AT1G49400 : embryo defective 1129
Query Information
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AGICode AT1G49400
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G49400 Nucleic acid-binding, OB-fold-like protein embryo defective 1129 1 0.32 -0.32
2 AT2G19800 myo-inositol oxygenase 2 myo-inositol oxygenase 2 0.79 0.33 -0.31
3 AT1G03900 non-intrinsic ABC protein 4 ATP-binding cassette I18,
non-intrinsic ABC protein 4,
non-intrinsic ABC protein 4		 0.78 0.3 -0.31
4 AT1G69680 Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP
family protein		 0.75 0.31 -0.34
5 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.74 0.29 -0.31
6 AT3G29810 COBRA-like protein 2 precursor COBRA-like protein 2 precursor 0.73 0.31 -0.31
7 AT4G11330 MAP kinase 5 MAP kinase 5, MAP kinase 5 -0.72 0.32 -0.32
8 AT1G77840 Translation initiation factor IF2/IF5 0.71 0.33 -0.34
9 AT1G10090 Early-responsive to dehydration stress protein (ERD4) -0.71 0.32 -0.3
10 AT4G11120 translation elongation factor Ts (EF-Ts), putative 0.71 0.31 -0.33
11 AT4G10750 Phosphoenolpyruvate carboxylase family protein 0.71 0.29 -0.29
12 AT3G20860 NIMA-related kinase 5 NIMA-related kinase 5,
NIMA-related kinase 5		 -0.7 0.31 -0.32
13 AT4G16210 enoyl-CoA hydratase/isomerase A ENOYL-COA HYDRATASE 2, enoyl-CoA
hydratase/isomerase A		 0.7 0.31 -0.31
14 AT5G44670 Domain of unknown function (DUF23) -0.7 0.32 -0.32
15 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.69 0.32 -0.31
16 AT2G26140 FTSH protease 4 FTSH protease 4 0.69 0.31 -0.3
17 AT1G74160 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits
to 2217 proteins in 314 species: Archae - 0; Bacteria -
264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses -
34; Other Eukaryotes - 1149 (source: NCBI BLink).		 -0.68 0.29 -0.3
18 AT5G08430 SWIB/MDM2 domain;Plus-3;GYF -0.67 0.32 -0.31
19 AT3G11590 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
22 plant structures; EXPRESSED DURING: 13 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G22310.1); Has 22320 Blast hits to 15179 proteins
in 1213 species: Archae - 372; Bacteria - 2307; Metazoa -
10906; Fungi - 1700; Plants - 1146; Viruses - 65; Other
Eukaryotes - 5824 (source: NCBI BLink).		 -0.67 0.33 -0.3
20 AT2G17270 phosphate transporter 3;3 phosphate transporter 3;3 -0.67 0.32 -0.33
21 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.67 0.31 -0.3
22 AT2G29210 splicing factor PWI domain-containing protein -0.67 0.3 -0.34
23 AT1G67850 Protein of unknown function (DUF707) -0.66 0.33 -0.3
24 AT3G48680 gamma carbonic anhydrase-like 2 AtCAL2, gamma carbonic
anhydrase-like 2		 0.66 0.32 -0.35
25 AT5G62650 Tic22-like family protein 0.66 0.33 -0.3
26 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein -0.66 0.32 -0.33
27 AT5G53560 cytochrome B5 isoform E ATB5-A, ARABIDOPSIS CYTOCHROME B5
ISOFORM E, B5 #2, cytochrome B5
isoform E		 0.66 0.32 -0.31
28 AT5G37180 sucrose synthase 5 ARABIDOPSIS THALIANA SUCROSE
SYNTHASE 5, sucrose synthase 5		 -0.65 0.33 -0.32
29 AT1G02160 Cox19 family protein (CHCH motif) 0.65 0.32 -0.31
30 AT3G19960 myosin 1 myosin 1 -0.65 0.33 -0.31
31 AT1G08350 Endomembrane protein 70 protein family 0.64 0.32 -0.3
32 AT4G40040 Histone superfamily protein 0.64 0.32 -0.3
33 AT3G63390 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.64 0.3 -0.31
34 AT5G15880 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.64 0.32 -0.31
35 AT2G43800 Actin-binding FH2 (formin homology 2) family protein -0.64 0.32 -0.31
36 AT1G16570 UDP-Glycosyltransferase superfamily protein 0.63 0.31 -0.32
37 AT4G32690 hemoglobin 3 ARABIDOPSIS HEMOGLOBIN 3,
hemoglobin 3		 0.63 0.34 -0.33
38 AT1G17110 ubiquitin-specific protease 15 ubiquitin-specific protease 15 -0.63 0.32 -0.33
39 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 0.63 0.31 -0.34
40 AT1G20450 Dehydrin family protein EARLY RESPONSIVE TO DEHYDRATION
10, LOW TEMPERATURE INDUCED 29,
LOW TEMPERATURE INDUCED 45		 -0.63 0.32 -0.31
41 AT3G22680 RNA-DIRECTED DNA METHYLATION 1 RNA-DIRECTED DNA METHYLATION 1 0.63 0.31 -0.32
42 AT4G14760 kinase interacting (KIP1-like) family protein -0.63 0.33 -0.31
43 AT3G23100 homolog of human DNA ligase iv-binding protein XRCC4 homolog of human DNA ligase
iv-binding protein XRCC4		 0.62 0.31 -0.31
44 AT3G14180 sequence-specific DNA binding transcription factors Arabidopsis 6B-interacting
protein 1-like 2		 0.62 0.32 -0.31
45 AT5G45610 protein dimerizations SENSITIVE TO UV 2 -0.62 0.3 -0.33
46 AT2G35900 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
nucleus; EXPRESSED IN: 20 plant structures; EXPRESSED
DURING: 13 growth stages; Has 32 Blast hits to 32 proteins
in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi
- 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 0.62 0.3 -0.34
47 AT1G73120 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to oxidative stress; EXPRESSED IN:
root, cultured cell; Has 36 Blast hits to 36 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.62 0.32 -0.32
48 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein -0.62 0.3 -0.33
49 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.62 0.31 -0.31
50 AT4G34340 TBP-associated factor 8 TBP-associated factor 8 -0.62 0.32 -0.28
51 AT4G13520 small acidic protein 1 small acidic protein 1 0.62 0.32 -0.33
52 AT5G53660 growth-regulating factor 7 growth-regulating factor 7,
growth-regulating factor 7		 -0.61 0.34 -0.29
53 AT3G26560 ATP-dependent RNA helicase, putative -0.61 0.3 -0.29
54 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 0.61 0.31 -0.29
55 AT5G65830 receptor like protein 57 receptor like protein 57, receptor
like protein 57		 0.6 0.33 -0.29
56 AT2G28550 related to AP2.7 related to AP2.7, TARGET OF EARLY
ACTIVATION TAGGED (EAT) 1		 -0.6 0.29 -0.31
57 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 0.6 0.3 -0.3
58 AT2G03690 coenzyme Q biosynthesis Coq4 family protein / ubiquinone
biosynthesis Coq4 family protein		 0.6 0.32 -0.31
59 AT5G04390 C2H2-type zinc finger family protein 0.6 0.31 -0.31
60 AT4G25480 dehydration response element B1A ATCBF3, C-REPEAT BINDING FACTOR
3, dehydration response element
B1A		 -0.6 0.31 -0.3
61 AT2G32000 DNA topoisomerase, type IA, core -0.6 0.32 -0.31
62 AT2G43350 glutathione peroxidase 3 glutathione peroxidase 3,
glutathione peroxidase 3		 0.6 0.3 -0.33
63 AT4G14965 membrane-associated progesterone binding protein 4 membrane-associated progesterone
binding protein 4,
membrane-associated progesterone
binding protein 4		 0.6 0.31 -0.31
64 AT3G21650 Protein phosphatase 2A regulatory B subunit family protein -0.59 0.32 -0.32
65 AT2G47850 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.59 0.33 -0.32
66 AT5G50720 HVA22 homologue E ARABIDOPSIS THALIANA HVA22
HOMOLOGUE E, HVA22 homologue E		 -0.59 0.34 -0.32
67 AT5G52230 methyl-CPG-binding domain protein 13 methyl-CPG-binding domain protein
13		 -0.59 0.32 -0.31
68 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily -0.58 0.32 -0.3
69 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.58 0.33 -0.33
70 AT1G75410 BEL1-like homeodomain 3 BEL1-like homeodomain 3 -0.58 0.32 -0.34
71 AT2G17840 Senescence/dehydration-associated protein-related EARLY-RESPONSIVE TO DEHYDRATION 7 -0.58 0.33 -0.31
72 AT5G18550 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.57 0.31 -0.31
73 AT4G17950 AT hook motif DNA-binding family protein -0.57 0.31 -0.3
74 AT1G27920 microtubule-associated protein 65-8 microtubule-associated protein
65-8		 -0.56 0.32 -0.34
75 AT1G21790 TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing
protein		 -0.56 0.32 -0.31
76 AT1G10000 Ribonuclease H-like superfamily protein -0.56 0.3 -0.34
77 AT5G22720 F-box/RNI-like superfamily protein -0.56 0.34 -0.31
78 AT2G04660 anaphase-promoting complex/cyclosome 2 anaphase-promoting
complex/cyclosome 2		 -0.56 0.32 -0.31
79 AT1G68470 Exostosin family protein -0.56 0.32 -0.31
80 AT1G32810 RING/FYVE/PHD zinc finger superfamily protein -0.56 0.35 -0.3
81 AT4G21060 Galactosyltransferase family protein -0.56 0.31 -0.32
82 AT5G57660 CONSTANS-like 5 ATCOL5, CONSTANS-like 5 -0.55 0.31 -0.32
83 AT3G19350 maternally expressed pab C-terminal maternally expressed pab
C-terminal		 -0.55 0.31 -0.3
84 AT1G19880 Regulator of chromosome condensation (RCC1) family protein -0.55 0.29 -0.32
85 AT3G47620 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 TEOSINTE BRANCHED, cycloidea and
PCF (TCP) 14, TEOSINTE BRANCHED,
cycloidea and PCF (TCP) 14		 -0.55 0.3 -0.31
86 AT4G05620 Galactose oxidase/kelch repeat superfamily protein -0.55 0.31 -0.3
87 AT3G56760 Protein kinase superfamily protein -0.55 0.33 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
88 C0003 α-Tocopherol - alpha-Tocopherol vitamin E biosynthesis -0.81 0.47 -0.48 C0003
89 C0087 Erythrose-4-phosphate D-Erythrose-4-phosphate D-Erythrose-4-phosphate Rubisco shunt,
pentose phosphate pathway (non-oxidative branch),
chorismate biosynthesis,
Calvin-Benson-Bassham cycle 		-0.76 0.41 -0.44 C0087
90 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.74 0.47 -0.42 C0015
91 C0094 Galactosamine D-Galactosamine - - -0.71 0.45 -0.42
92 C0006 β-Homothreonine L-β-Homothreonine - - -0.7 0.46 -0.45
93 C0011 N-Acetyl-glutamic acid N-Acetyl-D,L-glutamic acid N-Acetyl-L-glutamate arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		-0.6 0.45 -0.45 C0011
94 C0005 β-Fructose-6-phosphate β-D-Fructose-6-phosphate D-Fructose-6-phosphate starch biosynthesis,
Rubisco shunt,
Calvin-Benson-Bassham cycle,
mannitol degradation II,
ascorbate biosynthesis I (L-galactose pathway),
UDP-N-acetyl-D-glucosamine biosynthesis II,
GDP-mannose biosynthesis,
mannose degradation,
sucrose biosynthesis I,
sucrose degradation III,
glycolysis IV (plant cytosol),
pentose phosphate pathway (non-oxidative branch),
glycolysis I,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
D-mannose degradation,
gluconeogenesis I 		-0.57 0.31 -0.33 C0005
95 C0218 Pyridoxamine phosphate Pyridoxamine-5'-phosphate Pyridoxamine-5'-phosphate pyridoxal 5'-phosphate salvage pathway -0.57 0.32 -0.31 C0218
96 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		-0.57 0.33 -0.33 C0066
97 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		-0.57 0.3 -0.31 C0061