AT1G03100 : -
Query Information
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AGICode AT1G03100
Description Pentatricopeptide repeat (PPR) superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03100 Pentatricopeptide repeat (PPR) superfamily protein 1 0.31 -0.32
2 AT2G07070 transposable element gene 0.8 0.33 -0.32
3 AT2G31100 alpha/beta-Hydrolases superfamily protein 0.77 0.31 -0.29
4 AT3G21800 UDP-glucosyl transferase 71B8 UDP-glucosyl transferase 71B8 0.77 0.32 -0.3
5 AT3G46860 Serine protease inhibitor, potato inhibitor I-type family
protein		 0.77 0.32 -0.31
6 AT5G57720 AP2/B3-like transcriptional factor family protein 0.77 0.3 -0.34
7 AT2G13940 transposable element gene 0.76 0.31 -0.32
8 AT3G42960 TAPETUM 1 ASD, TAPETUM 1, TAPETUM1 0.76 0.31 -0.32
9 AT4G35370 Transducin/WD40 repeat-like superfamily protein 0.76 0.3 -0.31
10 AT3G53940 Mitochondrial substrate carrier family protein 0.76 0.31 -0.3
11 AT5G24230 Lipase class 3-related protein 0.76 0.3 -0.3
12 AT1G44770 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G49710.3); Has 81 Blast hits
to 81 proteins in 17 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 81; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.75 0.31 -0.31
13 AT5G36950 DegP protease 10 DegP protease 10 0.75 0.33 -0.3
14 AT5G30380 transposable element gene 0.74 0.31 -0.3
15 AT5G15110 Pectate lyase family protein 0.74 0.32 -0.32
16 AT1G69990 Leucine-rich repeat protein kinase family protein 0.74 0.34 -0.33
17 AT2G24320 alpha/beta-Hydrolases superfamily protein 0.74 0.3 -0.33
18 AT3G31915 transposable element gene -0.74 0.32 -0.3
19 AT1G16950 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: stamen; EXPRESSED
DURING: 4 anthesis; Has 17 Blast hits to 17 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.73 0.33 -0.32
20 AT2G15750 transposable element gene 0.73 0.3 -0.31
21 AT2G11360 transposable element gene 0.72 0.3 -0.29
22 AT5G57420 indole-3-acetic acid inducible 33 indole-3-acetic acid inducible 33 0.72 0.33 -0.31
23 AT5G39620 RAB GTPase homolog G1 RAB GTPase homolog G1, RAB GTPase
homolog G1		 0.72 0.31 -0.31
24 AT3G16890 pentatricopeptide (PPR) domain protein 40 pentatricopeptide (PPR) domain
protein 40		 0.72 0.34 -0.32
25 AT1G55300 TBP-associated factor 7 TBP-associated factor 7 -0.71 0.31 -0.33
26 AT1G78470 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G67390.1); Has 40 Blast hits to 40
proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).		 0.71 0.32 -0.31
27 AT1G21340 Dof-type zinc finger DNA-binding family protein 0.71 0.33 -0.33
28 AT1G30710 FAD-binding Berberine family protein -0.71 0.3 -0.36
29 AT1G68480 C2H2 and C2HC zinc fingers superfamily protein JAGGED 0.7 0.32 -0.31
30 AT4G13060 F-box associated ubiquitination effector family protein 0.7 0.32 -0.32
31 AT1G48095 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G36960.1); Has 82 Blast hits
to 82 proteins in 3 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.7 0.32 -0.3
32 AT1G18220 purine permease 9 purine permease 9, purine permease
9		 0.7 0.31 -0.32
33 AT1G30350 Pectin lyase-like superfamily protein 0.7 0.35 -0.32
34 AT3G42850 Mevalonate/galactokinase family protein 0.69 0.31 -0.3
35 AT4G20410 gamma-soluble NSF attachment protein GAMMA-SOLUBLE NSF ATTACHMENT
PROTEIN, gamma-soluble NSF
attachment protein		 -0.69 0.33 -0.3
36 AT3G49710 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.3 -0.35
37 AT3G25280 Major facilitator superfamily protein 0.69 0.32 -0.28
38 AT5G13150 exocyst subunit exo70 family protein C1 exocyst subunit exo70 family
protein C1, exocyst subunit exo70
family protein C1		 0.69 0.31 -0.31
39 AT4G05280 transposable element gene 0.69 0.33 -0.34
40 AT4G37170 Pentatricopeptide repeat (PPR) superfamily protein 0.69 0.31 -0.3
41 AT4G25770 alpha/beta-Hydrolases superfamily protein -0.69 0.33 -0.3
42 AT5G59680 Leucine-rich repeat protein kinase family protein 0.69 0.29 -0.33
43 AT1G16480 Tetratricopeptide repeat (TPR)-like superfamily protein 0.69 0.32 -0.3
44 AT1G50910 unknown protein; Has 1105 Blast hits to 802 proteins in 217
species: Archae - 2; Bacteria - 177; Metazoa - 445; Fungi -
210; Plants - 58; Viruses - 6; Other Eukaryotes - 207
(source: NCBI BLink).		 0.68 0.29 -0.31
45 AT3G47850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 12 growth stages; Has 57 Blast hits to 57 proteins
in 32 species: Archae - 0; Bacteria - 5; Metazoa - 12;
Fungi - 4; Plants - 29; Viruses - 0; Other Eukaryotes - 7
(source: NCBI BLink).		 -0.68 0.31 -0.33
46 AT4G13420 high affinity K+ transporter 5 ARABIDOPSIS THALIANA HIGH AFFINITY
K+ TRANSPORTER 5, high affinity K+
transporter 5		 0.68 0.33 -0.33
47 AT1G49150 unknown protein; Has 6 Blast hits to 6 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 6; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.68 0.31 -0.31
48 AT1G27160 valyl-tRNA synthetase / valine--tRNA ligase-related -0.68 0.3 -0.33
49 AT2G14020 transposable element gene 0.68 0.33 -0.35
50 AT1G62700 Arabidopsis NAC domain containing protein 26 Arabidopsis NAC domain containing
protein 26, VASCULAR RELATED
NAC-DOMAIN PROTEIN 5		 -0.68 0.32 -0.32
51 AT1G71420 Tetratricopeptide repeat (TPR)-like superfamily protein 0.67 0.31 -0.31
52 AT2G11650 transposable element gene 0.67 0.32 -0.31
53 AT5G44850 Protein with RNI-like/FBD-like domains 0.67 0.33 -0.32
54 AT1G14020 O-fucosyltransferase family protein 0.67 0.3 -0.31
55 AT2G37510 RNA-binding (RRM/RBD/RNP motifs) family protein 0.67 0.32 -0.32
56 AT4G05500 pseudogene, F-box protein family, AtFBL9/AtFBL23, contains
similarity to N7 protein GI:3273101 from (Medicago
truncatula); blastp match of 39% identity and 1.6e-34
P-value to GP|3273101|emb|CAA76808.1||Y17613 N7 protein
{Medicago truncatula}		 0.67 0.31 -0.3
57 AT2G19640 ASH1-related protein 2 ASH1-related 2, SET DOMAIN PROTEIN
39		 0.67 0.32 -0.32
58 AT2G30120 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G14750.1); Has 275 Blast hits
to 241 proteins in 42 species: Archae - 4; Bacteria - 15;
Metazoa - 15; Fungi - 4; Plants - 188; Viruses - 0; Other
Eukaryotes - 49 (source: NCBI BLink).		 -0.67 0.33 -0.32
59 AT5G02310 proteolysis 6 proteolysis 6 -0.67 0.33 -0.29
60 AT3G53820 C2H2 and C2HC zinc fingers superfamily protein 0.67 0.3 -0.3
61 AT4G10730 Protein kinase superfamily protein -0.67 0.31 -0.31
62 AT2G13510 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G13500.1); Has 136 Blast hits
to 116 proteins in 8 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 136; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.67 0.33 -0.33
63 AT5G51520 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 0.67 0.3 -0.3
64 AT5G58050 SHV3-like 4 Glycerophosphodiester
phosphodiesterase (GDPD) like 6,
SHV3-like 4		 0.67 0.3 -0.32
65 AT2G18820 transposable element gene 0.66 0.31 -0.29
66 AT1G12450 SNARE associated Golgi protein family -0.66 0.35 -0.32
67 AT2G21710 Mitochondrial transcription termination factor family
protein		 embryo defective 2219 0.66 0.31 -0.34
68 AT5G41180 leucine-rich repeat transmembrane protein kinase family
protein		 0.66 0.31 -0.3
69 AT4G37220 Cold acclimation protein WCOR413 family -0.66 0.33 -0.31
70 AT2G06120 transposable element gene 0.66 0.32 -0.32
71 AT1G11190 bifunctional nuclease i bifunctional nuclease i,
ENDONUCLEASE 1		 -0.66 0.34 -0.33
72 AT5G38260 Protein kinase superfamily protein 0.66 0.32 -0.33
73 AT1G19230 Riboflavin synthase-like superfamily protein -0.66 0.31 -0.34
74 AT1G08110 lactoylglutathione lyase family protein / glyoxalase I
family protein		 -0.66 0.32 -0.31
75 AT1G45976 S-ribonuclease binding protein 1 S-ribonuclease binding protein 1 -0.66 0.33 -0.31
76 AT1G36600 transposable element gene 0.66 0.31 -0.31
77 AT5G58150 Leucine-rich repeat protein kinase family protein 0.66 0.31 -0.34
78 AT5G61500 autophagy 3 (APG3) ATATG3, ATG3 -0.66 0.33 -0.31
79 AT2G16010 transposable element gene -0.65 0.33 -0.3
80 AT5G47260 ATP binding;GTP binding;nucleotide
binding;nucleoside-triphosphatases		 -0.65 0.33 -0.3
81 AT1G26300 BSD domain-containing protein -0.65 0.32 -0.32
82 AT1G61370 S-locus lectin protein kinase family protein 0.65 0.32 -0.3
83 AT4G10330 glycine-rich protein -0.65 0.33 -0.33
84 AT5G64905 elicitor peptide 3 precursor elicitor peptide 3 precursor 0.65 0.32 -0.32
85 AT1G76870 BEST Arabidopsis thaliana protein match is:
sequence-specific DNA binding transcription factors
(TAIR:AT1G21200.1); Has 406 Blast hits to 351 proteins in
76 species: Archae - 0; Bacteria - 2; Metazoa - 137; Fungi
- 14; Plants - 127; Viruses - 0; Other Eukaryotes - 126
(source: NCBI BLink).		 0.65 0.34 -0.32
86 AT5G49620 myb domain protein 78 myb domain protein 78, myb domain
protein 78		 -0.65 0.33 -0.31
87 AT3G12250 TGACG motif-binding factor 6 BZIP45, TGACG motif-binding factor
6		 -0.65 0.3 -0.32
88 AT1G23750 Nucleic acid-binding, OB-fold-like protein -0.64 0.31 -0.31
89 AT1G30010 Intron maturase, type II family protein 0.64 0.33 -0.33
90 AT3G47160 RING/U-box superfamily protein -0.64 0.31 -0.3
91 AT2G03260 EXS (ERD1/XPR1/SYG1) family protein 0.64 0.31 -0.3
92 AT1G65130 Ubiquitin carboxyl-terminal hydrolase-related protein -0.64 0.33 -0.31
93 AT1G63120 RHOMBOID-like 2 RHOMBOID-like 2, RHOMBOID-like 2 -0.64 0.32 -0.31
94 AT5G35640 Putative endonuclease or glycosyl hydrolase 0.64 0.31 -0.3
95 AT4G35500 Protein kinase superfamily protein 0.64 0.31 -0.32
96 AT1G20850 xylem cysteine peptidase 2 xylem cysteine peptidase 2 -0.64 0.32 -0.32
97 AT3G29796 unknown protein; Has 28 Blast hits to 20 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 18; Fungi - 0;
Plants - 1; Viruses - 0; Other Eukaryotes - 9 (source: NCBI
BLink).		 0.64 0.28 -0.31
98 AT2G27140 HSP20-like chaperones superfamily protein -0.64 0.31 -0.34
99 AT3G09530 exocyst subunit exo70 family protein H3 exocyst subunit exo70 family
protein H3, exocyst subunit exo70
family protein H3		 0.64 0.32 -0.32
100 AT4G38390 root hair specific 17 root hair specific 17 0.64 0.31 -0.3
101 AT4G04050 transposable element gene 0.64 0.33 -0.29
102 AT5G40520 unknown protein; Has 3679 Blast hits to 2474 proteins in
390 species: Archae - 10; Bacteria - 571; Metazoa - 1012;
Fungi - 528; Plants - 214; Viruses - 74; Other Eukaryotes -
1270 (source: NCBI BLink).		 0.64 0.34 -0.31
103 AT2G27960 cyclin-dependent kinase-subunit 1 cyclin-dependent kinase-subunit 1,
CKS1AT		 -0.64 0.32 -0.31
104 AT3G26870 Plant self-incompatibility protein S1 family 0.64 0.3 -0.32
105 AT4G27690 vacuolar protein sorting 26B vacuolar protein sorting 26B -0.63 0.3 -0.32
106 AT4G07920 transposable element gene -0.63 0.32 -0.33
107 AT5G09630 LisH/CRA/RING-U-box domains-containing protein -0.63 0.33 -0.32
108 AT3G62020 germin-like protein 10 germin-like protein 10 -0.63 0.31 -0.31
109 AT5G41340 ubiquitin conjugating enzyme 4 UBIQUITIN CONJUGATING ENZYME 4,
ubiquitin conjugating enzyme 4		 -0.63 0.31 -0.28
110 AT1G58070 unknown protein; Has 286 Blast hits to 266 proteins in 81
species: Archae - 2; Bacteria - 25; Metazoa - 90; Fungi -
19; Plants - 78; Viruses - 4; Other Eukaryotes - 68
(source: NCBI BLink).		 -0.62 0.28 -0.32
111 AT2G26430 arginine-rich cyclin 1 ARGININE-RICH CYCLIN 1,
arginine-rich cyclin 1		 -0.61 0.32 -0.32
112 AT1G23070 Protein of unknown function (DUF300) -0.61 0.35 -0.32
113 AT3G29660 transposable element gene -0.61 0.31 -0.3
114 AT1G20750 RAD3-like DNA-binding helicase protein -0.6 0.29 -0.32
115 AT3G14950 tetratricopetide-repeat thioredoxin-like 2 tetratricopetide-repeat
thioredoxin-like 2		 -0.6 0.31 -0.3
116 AT5G45970 RAC-like 2 Arabidopsis RAC-like 2,
ARABIDOPSIS THALIANA RAC 2,
RHO-RELATED PROTEIN FROM PLANTS 7,
RAC-like 2, ROP7		 -0.6 0.32 -0.34
117 AT4G12530 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 -0.6 0.34 -0.32
118 AT5G39660 cycling DOF factor 2 cycling DOF factor 2 -0.59 0.3 -0.34
119 AT1G02550 Plant invertase/pectin methylesterase inhibitor superfamily
protein		 -0.59 0.32 -0.33
120 AT4G35350 xylem cysteine peptidase 1 xylem cysteine peptidase 1 -0.59 0.31 -0.31
121 AT4G32560 paramyosin-related -0.59 0.3 -0.31
122 AT3G51770 tetratricopeptide repeat (TPR)-containing protein ARABIDOPSIS ETHYLENE OVERPRODUCER
1, ETHYLENE OVERPRODUCER 1		 -0.59 0.31 -0.33
123 AT4G11400 ARID/BRIGHT DNA-binding domain;ELM2 domain protein -0.59 0.31 -0.31
124 AT1G14530 Protein of unknown function (DUF1084) TOM THREE HOMOLOG 1 -0.59 0.34 -0.29
125 AT1G33910 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 -0.59 0.31 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
126 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.68 0.43 -0.45 C0053