AT1G59520 : CW7
Query Information
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AGICode AT1G59520
Description CW7
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G59520 CW7 CW7 1 0.32 -0.32
2 AT3G52610 unknown protein; Has 68 Blast hits to 67 proteins in 21
species: Archae - 0; Bacteria - 11; Metazoa - 0; Fungi - 0;
Plants - 55; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.74 0.33 -0.33
3 AT1G05030 Major facilitator superfamily protein 0.73 0.32 -0.31
4 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.72 0.3 -0.31
5 AT1G28320 protease-related DEG15 0.71 0.32 -0.31
6 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 0.7 0.33 -0.33
7 AT2G28360 SIT4 phosphatase-associated family protein -0.7 0.31 -0.29
8 AT5G14520 pescadillo-related -0.7 0.31 -0.32
9 AT3G59090 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana
protein match is: tobamovirus multiplication 1
(TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in
29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source:
NCBI BLink).		 0.68 0.34 -0.33
10 AT4G16770 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.68 0.32 -0.31
11 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 0.68 0.31 -0.33
12 AT4G29220 phosphofructokinase 1 phosphofructokinase 1 0.68 0.3 -0.31
13 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 -0.67 0.3 -0.31
14 AT1G15480 Tetratricopeptide repeat (TPR)-like superfamily protein -0.66 0.3 -0.33
15 AT4G28440 Nucleic acid-binding, OB-fold-like protein -0.66 0.31 -0.31
16 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 0.66 0.3 -0.3
17 AT3G21540 transducin family protein / WD-40 repeat family protein -0.66 0.31 -0.32
18 AT2G04230 FBD, F-box and Leucine Rich Repeat domains containing
protein		 0.65 0.29 -0.3
19 AT5G60600 4-hydroxy-3-methylbut-2-enyl diphosphate synthase CHLOROPLAST BIOGENESIS 4,
CONSTITUTIVE SUBTILISIN 3, GCPE,
4-hydroxy-3-methylbut-2-enyl
diphosphate synthase, ISPG		 0.65 0.31 -0.32
20 AT3G18810 Protein kinase superfamily protein proline-rich extensin-like
receptor kinase 6, proline-rich
extensin-like receptor kinase 6		 0.65 0.31 -0.34
21 AT1G02960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits
to 82 proteins in 37 species: Archae - 0; Bacteria - 2;
Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other
Eukaryotes - 25 (source: NCBI BLink).		 0.64 0.34 -0.32
22 AT4G36960 RNA-binding (RRM/RBD/RNP motifs) family protein 0.64 0.31 -0.31
23 AT5G42420 Nucleotide-sugar transporter family protein -0.63 0.31 -0.32
24 AT1G53670 methionine sulfoxide reductase B 1 ATMSRB1, methionine sulfoxide
reductase B 1		 0.63 0.33 -0.31
25 AT4G27850 Glycine-rich protein family 0.63 0.31 -0.32
26 AT1G22270 Trm112p-like protein -0.63 0.31 -0.29
27 AT1G31010 organellar single-stranded DNA binding protein 4 organellar single-stranded DNA
binding protein 4		 -0.62 0.3 -0.32
28 AT1G52550 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G15780.1); Has 53 Blast
hits to 51 proteins in 18 species: Archae - 0; Bacteria -
8; Metazoa - 4; Fungi - 0; Plants - 23; Viruses - 8; Other
Eukaryotes - 10 (source: NCBI BLink).		 0.62 0.31 -0.3
29 AT4G37090 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.62 0.34 -0.29
30 AT5G16150 plastidic GLC translocator GLUCOSE TRANSPORTER 1, plastidic
GLC translocator		 0.62 0.31 -0.3
31 AT3G23200 Uncharacterised protein family (UPF0497) 0.62 0.31 -0.34
32 AT1G73750 Uncharacterised conserved protein UCP031088, alpha/beta
hydrolase		 0.61 0.34 -0.32
33 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.61 0.32 -0.31
34 AT3G49060 U-box domain-containing protein kinase family protein 0.61 0.32 -0.32
35 AT3G59300 Pentatricopeptide repeat (PPR) superfamily protein 0.61 0.32 -0.3
36 AT1G54380 spliceosome protein-related -0.61 0.3 -0.31
37 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.61 0.32 -0.34
38 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein -0.61 0.32 -0.32
39 AT1G59820 aminophospholipid ATPase 3 aminophospholipid ATPase 3 0.61 0.32 -0.3
40 AT5G41150 Restriction endonuclease, type II-like superfamily protein ATRAD1, RAD1, ULTRAVIOLET
HYPERSENSITIVE 1		 0.61 0.31 -0.32
41 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.61 0.3 -0.33
42 AT4G33160 F-box family protein -0.6 0.31 -0.31
43 AT2G29995 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 15 plant structures;
EXPRESSED DURING: 6 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT1G07175.1); Has 14 Blast hits to 14 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 14; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.31 -0.31
44 AT1G07190 BEST Arabidopsis thaliana protein match is: lon protease 1
(TAIR:AT5G26860.1); Has 106 Blast hits to 106 proteins in
47 species: Archae - 0; Bacteria - 34; Metazoa - 0; Fungi -
11; Plants - 56; Viruses - 0; Other Eukaryotes - 5 (source:
NCBI BLink).		 0.6 0.3 -0.31
45 AT3G54770 RNA-binding (RRM/RBD/RNP motifs) family protein -0.6 0.3 -0.31
46 AT5G56160 Sec14p-like phosphatidylinositol transfer family protein 0.6 0.32 -0.32
47 AT5G40200 DegP protease 9 DegP protease 9 -0.6 0.32 -0.3
48 AT5G40500 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.6 0.32 -0.32
49 AT5G59800 methyl-CPG-binding domain 7 ARABIDOPSIS THALIANA
METHYL-CPG-BINDING DOMAIN 7,
methyl-CPG-binding domain 7		 0.6 0.32 -0.3
50 AT4G22840 Sodium Bile acid symporter family 0.6 0.32 -0.32
51 AT3G02940 myb domain protein 107 myb domain protein 107, myb domain
protein 107		 -0.6 0.3 -0.33
52 AT4G16870 transposable element gene 0.6 0.32 -0.3
53 AT1G74840 Homeodomain-like superfamily protein -0.6 0.31 -0.31
54 AT5G18070 phosphoglucosamine mutase-related DNA-DAMAGE-REPAIR/TOLERATION 101 -0.6 0.32 -0.32
55 AT3G01180 starch synthase 2 starch synthase 2, starch synthase
2		 0.6 0.31 -0.31
56 AT4G39260 cold, circadian rhythm, and RNA binding 1 GLYCINE-RICH PROTEIN 8, cold,
circadian rhythm, and RNA binding
1, glycine-rich RNA-binding
protein 8, GRP8		 -0.6 0.29 -0.31
57 AT5G53510 oligopeptide transporter 9 oligopeptide transporter 9,
oligopeptide transporter 9		 0.59 0.33 -0.32
58 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 0.59 0.31 -0.32
59 AT5G15750 Alpha-L RNA-binding motif/Ribosomal protein S4 family
protein		 -0.59 0.32 -0.32
60 AT1G15490 alpha/beta-Hydrolases superfamily protein 0.59 0.31 -0.3
61 AT5G16180 ortholog of maize chloroplast splicing factor CRS1 ARABIDOPSIS ORTHOLOG OF MAIZE
CHLOROPLAST SPLICING FACTOR CRS1,
ortholog of maize chloroplast
splicing factor CRS1		 0.58 0.29 -0.28
62 AT2G21660 cold, circadian rhythm, and rna binding 2 GLYCINE RICH PROTEIN 7, cold,
circadian rhythm, and rna binding
2, GLYCINE-RICH RNA-BINDING
PROTEIN 7, GLYCINE-RICH
RNA-BINDING PROTEIN 7		 -0.58 0.31 -0.31
63 AT3G30340 nodulin MtN21 /EamA-like transporter family protein 0.58 0.31 -0.3
64 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.58 0.31 -0.3
65 AT2G32600 hydroxyproline-rich glycoprotein family protein -0.58 0.3 -0.32
66 AT3G23090 TPX2 (targeting protein for Xklp2) protein family -0.58 0.31 -0.33
67 AT3G28910 myb domain protein 30 ATMYB30, myb domain protein 30 -0.58 0.32 -0.32
68 AT1G61500 S-locus lectin protein kinase family protein 0.57 0.32 -0.34
69 AT5G18250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 13 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT3G04040.1); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.57 0.3 -0.32
70 AT1G65540 LETM1-like protein 0.57 0.32 -0.33
71 AT4G16566 histidine triad nucleotide-binding 4 histidine triad nucleotide-binding
4		 0.57 0.34 -0.32
72 AT1G14740 Protein of unknown function (DUF1423) -0.56 0.31 -0.32
73 AT5G04280 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 AtRZ-1c, RZ-1c -0.56 0.32 -0.32
74 AT5G20950 Glycosyl hydrolase family protein -0.56 0.31 -0.32
75 AT1G19370 unknown protein; LOCATED IN: endoplasmic reticulum;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G75140.1); Has 45 Blast hits to 43
proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes -
1 (source: NCBI BLink).		 -0.56 0.32 -0.31
76 AT5G56240 BEST Arabidopsis thaliana protein match is: hapless 8
(TAIR:AT5G56250.1); Has 35333 Blast hits to 34131 proteins
in 2444 species: Archae - 798; Bacteria - 22429; Metazoa -
974; Fungi - 991; Plants - 531; Viruses - 0; Other
Eukaryotes - 9610 (source: NCBI BLink).		 -0.55 0.31 -0.31
77 AT5G06160 splicing factor-related ATROPOS -0.55 0.32 -0.34
78 AT2G27100 C2H2 zinc-finger protein SERRATE (SE) SERRATE -0.55 0.29 -0.31
79 AT1G78390 nine-cis-epoxycarotenoid dioxygenase 9 NINE-CIS-EPOXYCAROTENOID
DIOXYGENASE 9,
nine-cis-epoxycarotenoid
dioxygenase 9		 -0.55 0.3 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
80 C0149 Mevalonolactone D,L-Mevalonolactone - terpenoid biosynthesis 0.72 0.42 -0.43
81 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.68 0.44 -0.44 C0053