AT1G74870 : -
Query Information
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AGICode AT1G74870
Description RING/U-box superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G74870 RING/U-box superfamily protein 1 0.31 -0.3
2 AT4G00780 TRAF-like family protein -0.7 0.32 -0.3
3 AT2G07520 transposable element gene 0.7 0.33 -0.3
4 AT4G16050 Aminotransferase-like, plant mobile domain family protein 0.68 0.32 -0.31
5 AT1G67870 glycine-rich protein -0.67 0.29 -0.29
6 AT4G19670 RING/U-box superfamily protein -0.67 0.32 -0.3
7 AT1G17790 DNA-binding bromodomain-containing protein -0.67 0.32 -0.34
8 AT1G75860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G20100.1); Has 258 Blast hits
to 235 proteins in 58 species: Archae - 0; Bacteria - 4;
Metazoa - 59; Fungi - 16; Plants - 90; Viruses - 0; Other
Eukaryotes - 89 (source: NCBI BLink).		 0.66 0.33 -0.29
9 AT1G74700 tRNAse Z1 NUZ, tRNAse Z1 0.66 0.31 -0.31
10 AT5G49500 Signal recognition particle, SRP54 subunit protein -0.65 0.31 -0.31
11 AT5G24440 CTC-interacting domain 13 CTC-interacting domain 13 -0.65 0.32 -0.31
12 AT1G29710 Tetratricopeptide repeat (TPR)-like superfamily protein 0.65 0.32 -0.3
13 AT1G01990 unknown protein; Has 32 Blast hits to 32 proteins in 6
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.65 0.33 -0.34
14 AT1G23130 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 -0.65 0.31 -0.32
15 AT3G24490 Alcohol dehydrogenase transcription factor Myb/SANT-like
family protein		 0.64 0.31 -0.32
16 AT2G04740 ankyrin repeat family protein 0.64 0.31 -0.3
17 AT1G67860 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G67865.1); Has 13 Blast hits
to 13 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.33 -0.32
18 AT4G20250 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.63 0.32 -0.32
19 AT5G57140 purple acid phosphatase 28 PURPLE ACID PHOSPHATASE 28, purple
acid phosphatase 28		 -0.63 0.29 -0.31
20 AT5G28290 NIMA-related kinase 3 NIMA-related kinase 3,
NIMA-related kinase 3		 0.62 0.33 -0.31
21 AT1G76020 Thioredoxin superfamily protein -0.62 0.34 -0.3
22 AT4G15570 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 MAGATAMA 3 0.62 0.31 -0.32
23 AT5G35430 Tetratricopeptide repeat (TPR)-like superfamily protein 0.62 0.32 -0.31
24 AT2G40990 DHHC-type zinc finger family protein -0.61 0.33 -0.33
25 AT5G38750 asparaginyl-tRNA synthetase family 0.61 0.34 -0.31
26 AT5G26900 Transducin family protein / WD-40 repeat family protein AtCDC20.4, cell division cycle
20.4		 0.61 0.33 -0.31
27 AT2G07020 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.61 0.29 -0.3
28 AT1G43840 transposable element gene 0.61 0.31 -0.33
29 AT4G20420 Tapetum specific protein TAP35/TAP44 -0.61 0.31 -0.32
30 AT1G54230 Winged helix-turn-helix transcription repressor DNA-binding -0.61 0.31 -0.31
31 AT3G03970 ARM repeat superfamily protein 0.6 0.33 -0.32
32 AT2G35750 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 13 growth stages; Has 1 Blast hits to 1
proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.6 0.29 -0.33
33 AT2G35030 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.32 -0.31
34 AT2G15510 transposable element gene 0.6 0.34 -0.33
35 AT1G63500 Protein kinase protein with tetratricopeptide repeat domain 0.6 0.32 -0.31
36 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch
domain-containing protein		 -0.6 0.32 -0.31
37 AT2G47230 DOMAIN OF UNKNOWN FUNCTION 724 6 DOMAIN OF UNKNOWN FUNCTION 724 6,
DOMAIN OF UNKNOWN FUNCTION 724 6		 -0.59 0.37 -0.31
38 AT5G09280 Pectin lyase-like superfamily protein -0.59 0.29 -0.33
39 AT3G07610 Transcription factor jumonji (jmjC) domain-containing
protein		 increase in bonsai methylation 1 0.59 0.33 -0.33
40 AT5G59660 Leucine-rich repeat protein kinase family protein -0.58 0.31 -0.34
41 AT5G22730 F-box/RNI-like/FBD-like domains-containing protein 0.58 0.35 -0.31
42 AT5G36990 transposable element gene -0.57 0.32 -0.3
43 AT1G48760 delta-adaptin delta-adaptin, PROTEIN-AFFECTED
TRAFFICKING 4		 0.57 0.33 -0.3
44 AT3G22050 Domain of unknown function (DUF26) 0.57 0.31 -0.32
45 AT4G17990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits
to 131 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.33 -0.32
46 AT4G08160 glycosyl hydrolase family 10 protein / carbohydrate-binding
domain-containing protein		 -0.57 0.33 -0.33
47 AT5G43670 Sec23/Sec24 protein transport family protein 0.57 0.33 -0.32
48 AT5G01360 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 3 -0.57 0.31 -0.3
49 AT3G23650 protein kinase-related -0.57 0.31 -0.31
50 AT1G51670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G48180.1); Has 37 Blast hits
to 37 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.57 0.31 -0.33
51 AT4G15755 Calcium-dependent lipid-binding (CaLB domain) family
protein		 -0.56 0.31 -0.29
52 AT2G36560 AT hook motif DNA-binding family protein 0.56 0.32 -0.3
53 AT1G80680 SUPPRESSOR OF AUXIN RESISTANCE 3 MODIFIER OF SNC1,3, NUP96,
PRECOCIOUS, SUPPRESSOR OF AUXIN
RESISTANCE 3		 0.56 0.32 -0.31
54 AT4G04070 transposable element gene -0.56 0.29 -0.33
55 AT2G42940 Predicted AT-hook DNA-binding family protein 0.56 0.32 -0.3
56 AT2G22070 pentatricopeptide (PPR) repeat-containing protein -0.56 0.33 -0.35
57 AT2G03630 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G74220.1); Has 126 Blast hits
to 126 proteins in 28 species: Archae - 0; Bacteria - 6;
Metazoa - 7; Fungi - 5; Plants - 87; Viruses - 0; Other
Eukaryotes - 21 (source: NCBI BLink).		 -0.56 0.31 -0.33
58 AT3G56710 sigma factor binding protein 1 sigma factor binding protein 1 -0.55 0.33 -0.33
59 AT4G26000 RNA-binding KH domain-containing protein PEPPER 0.55 0.35 -0.32
60 AT4G25330 unknown protein; Has 21 Blast hits to 21 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 21; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.55 0.32 -0.33
61 AT5G58820 Subtilisin-like serine endopeptidase family protein -0.55 0.33 -0.32
62 AT2G42040 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has
219 Blast hits to 219 proteins in 19 species: Archae - 0;
Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses
- 0; Other Eukaryotes - 1 (source: NCBI BLink).		 -0.55 0.31 -0.32
63 AT3G62320 Polynucleotidyl transferase, ribonuclease H-like
superfamily protein		 -0.55 0.32 -0.31
64 AT1G48560 unknown protein; Has 75 Blast hits to 71 proteins in 10
species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0;
Plants - 69; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.55 0.32 -0.32
65 AT2G06170 transposable element gene 0.55 0.34 -0.31
66 AT5G46760 Basic helix-loop-helix (bHLH) DNA-binding family protein MYC3 -0.55 0.33 -0.3
67 AT1G12790 CONTAINS InterPro DOMAIN/s: RuvA domain 2-like
(InterPro:IPR010994); Has 29 Blast hits to 29 proteins in 9
species: Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0;
Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.31
68 AT1G22090 Protein of unknown function (DUF626) embryo defective 2204 -0.55 0.32 -0.29
69 AT2G10140 transposable element gene -0.54 0.31 -0.31
70 AT5G09340 Ubiquitin family protein -0.54 0.3 -0.33
71 AT1G62350 Pentatricopeptide repeat (PPR) superfamily protein 0.54 0.31 -0.3
72 AT2G14210 AGAMOUS-like 44 AGAMOUS-like 44, ARABIDOPSIS
NITRATE REGULATED 1		 0.54 0.32 -0.33
73 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 0.54 0.32 -0.31
74 AT2G38450 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G05360.1); Has 88 Blast hits to 88 proteins in 25
species: Archae - 0; Bacteria - 16; Metazoa - 0; Fungi - 0;
Plants - 70; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.54 0.32 -0.33
75 AT3G51560 Disease resistance protein (TIR-NBS-LRR class) family -0.54 0.3 -0.32
76 AT4G03800 transposable element gene -0.54 0.3 -0.31
77 AT1G33813 transposable element gene -0.54 0.29 -0.33
78 AT3G15220 Protein kinase superfamily protein -0.53 0.31 -0.32
79 AT3G43280 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G19240.1); Has 5 Blast hits to
5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa
- 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 -0.53 0.32 -0.33
80 AT3G43940 unknown protein; Has 24 Blast hits to 24 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.52 0.33 -0.31
81 AT3G44410 pseudogene, disease resistence protein, putative, similar
to disease resistance protein RPP1-WsB (Arabidopsis
thaliana) gi|3860165|gb|AAC72978		 -0.52 0.29 -0.3
82 AT4G22940 Protein kinase superfamily protein -0.52 0.31 -0.32
83 AT2G11690 transposable element gene -0.52 0.31 -0.3
84 AT2G26570 Plant protein of unknown function (DUF827) WEAK CHLOROPLAST MOVEMENT UNDER
BLUE LIGHT 1		 -0.52 0.32 -0.31
85 AT3G63340 Protein phosphatase 2C family protein -0.52 0.33 -0.33
86 AT4G11300 Protein of unknown function (DUF793) -0.52 0.31 -0.32
87 AT2G37910 cation/hydrogen exchanger, putative (CHX21) -0.52 0.33 -0.32
88 AT3G61010 Ferritin/ribonucleotide reductase-like family protein -0.52 0.34 -0.32
89 AT2G22000 elicitor peptide 6 precursor elicitor peptide 6 precursor -0.52 0.31 -0.32
90 AT1G29770 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.52 0.31 -0.3
91 AT1G65630 DegP protease 3 DegP protease 3 -0.51 0.31 -0.31
92 AT3G60420 Phosphoglycerate mutase family protein -0.51 0.32 -0.32
93 AT5G41490 F-box associated ubiquitination effector family protein -0.5 0.33 -0.3
94 AT1G29780 Haloacid dehalogenase-like hydrolase (HAD) superfamily
protein		 -0.5 0.3 -0.3
95 AT1G26320 Zinc-binding dehydrogenase family protein -0.5 0.34 -0.31
96 AT3G43900 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43910.1); Has 15 Blast hits
to 15 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 15; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.5 0.31 -0.3
97 AT2G45940 Protein of unknown function (DUF295) -0.5 0.33 -0.33
98 AT4G36510 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.5 0.33 -0.33
99 AT2G29250 Concanavalin A-like lectin protein kinase family protein -0.5 0.3 -0.3
100 AT2G39090 tetratricopeptide repeat (TPR)-containing protein anaphase-promoting complex 7,
AtAPC7		 -0.5 0.31 -0.34
101 AT4G11770 Galactose oxidase/kelch repeat superfamily protein -0.5 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
102 C0031 3-Methylthio-n-propylglucosinolate - 3-Methylthiopropylglucosinolate glucosinolate biosynthesis from homomethionine 0.72 0.43 -0.45 C0031
103 C0018 sn-Glycerol-3-phosphate D,L-sn-Glycerol-3-phosphate sn-Glycerol-3-phosphate CDP-diacylglycerol biosynthesis II,
phosphatidylglycerol biosynthesis II (non-plastidic),
triacylglycerol biosynthesis,
glycerol degradation IV,
glycerol-3-phosphate shuttle,
a quinone + sn-glycerol-3-phosphate -> a quinol + dihydroxyacetone phosphate,
CDP-diacylglycerol biosynthesis I,
cardiolipin biosynthesis II,
phosphatidylglycerol biosynthesis I (plastidic),
sn-glycerol-3-phosphate + a ubiquinone -> a ubiquinol + dihydroxyacetone phosphate,
an electron-transfer-related quinone + sn-glycerol-3-phosphate -> an electron-transfer-related quinol + dihydroxyacetone phosphate 		-0.65 0.48 -0.45 C0018
104 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		-0.57 0.3 -0.32 C0022