyl transferase 1 ATPSAT1, phospholipid sterol acyl
transferase 1		 -0.61 0.29 -0.33
42 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.61 0.3 -0.32
43 AT3G03440 ARM repeat superfamily protein -0.61 0.32 -0.29
44 AT5G39850 Ribosomal protein S4 0.61 0.29 -0.31
45 AT1G60470 galactinol synthase 4 galactinol synthase 4, galactinol
synthase 4		 -0.61 0.32 -0.31
46 AT2G23610 methyl esterase 3 ARABIDOPSIS THALIANA METHYL
ESTERASE 3, methyl esterase 3		 0.6 0.33 -0.32
47 AT1G36060 Integrase-type DNA-binding superfamily protein 0.6 0.33 -0.33
48 AT4G21400 cysteine-rich RLK (RECEPTOR-like protein kinase) 28 cysteine-rich RLK (RECEPTOR-like
protein kinase) 28		 0.6 0.32 -0.34
49 AT3G02910 AIG2-like (avirulence induced gene) family protein 0.6 0.33 -0.31
50 AT1G60490 vacuolar protein sorting 34 ATVPS34, PHOSPATIDYLINOSITOL
3-KINASE, vacuolar protein sorting
34		 -0.6 0.33 -0.32
51 AT2G29740 UDP-glucosyl transferase 71C2 UDP-glucosyl transferase 71C2 0.6 0.32 -0.31
52 ATMG01370 hypothetical protein ORF111D 0.59 0.31 -0.33
53 AT5G60980 Nuclear transport factor 2 (NTF2) family protein with RNA
binding (RRM-RBD-RNP motifs) domain		 0.59 0.32 -0.31
54 AT5G04310 Pectin lyase-like superfamily protein 0.59 0.32 -0.3
55 AT2G43680 IQ-domain 14 IQ-domain 14 -0.59 0.32 -0.32
56 AT1G53950 Ubiquitin-like superfamily protein -0.59 0.3 -0.32
57 AT2G26980 CBL-interacting protein kinase 3 CBL-interacting protein kinase 3,
SNF1-RELATED PROTEIN KINASE 3.17		 0.59 0.31 -0.29
58 AT4G02380 senescence-associated gene 21 Arabidopsis thaliana late
embryogenensis abundant like 5,
senescence-associated gene 21		 0.58 0.32 -0.29
59 AT1G79260 CONTAINS InterPro DOMAIN/s: Domain of unknown function
DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.58 0.29 -0.32
60 AT5G08360 Protein of unknown function (DUF789) 0.58 0.3 -0.31
61 AT2G28200 C2H2-type zinc finger family protein 0.58 0.31 -0.32
62 AT2G40840 disproportionating enzyme 2 disproportionating enzyme 2 -0.58 0.31 -0.32
63 AT1G32900 UDP-Glycosyltransferase superfamily protein granule bound starch synthase 1 -0.58 0.3 -0.31
64 AT1G67865 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67860.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.34 -0.32
65 AT5G24620 Pathogenesis-related thaumatin superfamily protein -0.56 0.33 -0.31
66 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.56 0.29 -0.29
67 AT5G20390 Glycosyl hydrolase superfamily protein -0.55 0.32 -0.3
68 AT1G58220 Homeodomain-like superfamily protein -0.55 0.32 -0.31
69 AT5G58400 Peroxidase superfamily protein -0.55 0.32 -0.34
70 AT5G48060 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.54 0.3 -0.32
71 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.33 -0.3
72 AT5G07640 RING/U-box superfamily protein -0.54 0.31 -0.29
73 AT5G43150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.54 0.33 -0.34
74 AT3G29590 HXXXD-type acyl-transferase family protein AT5MAT -0.54 0.33 -0.34
75 AT4G10510 Subtilase family protein -0.53 0.32 -0.32
76 AT2G42640 Mitogen activated protein kinase kinase kinase-related -0.53 0.31 -0.33
77 AT3G24900 receptor like protein 39 receptor like protein 39, receptor
like protein 39		 -0.53 0.32 -0.31
78 AT5G44990 Glutathione S-transferase family protein -0.53 0.3 -0.3
79 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 -0.53 0.34 -0.31
80 AT5G20350 Ankyrin repeat family protein with DHHC zinc finger domain TIP GROWTH DEFECTIVE 1 -0.53 0.31 -0.33
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
81 C0092 Fumaric acid - Fumarate citrulline-nitric oxide cycle,
succinate + a ubiquinone -> a ubiquinol + fumarate,
superpathway of glyoxylate cycle and fatty acid degradation,
tyrosine degradation I,
aerobic respiration (alternative oxidase pathway),
inosine-5'-phosphate biosynthesis II,
arginine biosynthesis I,
TCA cycle variation V (plant),
TCA cycle variation III (eukaryotic),
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
purine nucleotides de novo biosynthesis II,
arginine biosynthesis II (acetyl cycle),
urea cycle,
aerobic respiration (cytochrome c) 		-0.63 0.3 -0.29 C0092
82 C0141 Malic acid D,L-Malic acid (RS)-Malate sinapate ester biosynthesis,
superpathway of glyoxylate cycle and fatty acid degradation,
TCA cycle variation III (eukaryotic),
glyoxylate cycle,
aspartate degradation II,
TCA cycle variation V (plant),
gluconeogenesis I,
glycolate and glyoxylate degradation II 		-0.56 0.3 -0.32 C0141
83 C0098 Glucose D-Glucose alpha-D-glucose; beta-D-glucose trehalose degradation II (trehalase),
indole glucosinolate breakdown (active in intact plant cell),
coumarin biosynthesis (via 2-coumarate),
glucosinolate biosynthesis from tryptophan,
sinapate ester biosynthesis,
GDP-glucose biosynthesis,
coniferin metabolism,
melibiose degradation,
indole glucosinolate breakdown (insect chewing induced) 		-0.56 0.31 -0.31 C0098