AGICode | AT1G47660 |
Description | unknown protein; Has 5165 Blast hits to 2753 proteins in 450 species: Archae - 12; Bacteria - 1193; Metazoa - 731; Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes - 1931 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G47660 | unknown protein; Has 5165 Blast hits to 2753 proteins in 450 species: Archae - 12; Bacteria - 1193; Metazoa - 731; Fungi - 361; Plants - 761; Viruses - 176; Other Eukaryotes - 1931 (source: NCBI BLink). |
1 | 0.32 | -0.32 | |||
2 | AT5G01990 | Auxin efflux carrier family protein | -0.7 | 0.33 | -0.31 | |||
3 | AT5G66050 | Wound-responsive family protein | -0.68 | 0.33 | -0.33 | |||
4 | AT2G20150 | unknown protein; Has 5 Blast hits to 5 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.67 | 0.32 | -0.29 | |||
5 | AT5G52690 | Copper transport protein family | -0.66 | 0.32 | -0.32 | |||
6 | AT2G26430 | arginine-rich cyclin 1 | ARGININE-RICH CYCLIN 1, arginine-rich cyclin 1 |
-0.66 | 0.31 | -0.31 | ||
7 | AT4G37950 | Rhamnogalacturonate lyase family protein | 0.65 | 0.32 | -0.33 | |||
8 | AT3G47160 | RING/U-box superfamily protein | -0.65 | 0.31 | -0.3 | |||
9 | AT2G47010 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G17030.1); Has 72 Blast hits to 72 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 71; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
0.64 | 0.3 | -0.35 | |||
10 | AT4G37220 | Cold acclimation protein WCOR413 family | -0.64 | 0.32 | -0.32 | |||
11 | AT2G44950 | histone mono-ubiquitination 1 | histone mono-ubiquitination 1, REDUCED DORMANCY 4 |
-0.64 | 0.3 | -0.33 | ||
12 | AT1G06260 | Cysteine proteinases superfamily protein | 0.64 | 0.31 | -0.32 | |||
13 | AT1G64050 | unknown protein; Has 524 Blast hits to 342 proteins in 101 species: Archae - 0; Bacteria - 106; Metazoa - 106; Fungi - 24; Plants - 25; Viruses - 0; Other Eukaryotes - 263 (source: NCBI BLink). |
-0.64 | 0.32 | -0.32 | |||
14 | AT1G14530 | Protein of unknown function (DUF1084) | TOM THREE HOMOLOG 1 | -0.64 | 0.31 | -0.32 | ||
15 | AT5G65090 | DNAse I-like superfamily protein | BRISTLED 1, DEFORMED ROOT HAIRS 4, MRH3 |
0.63 | 0.31 | -0.3 | ||
16 | AT2G04820 | transposable element gene | 0.63 | 0.32 | -0.3 | |||
17 | AT5G44080 | Basic-leucine zipper (bZIP) transcription factor family protein |
-0.63 | 0.3 | -0.3 | |||
18 | AT5G57160 | DNA ligase IV | ATLIG4, DNA LIGASE IV | 0.63 | 0.28 | -0.32 | ||
19 | AT2G32510 | mitogen-activated protein kinase kinase kinase 17 | mitogen-activated protein kinase kinase kinase 17 |
-0.63 | 0.29 | -0.32 | ||
20 | AT4G00630 | K+ efflux antiporter 2 | ATKEA2, K+ efflux antiporter 2 | -0.62 | 0.32 | -0.34 | ||
21 | AT3G51770 | tetratricopeptide repeat (TPR)-containing protein | ARABIDOPSIS ETHYLENE OVERPRODUCER 1, ETHYLENE OVERPRODUCER 1 |
-0.62 | 0.33 | -0.31 | ||
22 | AT3G09000 | proline-rich family protein | -0.62 | 0.31 | -0.3 | |||
23 | AT5G60870 | Regulator of chromosome condensation (RCC1) family protein | RCC1/UVR8/GEF-like 3 | 0.62 | 0.33 | -0.31 | ||
24 | AT1G13810 | Restriction endonuclease, type II-like superfamily protein | 0.62 | 0.31 | -0.32 | |||
25 | AT5G01550 | lectin receptor kinase a4.1 | lectin receptor kinase a4.1 | 0.62 | 0.33 | -0.3 | ||
26 | AT1G55590 | RNI-like superfamily protein | -0.61 | 0.32 | -0.31 | |||
27 | AT4G04410 | transposable element gene | 0.61 | 0.31 | -0.3 | |||
28 | AT2G06150 | transposable element gene | 0.61 | 0.31 | -0.3 | |||
29 | AT5G57590 | adenosylmethionine-8-amino-7-oxononanoate transaminases | biotin auxotroph 1 | -0.61 | 0.32 | -0.34 | ||
30 | AT3G57785 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G42310.1); Has 121 Blast hits to 121 proteins in 51 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 48; Plants - 67; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.61 | 0.3 | -0.32 | |||
31 | AT3G22940 | F-box associated ubiquitination effector family protein | -0.61 | 0.32 | -0.31 | |||
32 | AT5G18870 | Inosine-uridine preferring nucleoside hydrolase family protein |
nucleoside hydrolase 5 | -0.6 | 0.31 | -0.3 | ||
33 | AT3G20770 | Ethylene insensitive 3 family protein | AtEIN3, ETHYLENE-INSENSITIVE3 | -0.6 | 0.34 | -0.31 | ||
34 | AT4G03840 | transposable element gene | -0.6 | 0.32 | -0.3 | |||
35 | AT3G42440 | transposable element gene | 0.6 | 0.33 | -0.32 | |||
36 | AT5G54260 | DNA repair and meiosis protein (Mre11) | ARABIDOPSIS MEIOTIC RECOMBINATION 11, MEIOTIC RECOMBINATION 11 |
0.6 | 0.3 | -0.32 | ||
37 | AT2G15890 | maternal effect embryo arrest 14 | maternal effect embryo arrest 14 | -0.6 | 0.33 | -0.33 | ||
38 | AT1G17090 | unknown protein; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.31 | -0.32 | |||
39 | AT5G22680 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: F-box/RNI-like superfamily protein (TAIR:AT5G22720.2); Has 65 Blast hits to 64 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 65; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.59 | 0.32 | -0.33 | |||
40 | AT1G61400 | S-locus lectin protein kinase family protein | 0.59 | 0.3 | -0.33 | |||
41 | AT2G15130 | Plant basic secretory protein (BSP) family protein | 0.59 | 0.31 | -0.3 | |||
42 | AT1G69295 | plasmodesmata callose-binding protein 4 | plasmodesmata callose-binding protein 4 |
-0.58 | 0.31 | -0.31 | ||
43 | AT2G31700 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.31 | -0.31 | |||
44 | AT5G10860 | Cystathionine beta-synthase (CBS) family protein | CBS domain containing protein 3 | -0.58 | 0.31 | -0.31 | ||
45 | AT5G64110 | Peroxidase superfamily protein | -0.58 | 0.31 | -0.32 | |||
46 | AT1G48290 | transposable element gene | 0.58 | 0.31 | -0.3 | |||
47 | AT1G41797 | transposable element gene | -0.58 | 0.31 | -0.31 | |||
48 | AT1G49940 | BEST Arabidopsis thaliana protein match is: Tetratricopeptide repeat (TPR)-like superfamily protein (TAIR:AT1G04770.1); Has 40 Blast hits to 40 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). |
-0.57 | 0.31 | -0.34 | |||
49 | AT1G68610 | PLANT CADMIUM RESISTANCE 11 | PLANT CADMIUM RESISTANCE 11 | -0.57 | 0.32 | -0.29 | ||
50 | AT5G16560 | Homeodomain-like superfamily protein | KANADI, KANADI 1 | -0.57 | 0.33 | -0.32 | ||
51 | AT2G40300 | ferritin 4 | ferritin 4, ferritin 4 | 0.57 | 0.34 | -0.29 | ||
52 | AT1G63670 | Protein of unknown function (DUF3741) | 0.56 | 0.32 | -0.3 | |||
53 | AT5G02390 | Protein of unknown function (DUF3741) | DUO1-activated unknown 1 | -0.56 | 0.3 | -0.31 | ||
54 | AT3G27530 | golgin candidate 6 | golgin candidate 6, MAIGO 4 | -0.56 | 0.29 | -0.32 | ||
55 | AT5G10220 | annexin 6 | annexin 6, ANNEXIN ARABIDOPSIS THALIANA 6 |
0.56 | 0.33 | -0.31 | ||
56 | AT4G01120 | G-box binding factor 2 | BASIC REGION/LEUCINE ZIPPER MOTIF 5, G-box binding factor 2 |
-0.56 | 0.32 | -0.32 | ||
57 | AT5G63320 | nuclear protein X1 | nuclear protein X1 | -0.56 | 0.33 | -0.35 | ||
58 | AT5G49790 | transposable element gene | -0.56 | 0.32 | -0.32 | |||
59 | AT2G05170 | vacuolar protein sorting 11 | vacuolar protein sorting 11, vacuolar protein sorting 11 |
0.56 | 0.3 | -0.3 | ||
60 | AT5G13530 | protein kinases;ubiquitin-protein ligases | KEEP ON GOING | -0.56 | 0.32 | -0.31 | ||
61 | AT5G24280 | gamma-irradiation and mitomycin c induced 1 | GAMMA-IRRADIATION AND MITOMYCIN C INDUCED 1 |
0.56 | 0.33 | -0.3 | ||
62 | AT4G03930 | Plant invertase/pectin methylesterase inhibitor superfamily | -0.56 | 0.32 | -0.31 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
63 | C0258 | Tryptophan amide (NH3+) | D,L-Tryptophan amide (NH3+) | - | - | -0.82 | 0.45 | -0.4 | ||
64 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.71 | 0.43 | -0.43 | ||
65 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
-0.71 | 0.47 | -0.45 | ||
66 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.69 | 0.46 | -0.47 | ||
67 | C0085 | Digalactosyldiacylglycerol-36:6 | - | Digalactosyldiacylglycerol-36:6 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.68 | 0.44 | -0.49 | ||
68 | C0247 | Sulfoquinovosyldiacylglycerol-34:3 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.68 | 0.5 | -0.49 | ||
69 | C0234 | Sinapoyl glucose | 1-O-Sinapoyl-β-D-glucose | 1-O-Sinapoyl-β-D-glucose | sinapate ester biosynthesis | -0.68 | 0.43 | -0.44 | ||
70 | C0251 | Sulfoquinovosyldiacylglycerol-36:6 | - | Sulfoquinovosyldiacylglycerol | sulfolipid biosynthesis | -0.67 | 0.49 | -0.46 | ||
71 | C0084 | Digalactosyldiacylglycerol-36:5 | - | Digalactosyldiacylglycerol-36:5 | triacylglycerol degradation, linoleate biosynthesis I, glycolipid biosynthesis, glutathione redox reactions I |
-0.66 | 0.5 | -0.52 | ||
72 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.62 | 0.45 | -0.44 | ||
73 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.62 | 0.43 | -0.42 | ||
74 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.61 | 0.48 | -0.45 | ||
75 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.61 | 0.41 | -0.43 |