AT1G62850 : -
Query Information
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AGICode AT1G62850
Description Class I peptide chain release factor
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G62850 Class I peptide chain release factor 1 0.31 -0.31
2 AT3G53710 ARF-GAP domain 6 ARF-GAP domain 6 0.84 0.3 -0.32
3 AT1G59900 pyruvate dehydrogenase complex E1 alpha subunit pyruvate dehydrogenase complex E1
alpha subunit, pyruvate
dehydrogenase complex E1 alpha
subunit		 0.81 0.3 -0.31
4 AT1G52760 lysophospholipase 2 lysophospholipase 2 0.8 0.32 -0.32
5 AT4G11830 phospholipase D gamma 2 phospholipase D gamma 2 0.79 0.28 -0.29
6 AT4G11100 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G03060.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.77 0.32 -0.33
7 AT1G68370 Chaperone DnaJ-domain superfamily protein ALTERED RESPONSE TO GRAVITY 1 0.76 0.31 -0.31
8 AT4G13050 Acyl-ACP thioesterase 0.76 0.31 -0.29
9 AT5G08535 D111/G-patch domain-containing protein 0.75 0.31 -0.32
10 AT5G39950 thioredoxin 2 Arabidopsis thioredoxin h2,
thioredoxin 2, ATTRXH2,
thioredoxin 2, THIOREDOXIN H2		 0.74 0.32 -0.31
11 AT1G47250 20S proteasome alpha subunit F2 20S proteasome alpha subunit F2 0.74 0.3 -0.31
12 AT5G37830 oxoprolinase 1 oxoprolinase 1 0.73 0.3 -0.3
13 AT1G65290 mitochondrial acyl carrier protein 2 mitochondrial acyl carrier protein
2		 0.73 0.29 -0.32
14 AT4G19240 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G43280.1); Has 19 Blast hits
to 17 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 19; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.31 -0.33
15 AT5G20580 BEST Arabidopsis thaliana protein match is: FRIGIDA
interacting protein 1 (TAIR:AT2G06005.1); Has 167 Blast
hits to 167 proteins in 73 species: Archae - 0; Bacteria -
25; Metazoa - 58; Fungi - 25; Plants - 43; Viruses - 0;
Other Eukaryotes - 16 (source: NCBI BLink).		 0.72 0.32 -0.3
16 AT1G74320 Protein kinase superfamily protein 0.72 0.31 -0.33
17 AT5G17870 plastid-specific 50S ribosomal protein 6 plastid-specific 50S ribosomal
protein 6		 0.72 0.31 -0.31
18 AT1G47420 succinate dehydrogenase 5 succinate dehydrogenase 5 0.72 0.31 -0.32
19 AT4G12060 Double Clp-N motif protein 0.71 0.32 -0.33
20 AT1G73200 Putative integral membrane protein conserved region
(DUF2404)		 0.71 0.3 -0.32
21 AT5G05750 DNAJ heat shock N-terminal domain-containing protein 0.71 0.32 -0.29
22 AT1G61150 LisH and RanBPM domains containing protein 0.71 0.32 -0.31
23 AT5G10620 methyltransferases 0.71 0.31 -0.31
24 AT4G13630 Protein of unknown function, DUF593 0.7 0.32 -0.3
25 AT1G58150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: in 9 processes; LOCATED IN: cellular_component
unknown; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1 Blast hits to 1 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.7 0.31 -0.29
26 AT5G37290 ARM repeat superfamily protein 0.7 0.32 -0.31
27 AT4G13520 small acidic protein 1 small acidic protein 1 0.7 0.32 -0.29
28 AT1G63880 Disease resistance protein (TIR-NBS-LRR class) family 0.69 0.32 -0.29
29 AT1G61790 Oligosaccharyltransferase complex/magnesium transporter
family protein		 0.69 0.31 -0.34
30 AT5G51980 Transducin/WD40 repeat-like superfamily protein 0.69 0.29 -0.33
31 AT1G64100 pentatricopeptide (PPR) repeat-containing protein -0.69 0.31 -0.31
32 AT5G26270 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.69 0.31 -0.32
33 AT5G03345 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: endomembrane
system; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Magnesium transporter (InterPro:IPR018937); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.69 0.32 -0.32
34 AT5G28050 Cytidine/deoxycytidylate deaminase family protein 0.69 0.32 -0.33
35 AT1G66540 Cytochrome P450 superfamily protein 0.69 0.33 -0.32
36 AT1G52100 Mannose-binding lectin superfamily protein 0.68 0.32 -0.3
37 AT5G17890 DA1-related protein 4 CHILLING SENSITIVE 3, DA1-related
protein 4		 0.68 0.31 -0.33
38 AT4G08280 Thioredoxin superfamily protein 0.68 0.32 -0.3
39 AT1G79000 histone acetyltransferase of the CBP family 1 ARABIDOPSIS HISTONE
ACETYLTRANSFERASE OF THE CBP
FAMILY 1, ARABIDOPSIS THALIANA
P300/CBP ACETYLTRANSFERASE-RELATED
PROTEIN 2, histone
acetyltransferase of the CBP
family 1, P300/CBP
ACETYLTRANSFERASE-RELATED PROTEIN
2		 0.68 0.31 -0.32
40 AT5G38630 cytochrome B561-1 cytochrome B561-1, cytochrome
B561-1		 0.68 0.32 -0.32
41 AT1G78320 glutathione S-transferase TAU 23 glutathione S-transferase TAU 23,
glutathione S-transferase TAU 23		 -0.67 0.31 -0.33
42 AT1G52260 PDI-like 1-5 ARABIDOPSIS THALIANA PROTEIN
DISULFIDE ISOMERASE 3, PDI-like
1-5, PROTEIN DISULFIDE ISOMERASE
3, PDI-like 1-5		 0.67 0.3 -0.31
43 AT1G49950 telomere repeat binding factor 1 TELOMERE REPEAT BINDING FACTOR 1,
telomere repeat binding factor 1		 0.66 0.32 -0.33
44 AT1G64270 transposable element gene 0.66 0.32 -0.31
45 AT4G30760 Putative endonuclease or glycosyl hydrolase 0.66 0.31 -0.33
46 AT4G23840 Leucine-rich repeat (LRR) family protein -0.66 0.32 -0.3
47 AT5G23230 nicotinamidase 2 nicotinamidase 2 0.66 0.32 -0.3
48 AT1G65280 DNAJ heat shock N-terminal domain-containing protein 0.66 0.32 -0.29
49 AT1G77080 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 27, FLOWERING LOCUS
M, MADS AFFECTING FLOWERING 1		 0.66 0.33 -0.34
50 AT5G23570 XS domain-containing protein / XS zinc finger
domain-containing protein-related		 SUPPRESSOR OF GENE SILENCING 3,
SUPPRESSOR OF GENE SILENCING 3		 -0.65 0.31 -0.34
51 AT5G23710 DNA binding;DNA-directed RNA polymerases 0.65 0.31 -0.31
52 AT5G27270 Tetratricopeptide repeat (TPR)-like superfamily protein EMBRYO DEFECTIVE 976 0.65 0.31 -0.34
53 AT5G03370 acylphosphatase family 0.64 0.3 -0.31
54 AT5G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 23 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G01130.1); Has 64 Blast hits to 64 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.64 0.31 -0.33
55 AT1G57770 FAD/NAD(P)-binding oxidoreductase family protein 0.63 0.31 -0.29
56 AT5G37130 Protein prenylyltransferase superfamily protein -0.63 0.32 -0.29
57 AT3G53370 S1FA-like DNA-binding protein 0.63 0.29 -0.32
58 AT1G65370 TRAF-like family protein 0.63 0.31 -0.33
59 AT5G35730 EXS (ERD1/XPR1/SYG1) family protein 0.62 0.32 -0.32
60 AT1G67550 urease urease 0.62 0.31 -0.32
61 AT4G22960 Protein of unknown function (DUF544) -0.62 0.29 -0.31
62 AT5G26980 syntaxin of plants 41 ATSYP41, ATTLG2A, syntaxin of
plants 41		 0.62 0.3 -0.32
63 AT5G05890 UDP-Glycosyltransferase superfamily protein 0.62 0.32 -0.3
64 AT4G09680 conserved telomere maintenance component 1 ATCTC1, conserved telomere
maintenance component 1		 0.62 0.32 -0.31
65 AT1G48820 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 0.62 0.28 -0.31
66 AT4G32960 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G32970.1); Has 106 Blast hits
to 106 proteins in 39 species: Archae - 0; Bacteria - 0;
Metazoa - 62; Fungi - 0; Plants - 37; Viruses - 0; Other
Eukaryotes - 7 (source: NCBI BLink).		 0.62 0.33 -0.33
67 AT1G60710 NAD(P)-linked oxidoreductase superfamily protein ATB2 0.61 0.31 -0.29
68 AT5G16160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 0.61 0.33 -0.34
69 AT4G11410 NAD(P)-binding Rossmann-fold superfamily protein 0.61 0.3 -0.34
70 AT1G64300 Protein kinase family protein 0.61 0.32 -0.31
71 AT5G27670 histone H2A 7 histone H2A 7 0.6 0.28 -0.36
72 AT1G62830 LSD1-like 1 ARABIDOPSIS LYSINE-SPECIFIC
HISTONE DEMETHYLASE, ATSWP1,
LSD1-like 1, LYSINE-SPECIFIC
HISTONE DEMETHYLASE, SWP1		 0.6 0.3 -0.32
73 AT1G71440 tubulin folding cofactor E / Pfifferling (PFI) PFIFFERLING, TUBULIN-FOLDING
COFACTOR E		 0.6 0.35 -0.32
74 AT1G50290 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.6 0.32 -0.32
75 AT1G51360 dimeric A/B barrel domainS-protein 1 DIMERIC A/B BARREL DOMAINS-PROTEIN
1, dimeric A/B barrel
domainS-protein 1		 0.6 0.3 -0.3
76 AT1G49000 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G18560.1); Has
105 Blast hits to 105 proteins in 13 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.33
77 AT5G28030 L-cysteine desulfhydrase 1 L-cysteine desulfhydrase 1 -0.6 0.31 -0.33
78 AT5G45230 Disease resistance protein (TIR-NBS-LRR class) family 0.59 0.29 -0.32
79 AT3G56670 BEST Arabidopsis thaliana protein match is: F-box and
associated interaction domains-containing protein
(TAIR:AT1G32420.1); Has 58 Blast hits to 47 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 58; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.59 0.32 -0.34
80 AT5G26830 Threonyl-tRNA synthetase -0.59 0.33 -0.32
81 AT5G17880 disease resistance protein (TIR-NBS-LRR class) constitutive shade-avoidance1 0.59 0.3 -0.31
82 AT1G52720 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G15630.1); Has 61 Blast hits
to 61 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 61; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.59 0.3 -0.32
83 AT1G18180 Protein of unknown function (DUF1295) 0.59 0.32 -0.32
84 AT3G05860 MADS-box transcription factor family protein 0.58 0.33 -0.3
85 AT4G36380 Cytochrome P450 superfamily protein ROTUNDIFOLIA 3 -0.58 0.31 -0.33
86 AT5G03200 RING/U-box superfamily protein 0.58 0.32 -0.32
87 AT4G05320 polyubiquitin 10 polyubiquitin 10 0.58 0.32 -0.3
88 AT5G39990 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 0.57 0.3 -0.33
89 AT1G80290 Nucleotide-diphospho-sugar transferases superfamily protein -0.57 0.32 -0.32
90 AT4G22280 F-box/RNI-like superfamily protein -0.57 0.31 -0.3
91 AT5G55180 O-Glycosyl hydrolases family 17 protein -0.57 0.29 -0.31
92 AT4G09510 cytosolic invertase 2 alkaline/neutral invertase I,
cytosolic invertase 2		 0.57 0.32 -0.3
93 AT1G69720 heme oxygenase 3 heme oxygenase 3 -0.57 0.31 -0.33
94 AT5G22510 alkaline/neutral invertase alkaline/neutral invertase E,
Arabidopsis alkaline/neutral
invertase E, alkaline/neutral
invertase E		 0.57 0.3 -0.31
95 AT4G25100 Fe superoxide dismutase 1 ARABIDOPSIS FE SUPEROXIDE
DISMUTASE 1, Fe superoxide
dismutase 1		 0.57 0.31 -0.31
96 AT1G71350 eukaryotic translation initiation factor SUI1 family
protein		 -0.57 0.3 -0.28
97 AT1G68930 pentatricopeptide (PPR) repeat-containing protein 0.56 0.33 -0.31
98 AT1G51430 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G28370.1); Has 13 Blast hits
to 13 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.56 0.31 -0.32
99 AT1G56210 Heavy metal transport/detoxification superfamily protein -0.56 0.3 -0.31
100 AT5G03470 Protein phosphatase 2A regulatory B subunit family protein ATB' ALPHA -0.56 0.35 -0.32
101 AT1G64490 DEK, chromatin associated protein 0.56 0.32 -0.31
102 AT4G27050 F-box/RNI-like superfamily protein -0.56 0.32 -0.31
103 AT3G53220 Thioredoxin superfamily protein 0.56 0.31 -0.31
104 AT5G50110 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.56 0.33 -0.32
105 AT5G06820 STRUBBELIG-receptor family 2 STRUBBELIG-receptor family 2 -0.55 0.32 -0.31
106 AT3G19350 maternally expressed pab C-terminal maternally expressed pab
C-terminal		 -0.54 0.32 -0.3
107 AT4G31570 CONTAINS InterPro DOMAIN/s: Prefoldin (InterPro:IPR009053);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G24460.1); Has 194354 Blast hits to 66887 proteins
in 3244 species: Archae - 3688; Bacteria - 38556; Metazoa -
84828; Fungi - 17265; Plants - 10589; Viruses - 805; Other
Eukaryotes - 38623 (source: NCBI BLink).		 -0.54 0.32 -0.31
108 AT3G30180 brassinosteroid-6-oxidase 2 brassinosteroid-6-oxidase 2,
CYP85A2		 -0.54 0.32 -0.31
109 AT1G27590 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF3453 (InterPro:IPR021850); BEST Arabidopsis thaliana
protein match is: phosphatidylinositol 3- and 4-kinase
family protein (TAIR:AT1G27570.1); Has 109 Blast hits to
109 proteins in 38 species: Archae - 0; Bacteria - 0;
Metazoa - 65; Fungi - 4; Plants - 38; Viruses - 0; Other
Eukaryotes - 2 (source: NCBI BLink).		 -0.54 0.32 -0.31
110 AT1G72220 RING/U-box superfamily protein -0.53 0.32 -0.31
111 AT5G52070 Agenet domain-containing protein -0.53 0.34 -0.31
112 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 -0.52 0.28 -0.32
113 AT4G27820 beta glucosidase 9 beta glucosidase 9 -0.52 0.31 -0.32
114 AT4G19130 Replication factor-A protein 1-related -0.52 0.31 -0.3
115 AT2G47670 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.51 0.3 -0.32
116 AT5G15360 unknown protein; Has 4 Blast hits to 4 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.51 0.32 -0.31
117 AT3G42420 transposable element gene -0.5 0.3 -0.34
118 AT1G76370 Protein kinase superfamily protein -0.5 0.31 -0.31
119 AT3G50660 Cytochrome P450 superfamily protein CLOMAZONE-RESISTANT, CYTOCHROME
P450 90B1, DWARF 4, PARTIALLY
SUPPRESSING COI1 INSENSITIVITY TO
JA 1, SHADE AVOIDANCE 1,
SUPPRESSOR OF NPH4 2		 -0.49 0.31 -0.32
120 AT1G33340 ENTH/ANTH/VHS superfamily protein -0.49 0.31 -0.32
121 AT5G46000 Mannose-binding lectin superfamily protein -0.48 0.33 -0.3
122 AT4G17990 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits
to 131 proteins in 2 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.48 0.33 -0.33
123 AT4G26220 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 -0.48 0.31 -0.32
124 AT5G60610 F-box/RNI-like superfamily protein -0.47 0.31 -0.32
125 AT4G36480 long-chain base1 long-chain base1, EMBRYO DEFECTIVE
2779, FUMONISIN B1 RESISTANT 11,
long-chain base1		 -0.47 0.3 -0.31
126 AT4G33410 SIGNAL PEPTIDE PEPTIDASE-LIKE 1 SIGNAL PEPTIDE PEPTIDASE-LIKE 1,
SIGNAL PEPTIDE PEPTIDASE-LIKE 1		 -0.46 0.3 -0.33
127 AT3G07650 CONSTANS-like 9 CONSTANS-like 9 -0.46 0.34 -0.33
128 AT2G02650 Ribonuclease H-like superfamily protein -0.46 0.31 -0.32
129 AT1G55560 SKU5 similar 14 SKU5 similar 14 -0.45 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
130 C0038 5-(Methylthio)pentylglucosinolate - 5-Methylthiopentylglucosinolate glucosinolate biosynthesis from trihomomethionine 0.92 0.42 -0.46 C0038
131 C0033 4-(Methylsulfinyl)butylglucosinolate - 4-Methylsulfinylbutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.92 0.49 -0.48 C0033
132 C0183 MST_3033.1 - - - 0.82 0.47 -0.46
133 C0244 Sucrose D-Sucrose Sucrose stachyose biosynthesis,
fructan degradation,
stachyose degradation,
galactose degradation III,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
sucrose degradation III,
UDP-glucose biosynthesis (from sucrose),
ajugose biosynthesis II (galactinol-independent),
sucrose biosynthesis I 		0.68 0.34 -0.29 C0244
134 C0034 4-Methylthio-n-butylglucosinolate - 4-Methylthiobutyl glucosinolate glucosinolate biosynthesis from dihomomethionine 0.68 0.3 -0.32 C0034
135 C0037 5-Methylsulfinyl-n-pentylglucosinolate - 5-Methylsulfinylpentyl glucosinolate glucosinolate biosynthesis from trihomomethionine 0.59 0.3 -0.29 C0037