AGICode | AT1G59830 |
Description | protein phosphatase 2A-2 |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT1G59830 | protein phosphatase 2A-2 | protein phosphatase 2A-2 | 1 | 0.31 | -0.31 | ||
2 | AT1G47250 | 20S proteasome alpha subunit F2 | 20S proteasome alpha subunit F2 | 0.75 | 0.31 | -0.31 | ||
3 | AT1G70060 | SIN3-like 4 | SIN3-like 4 | 0.75 | 0.31 | -0.32 | ||
4 | AT5G03340 | ATPase, AAA-type, CDC48 protein | 0.72 | 0.31 | -0.31 | |||
5 | AT5G20570 | RING-box 1 | RING-BOX 1, HRT1, RING-box 1, REGULATOR OF CULLINS-1 |
0.72 | 0.31 | -0.32 | ||
6 | AT5G11010 | Pre-mRNA cleavage complex II protein family | 0.72 | 0.33 | -0.31 | |||
7 | AT2G40620 | Basic-leucine zipper (bZIP) transcription factor family protein |
0.71 | 0.31 | -0.31 | |||
8 | AT4G36020 | cold shock domain protein 1 | cold shock domain protein 1 | 0.71 | 0.32 | -0.31 | ||
9 | AT3G57360 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02370.2); Has 122 Blast hits to 122 proteins in 54 species: Archae - 0; Bacteria - 0; Metazoa - 74; Fungi - 4; Plants - 41; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
0.71 | 0.33 | -0.33 | |||
10 | AT5G16320 | FRIGIDA like 1 | FRIGIDA like 1 | 0.71 | 0.3 | -0.34 | ||
11 | AT4G08420 | transposable element gene | 0.7 | 0.32 | -0.3 | |||
12 | AT3G62330 | Zinc knuckle (CCHC-type) family protein | -0.7 | 0.32 | -0.31 | |||
13 | AT4G01790 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.7 | 0.31 | -0.3 | |||
14 | AT1G62150 | Mitochondrial transcription termination factor family protein |
0.7 | 0.3 | -0.32 | |||
15 | AT4G39220 | Rer1 family protein | ATRER1A | 0.7 | 0.31 | -0.32 | ||
16 | AT5G27820 | Ribosomal L18p/L5e family protein | 0.7 | 0.31 | -0.33 | |||
17 | AT3G13520 | arabinogalactan protein 12 | arabinogalactan protein 12, ATAGP12 |
0.7 | 0.3 | -0.32 | ||
18 | AT1G68370 | Chaperone DnaJ-domain superfamily protein | ALTERED RESPONSE TO GRAVITY 1 | 0.7 | 0.32 | -0.33 | ||
19 | AT1G33230 | TMPIT-like protein | 0.7 | 0.32 | -0.31 | |||
20 | AT5G52200 | phosphoprotein phosphatase inhibitors | AtI-2, inhibitor-2 | 0.7 | 0.3 | -0.28 | ||
21 | AT3G09410 | Pectinacetylesterase family protein | -0.7 | 0.31 | -0.35 | |||
22 | AT5G54750 | Transport protein particle (TRAPP) component | 0.7 | 0.31 | -0.31 | |||
23 | AT4G37190 | LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Beta tubulin, autoregulation binding site (InterPro:IPR013838), Misato Segment II, myosin-like (InterPro:IPR019605), Tubulin/FtsZ, N-terminal (InterPro:IPR019746); Has 345 Blast hits to 341 proteins in 161 species: Archae - 0; Bacteria - 0; Metazoa - 131; Fungi - 140; Plants - 55; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink). |
0.69 | 0.3 | -0.32 | |||
24 | AT5G01340 | Mitochondrial substrate carrier family protein | AtmSFC1, mitochondrial succinate-fumarate carrier 1 |
0.69 | 0.31 | -0.31 | ||
25 | AT4G25550 | Cleavage/polyadenylation specificity factor, 25kDa subunit | 0.69 | 0.3 | -0.34 | |||
26 | AT3G54170 | FKBP12 interacting protein 37 | FKBP12 interacting protein 37, FKBP12 interacting protein 37 |
0.69 | 0.33 | -0.31 | ||
27 | AT3G53260 | phenylalanine ammonia-lyase 2 | ATPAL2, phenylalanine ammonia-lyase 2 |
0.69 | 0.33 | -0.32 | ||
28 | AT5G18400 | Cytokine-induced anti-apoptosis inhibitor 1, Fe-S biogenesis |
0.69 | 0.31 | -0.32 | |||
29 | AT5G05750 | DNAJ heat shock N-terminal domain-containing protein | 0.68 | 0.3 | -0.33 | |||
30 | AT4G23040 | Ubiquitin-like superfamily protein | 0.68 | 0.31 | -0.3 | |||
31 | AT2G27350 | OTU-like cysteine protease family protein | otubain-like deubiquitinase 1 | -0.68 | 0.31 | -0.3 | ||
32 | AT3G55600 | Membrane fusion protein Use1 | 0.68 | 0.3 | -0.31 | |||
33 | AT1G50950 | Thioredoxin protein with domain of unknown function (DUF1692) |
-0.68 | 0.3 | -0.31 | |||
34 | AT1G30480 | D111/G-patch domain-containing protein | DNA-DAMAGE-REPAIR/TOLERATION PROTEIN 111 |
0.68 | 0.31 | -0.32 | ||
35 | AT1G52840 | transposable element gene | 0.67 | 0.34 | -0.32 | |||
36 | AT3G56700 | fatty acid reductase 6 | AtFAR6, fatty acid reductase 6 | 0.67 | 0.31 | -0.34 | ||
37 | AT1G13560 | aminoalcoholphosphotransferase 1 | aminoalcoholphosphotransferase 1, ATAAPT1 |
0.67 | 0.33 | -0.32 | ||
38 | AT4G14690 | Chlorophyll A-B binding family protein | EARLY LIGHT-INDUCIBLE PROTEIN 2 | 0.67 | 0.31 | -0.32 | ||
39 | AT1G18970 | germin-like protein 4 | germin-like protein 4 | 0.67 | 0.3 | -0.3 | ||
40 | AT5G06700 | Plant protein of unknown function (DUF828) | TBR, TRICHOME BIREFRINGENCE | 0.67 | 0.32 | -0.33 | ||
41 | AT5G36910 | thionin 2.2 | thionin 2.2 | 0.66 | 0.3 | -0.31 | ||
42 | AT5G05270 | Chalcone-flavanone isomerase family protein | 0.66 | 0.32 | -0.32 | |||
43 | AT4G03480 | Ankyrin repeat family protein | 0.66 | 0.31 | -0.32 | |||
44 | AT5G20180 | Ribosomal protein L36 | 0.66 | 0.31 | -0.33 | |||
45 | AT1G27820 | Polynucleotidyl transferase, ribonuclease H-like superfamily protein |
0.66 | 0.32 | -0.31 | |||
46 | AT3G13065 | STRUBBELIG-receptor family 4 | STRUBBELIG-receptor family 4 | -0.65 | 0.32 | -0.31 | ||
47 | AT5G25370 | phospholipase D alpha 3 | phospholipase D alpha 3 | 0.65 | 0.32 | -0.32 | ||
48 | AT5G49820 | Protein of unknown function, DUF647 | ROOT UV-B SENSITIVE 6 | 0.65 | 0.32 | -0.33 | ||
49 | AT5G03230 | Protein of unknown function, DUF584 | -0.65 | 0.32 | -0.3 | |||
50 | AT4G16515 | Encodes a root meristem growth factor (RGF). Belongs to a family of functionally redundant homologous peptides that are secreted, tyrosine-sulfated, and expressed mainly in the stem cell area and the innermost layer of central columella cells. RGFs are required for maintenance of the root stem cell niche and transit amplifying cell proliferation. Members of this family include: At5g60810 (RGF1), At1g13620 (RGF2), At2g04025 (RGF3), At3g30350 (RGF4), At5g51451 (RGF5), At4g16515 (RGF6), At3g02240 (RGF7), At2g03830 (RGF8) and At5g64770 (RGF9). |
root meristem growth factor 6 | 0.65 | 0.29 | -0.34 | ||
51 | AT1G43170 | ribosomal protein 1 | ribosomal protein 1, embryo defective 2207, ribosomal protein 1, RPL3A |
0.65 | 0.31 | -0.33 | ||
52 | AT5G36230 | ARM repeat superfamily protein | 0.64 | 0.32 | -0.31 | |||
53 | AT5G27950 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.64 | 0.32 | -0.3 | |||
54 | AT4G39780 | Integrase-type DNA-binding superfamily protein | -0.64 | 0.3 | -0.34 | |||
55 | AT4G04950 | thioredoxin family protein | Arabidopsis thaliana monothiol glutaredoxin 17, monothiol glutaredoxin 17 |
0.64 | 0.31 | -0.31 | ||
56 | AT1G12650 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF947 (InterPro:IPR009292); Has 700 Blast hits to 631 proteins in 192 species: Archae - 0; Bacteria - 32; Metazoa - 138; Fungi - 168; Plants - 60; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink). |
0.64 | 0.31 | -0.32 | |||
57 | AT2G28960 | Leucine-rich repeat protein kinase family protein | 0.63 | 0.32 | -0.32 | |||
58 | AT1G02960 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G02965.1); Has 83 Blast hits to 82 proteins in 37 species: Archae - 0; Bacteria - 2; Metazoa - 20; Fungi - 7; Plants - 29; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). |
-0.63 | 0.32 | -0.31 | |||
59 | AT1G35183 | unknown protein; Has 5 Blast hits to 5 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 5; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.31 | -0.33 | |||
60 | AT3G20810 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
Jumonji C domain-containing protein 30, jumonji domain containing 5 |
-0.63 | 0.32 | -0.32 | ||
61 | AT4G30900 | DNAse I-like superfamily protein | -0.63 | 0.31 | -0.32 | |||
62 | AT3G32100 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 1 Blast hits to 1 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 1; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.63 | 0.33 | -0.32 | |||
63 | AT1G73970 | unknown protein; Has 34 Blast hits to 33 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
-0.62 | 0.31 | -0.31 | |||
64 | AT5G61250 | glucuronidase 1 | glucuronidase 1, glucuronidase 1 | -0.62 | 0.3 | -0.31 | ||
65 | AT5G29000 | Homeodomain-like superfamily protein | PHR1-like 1 | -0.62 | 0.35 | -0.31 | ||
66 | AT3G59100 | glucan synthase-like 11 | glucan synthase-like 11, gsl11, glucan synthase-like 11 |
-0.62 | 0.33 | -0.31 | ||
67 | AT2G01680 | Ankyrin repeat family protein | -0.61 | 0.3 | -0.3 | |||
68 | AT5G51970 | GroES-like zinc-binding alcohol dehydrogenase family protein |
-0.61 | 0.3 | -0.31 | |||
69 | AT4G14920 | Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein |
-0.61 | 0.32 | -0.3 | |||
70 | AT2G19250 | pseudogene, similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco), similar to SP|O24133 Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) {Nicotiana tabacum}; blastp match of 78% identity and 5.0e-07 P-value to SP|O24133|CHLD_TOBAC Magnesium-chelatase subunit chlD, chloroplast precursor (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D). (Common tobacco) {Nicotiana tabacum} |
-0.61 | 0.32 | -0.32 | |||
71 | AT5G38780 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.6 | 0.31 | -0.32 | |||
72 | AT1G80790 | XH/XS domain-containing protein | factor of DNA methylation 5 | -0.6 | 0.31 | -0.3 | ||
73 | AT4G34030 | 3-methylcrotonyl-CoA carboxylase | 3-methylcrotonyl-CoA carboxylase | -0.59 | 0.3 | -0.31 | ||
74 | AT5G18940 | Mo25 family protein | -0.59 | 0.34 | -0.32 | |||
75 | AT1G68530 | 3-ketoacyl-CoA synthase 6 | ECERIFERUM 6, CUTICULAR 1, G2, 3-ketoacyl-CoA synthase 6, POLLEN-PISTIL INCOMPATIBILITY 1 |
-0.59 | 0.34 | -0.31 | ||
76 | AT4G24740 | FUS3-complementing gene 2 | FUS3-complementing gene 2, AME1, FUS3-complementing gene 2 |
-0.59 | 0.28 | -0.33 | ||
77 | AT3G43130 | transposable element gene | -0.59 | 0.29 | -0.33 | |||
78 | AT1G31820 | Amino acid permease family protein | -0.59 | 0.32 | -0.33 | |||
79 | AT3G12950 | Trypsin family protein | -0.58 | 0.33 | -0.31 | |||
80 | AT4G20200 | Terpenoid cyclases/Protein prenyltransferases superfamily protein |
-0.58 | 0.31 | -0.33 | |||
81 | AT2G25000 | WRKY DNA-binding protein 60 | ATWRKY60, WRKY DNA-binding protein 60 |
-0.58 | 0.33 | -0.29 | ||
82 | AT5G47560 | tonoplast dicarboxylate transporter | ATSDAT, TONOPLAST DICARBOXYLATE TRANSPORTER, tonoplast dicarboxylate transporter |
-0.58 | 0.32 | -0.32 | ||
83 | AT5G57790 | unknown protein; Has 13 Blast hits to 11 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.58 | 0.29 | -0.34 | |||
84 | AT5G23570 | XS domain-containing protein / XS zinc finger domain-containing protein-related |
SUPPRESSOR OF GENE SILENCING 3, SUPPRESSOR OF GENE SILENCING 3 |
-0.57 | 0.3 | -0.33 | ||
85 | AT1G54040 | epithiospecifier protein | epithiospecifier protein, EPITHIOSPECIFYING SENESCENCE REGULATOR, TASTY |
-0.56 | 0.31 | -0.35 | ||
86 | AT5G22470 | NAD+ ADP-ribosyltransferases;NAD+ ADP-ribosyltransferases | -0.56 | 0.32 | -0.31 | |||
87 | AT5G40890 | chloride channel A | chloride channel A, ATCLCA, chloride channel A, CHLORIDE CHANNEL-A, CHLORIDE CHANNEL A |
-0.56 | 0.3 | -0.31 | ||
88 | AT1G69720 | heme oxygenase 3 | heme oxygenase 3 | -0.56 | 0.31 | -0.33 | ||
89 | AT1G17600 | Disease resistance protein (TIR-NBS-LRR class) family | -0.56 | 0.3 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
90 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
-0.57 | 0.32 | -0.28 |