AGICode | AT1G70895 |
Description | CLAVATA3/ESR-RELATED 17 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G70895 | CLAVATA3/ESR-RELATED 17 | CLAVATA3/ESR-RELATED 17 | 1 | 0.33 | -0.32 | ||
2 | AT5G13030 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0061 (InterPro:IPR003846); Has 5046 Blast hits to 4997 proteins in 1211 species: Archae - 8; Bacteria - 2327; Metazoa - 120; Fungi - 134; Plants - 48; Viruses - 0; Other Eukaryotes - 2409 (source: NCBI BLink). |
-0.72 | 0.32 | -0.31 | |||
3 | AT3G45310 | Cysteine proteinases superfamily protein | -0.71 | 0.32 | -0.31 | |||
4 | AT2G20210 | RNI-like superfamily protein | 0.7 | 0.32 | -0.32 | |||
5 | AT1G19200 | Protein of unknown function (DUF581) | -0.68 | 0.32 | -0.31 | |||
6 | AT5G43940 | GroES-like zinc-binding dehydrogenase family protein | ALCOHOL DEHYDROGENASE 2, ATGSNOR1, S-NITROSOGLUTATHIONE REDUCTASE, sensitive to hot temperatures 5, PARAQUAT RESISTANT 2 |
-0.68 | 0.29 | -0.31 | ||
7 | AT5G11810 | unknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.68 | 0.32 | -0.32 | |||
8 | AT3G08650 | ZIP metal ion transporter family | -0.67 | 0.3 | -0.31 | |||
9 | AT5G07880 | synaptosomal-associated protein SNAP25-like 29 | ARABIDOPSIS THALIANA SYNAPTOSOMAL-ASSOCIATED PROTEIN SNAP25-LIKE 29, synaptosomal-associated protein SNAP25-like 29 |
0.66 | 0.3 | -0.31 | ||
10 | AT2G39780 | ribonuclease 2 | ribonuclease 2 | -0.66 | 0.31 | -0.3 | ||
11 | AT3G06350 | dehydroquinate dehydratase, putative / shikimate dehydrogenase, putative |
EMBRYO DEFECTIVE 3004, MATERNAL EFFECT EMBRYO ARREST 32 |
-0.65 | 0.32 | -0.3 | ||
12 | AT1G10730 | Clathrin adaptor complexes medium subunit family protein | -0.65 | 0.32 | -0.3 | |||
13 | AT4G39660 | alanine:glyoxylate aminotransferase 2 | alanine:glyoxylate aminotransferase 2 |
-0.65 | 0.32 | -0.3 | ||
14 | AT2G20360 | NAD(P)-binding Rossmann-fold superfamily protein | -0.65 | 0.31 | -0.32 | |||
15 | AT3G43520 | Transmembrane proteins 14C | -0.65 | 0.3 | -0.32 | |||
16 | AT4G11010 | nucleoside diphosphate kinase 3 | nucleoside diphosphate kinase 3 | -0.64 | 0.3 | -0.3 | ||
17 | AT1G24340 | FAD/NAD(P)-binding oxidoreductase family protein | EMBRYO DEFECTIVE 2421, EMBRYO DEFECTIVE 260 |
-0.64 | 0.34 | -0.3 | ||
18 | AT3G23150 | Signal transduction histidine kinase, hybrid-type, ethylene sensor |
ethylene response 2 | -0.64 | 0.3 | -0.32 | ||
19 | AT1G21750 | PDI-like 1-1 | ARABIDOPSIS THALIANA PROTEIN DISULFIDE ISOMERASE 5, PDI-like 1-1, PROTEIN DISULFIDE ISOMERASE 5, PDI-like 1-1 |
-0.64 | 0.3 | -0.33 | ||
20 | AT3G03120 | ADP-ribosylation factor B1C | ADP-ribosylation factor B1C, ADP-ribosylation factor B1C |
-0.64 | 0.32 | -0.33 | ||
21 | AT3G02780 | isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 |
ATISOPENTENYL DIPHOSPHE ISOMERASE 2, IPIAT1, isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase 2 |
-0.64 | 0.3 | -0.32 | ||
22 | AT1G23960 | Protein of unknown function (DUF626) | -0.64 | 0.3 | -0.34 | |||
23 | AT3G15610 | Transducin/WD40 repeat-like superfamily protein | -0.63 | 0.34 | -0.32 | |||
24 | AT3G02090 | Insulinase (Peptidase family M16) protein | MPPBETA | -0.63 | 0.32 | -0.31 | ||
25 | AT4G02620 | vacuolar ATPase subunit F family protein | -0.63 | 0.33 | -0.32 | |||
26 | AT1G08480 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion, plasma membrane, plastid, vacuole; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 15 growth stages; Has 39 Blast hits to 39 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
succinate dehydrogenase 6 | -0.63 | 0.33 | -0.29 | ||
27 | AT3G61160 | Protein kinase superfamily protein | 0.63 | 0.34 | -0.31 | |||
28 | AT1G74210 | PLC-like phosphodiesterases superfamily protein | AtGDPD5, glycerophosphodiester phosphodiesterase 5 |
-0.63 | 0.32 | -0.32 | ||
29 | AT4G23496 | SPIRAL1-like5 | SPIRAL1-like5 | 0.63 | 0.34 | -0.3 | ||
30 | AT5G37510 | NADH-ubiquinone dehydrogenase, mitochondrial, putative | CI76, embryo defective 1467 | -0.62 | 0.32 | -0.31 | ||
31 | AT5G39730 | AIG2-like (avirulence induced gene) family protein | -0.62 | 0.31 | -0.3 | |||
32 | AT3G58730 | vacuolar ATP synthase subunit D (VATD) / V-ATPase D subunit / vacuolar proton pump D subunit (VATPD) |
-0.61 | 0.28 | -0.32 | |||
33 | AT1G79230 | mercaptopyruvate sulfurtransferase 1 | ATMST1, ARABIDOPSIS THALIANA RHODANESE HOMOLOGUE 1, mercaptopyruvate sulfurtransferase 1, SULFURTRANSFERASE 1, STR1 |
-0.61 | 0.31 | -0.32 | ||
34 | AT2G21800 | essential meiotic endonuclease 1A | essential meiotic endonuclease 1A, EME1A, essential meiotic endonuclease 1A |
0.61 | 0.33 | -0.31 | ||
35 | AT5G14780 | formate dehydrogenase | formate dehydrogenase | -0.61 | 0.31 | -0.27 | ||
36 | AT2G19930 | RNA-dependent RNA polymerase family protein | 0.61 | 0.32 | -0.32 | |||
37 | AT3G50520 | Phosphoglycerate mutase family protein | -0.6 | 0.32 | -0.31 | |||
38 | AT2G47230 | DOMAIN OF UNKNOWN FUNCTION 724 6 | DOMAIN OF UNKNOWN FUNCTION 724 6, DOMAIN OF UNKNOWN FUNCTION 724 6 |
0.6 | 0.3 | -0.34 | ||
39 | AT1G79340 | metacaspase 4 | metacaspase 4, metacaspase 2d, metacaspase 4, metacaspase 2d |
-0.6 | 0.3 | -0.32 | ||
40 | AT5G62680 | Major facilitator superfamily protein | -0.6 | 0.33 | -0.31 | |||
41 | AT4G36400 | FAD-linked oxidases family protein | D-2-hydroxyglutarate dehydrogenase | -0.6 | 0.32 | -0.3 | ||
42 | AT2G05260 | alpha/beta-Hydrolases superfamily protein | -0.6 | 0.33 | -0.31 | |||
43 | AT2G44080 | ARGOS-like | ARGOS-like | -0.6 | 0.32 | -0.32 | ||
44 | AT3G13780 | SMAD/FHA domain-containing protein | -0.59 | 0.33 | -0.32 | |||
45 | AT5G20080 | FAD/NAD(P)-binding oxidoreductase | -0.59 | 0.32 | -0.34 | |||
46 | AT1G78900 | vacuolar ATP synthase subunit A | vacuolar ATP synthase subunit A | -0.58 | 0.31 | -0.32 | ||
47 | AT3G51150 | ATP binding microtubule motor family protein | 0.58 | 0.3 | -0.33 | |||
48 | AT3G10180 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
0.58 | 0.32 | -0.31 | |||
49 | AT2G02550 | PIN domain-like family protein | 0.56 | 0.32 | -0.32 | |||
50 | AT3G18160 | peroxin 3-1 | peroxin 3-1 | 0.56 | 0.31 | -0.3 | ||
51 | AT5G35870 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.55 | 0.31 | -0.31 | |||
52 | AT4G14290 | alpha/beta-Hydrolases superfamily protein | 0.55 | 0.3 | -0.32 | |||
53 | AT5G55370 | MBOAT (membrane bound O-acyl transferase) family protein | 0.54 | 0.33 | -0.32 | |||
54 | AT2G30380 | Plant protein of unknown function (DUF641) | 0.54 | 0.33 | -0.3 | |||
55 | AT4G35290 | glutamate receptor 2 | ATGLR3.2, ATGLUR2, GLUTAMATE RECEPTOR 3.2, glutamate receptor 2 |
0.54 | 0.31 | -0.32 | ||
56 | AT1G13220 | nuclear matrix constituent protein-related | CROWDED NUCLEI 2, LITTLE NUCLEI2 | 0.54 | 0.28 | -0.32 | ||
57 | AT1G49840 | Protein of unknown function (DUF620) | 0.54 | 0.33 | -0.33 | |||
58 | AT3G60010 | SKP1-like 13 | SKP1-like 13, SKP1-like 13 | 0.53 | 0.31 | -0.3 | ||
59 | AT2G18380 | GATA transcription factor 20 | GATA transcription factor 20, hanaba taranu like 1 |
0.52 | 0.32 | -0.32 | ||
60 | AT3G32160 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G43150.1); Has 28 Blast hits to 28 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.51 | 0.32 | -0.29 | |||
61 | AT3G28310 | Protein of unknown function (DUF677) | 0.51 | 0.32 | -0.32 | |||
62 | AT3G28830 | Protein of unknown function (DUF1216) | 0.51 | 0.31 | -0.31 | |||
63 | AT2G33690 | Late embryogenesis abundant protein, group 6 | 0.51 | 0.33 | -0.31 | |||
64 | AT2G19010 | GDSL-like Lipase/Acylhydrolase superfamily protein | 0.51 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
65 | C0186 | NAD | - | NAD+ | ammonia assimilation cycle II, aspartate degradation II, adenosine nucleotides degradation I, plant sterol biosynthesis II, UDP-D-xylose and UDP-D-glucuronate biosynthesis, NAD biosynthesis I (from aspartate), ethanol degradation IV (peroxisomal), abscisic acid biosynthesis, palmitate biosynthesis II (bacteria and plants), zeaxanthin biosynthesis, sucrose degradation to ethanol and lactate (anaerobic), glutamate degradation IV, stearate biosynthesis II (plants), guanosine nucleotides degradation II, glutamate degradation I, mannitol degradation II, glycerol-3-phosphate shuttle, 2-ketoglutarate dehydrogenase complex, arginine degradation I (arginase pathway), aerobic respiration (alternative oxidase pathway), branched-chain alpha-keto acid dehydrogenase complex, 4-aminobutyrate degradation IV, glycolysis I, glycine cleavage complex, lysine degradation II, fatty acid beta-oxidation II (core pathway), nitrate reduction II (assimilatory), TCA cycle variation V (plant), leucine degradation I, thiamine biosynthesis II, acetaldehyde biosynthesis I, sorbitol degradation I, glutamine biosynthesis III, aerobic respiration (cytochrome c), ethanol degradation I, ascorbate biosynthesis I (L-galactose pathway), glycolysis IV (plant cytosol), benzoate biosynthesis II (CoA-independent, non-beta-oxidative), siroheme biosynthesis, TCA cycle variation III (eukaryotic), isoleucine degradation I, pyridine nucleotide cycling (plants), tyrosine biosynthesis I, gluconeogenesis I, glycine betaine biosynthesis III (plants), traumatin and (Z)-3-hexen-1-yl acetate biosynthesis, NAD/NADH phosphorylation and dephosphorylation, guanosine nucleotides degradation I, purine nucleotides de novo biosynthesis II, acetyl-CoA biosynthesis (from pyruvate), serine biosynthesis, photorespiration, histidine biosynthesis, glyoxylate cycle, jasmonic acid biosynthesis, alanine degradation II (to D-lactate), a ubiquinone + NADH + H+ -> a ubiquinol + NAD+, putrescine degradation IV, brassinosteroid biosynthesis III, fatty acid elongation -- saturated, pyruvate fermentation to ethanol II, beta-alanine biosynthesis II, 4-hydroxybenzoate biosynthesis V, plant sterol biosynthesis, urate biosynthesis/inosine 5'-phosphate degradation, phenylalanine degradation III, glutamate biosynthesis IV, leucine biosynthesis, fatty acid alpha-oxidation, a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol, Fe(III)-reduction and Fe(II) transport, purine nucleotide metabolism (phosphotransfer and nucleotide modification), phenylethanol biosynthesis, pyruvate fermentation to lactate, superpathway of glyoxylate cycle and fatty acid degradation, fatty acid omega-oxidation, galactose degradation III, ethanol degradation II (cytosol), sucrose biosynthesis I, valine degradation I, folate transformations II |
-0.6 | 0.43 | -0.43 |