AT1G55810 : uridine kinase-like 3
Query Information
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AGICode AT1G55810
Description uridine kinase-like 3
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G55810 uridine kinase-like 3 uridine kinase-like 3 1 0.33 -0.32
2 AT2G24580 FAD-dependent oxidoreductase family protein 0.79 0.32 -0.35
3 AT4G21410 cysteine-rich RLK (RECEPTOR-like protein kinase) 29 cysteine-rich RLK (RECEPTOR-like
protein kinase) 29		 0.77 0.3 -0.32
4 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.76 0.31 -0.31
5 AT1G53760 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plasma membrane, plastid, membrane;
EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF2343 (InterPro:IPR018786); Has 171
Blast hits to 171 proteins in 90 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 127; Plants - 41;
Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).		 0.76 0.32 -0.32
6 AT2G30970 aspartate aminotransferase 1 aspartate aminotransferase 1 0.76 0.28 -0.32
7 AT2G04795 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G35732.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.75 0.3 -0.34
8 AT5G65430 general regulatory factor 8 14-3-3 PROTEIN G-BOX FACTOR14
KAPPA, GF14 KAPPA, general
regulatory factor 8		 0.74 0.33 -0.32
9 AT1G02860 SPX (SYG1/Pho81/XPR1) domain-containing protein BENZOIC ACID HYPERSENSITIVE 1,
nitrogen limitation adaptation		 0.74 0.33 -0.31
10 AT1G13300 myb-like transcription factor family protein HYPERSENSITIVITY TO LOW
PI-ELICITED PRIMARY ROOT
SHORTENING 1		 0.74 0.3 -0.32
11 AT4G18270 translocase 11 ARABIDOPSIS THALIANA TRANSLOCASE
11, translocase 11		 -0.74 0.32 -0.3
12 AT4G19410 Pectinacetylesterase family protein 0.74 0.3 -0.31
13 AT2G43140 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.73 0.28 -0.33
14 AT5G05440 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1-LIKE 5,
regulatory component of ABA
receptor 8		 0.73 0.35 -0.29
15 AT5G13420 Aldolase-type TIM barrel family protein 0.73 0.32 -0.3
16 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.73 0.31 -0.31
17 AT1G14210 Ribonuclease T2 family protein 0.73 0.33 -0.31
18 AT5G14640 shaggy-like kinase 13 SHAGGY-LIKE KINASE 13, shaggy-like
kinase 13		 -0.72 0.3 -0.33
19 AT1G77840 Translation initiation factor IF2/IF5 0.72 0.3 -0.29
20 AT3G27190 uridine kinase-like 2 uridine kinase-like 2 0.72 0.3 -0.34
21 AT5G16470 zinc finger (C2H2 type) family protein 0.71 0.32 -0.3
22 AT3G16350 Homeodomain-like superfamily protein 0.71 0.3 -0.3
23 AT1G15320 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: flower; EXPRESSED
DURING: petal differentiation and expansion stage; Has 62
Blast hits to 62 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).		 -0.7 0.33 -0.32
24 AT5G19180 E1 C-terminal related 1 E1 C-terminal related 1 0.7 0.29 -0.31
25 AT1G65930 cytosolic NADP+-dependent isocitrate dehydrogenase cytosolic NADP+-dependent
isocitrate dehydrogenase		 0.7 0.33 -0.33
26 AT2G36390 starch branching enzyme 2.1 BRANCHING ENZYME 3, starch
branching enzyme 2.1		 -0.7 0.32 -0.3
27 AT5G56360 calmodulin-binding protein PRIORITY IN SWEET LIFE 4 0.7 0.3 -0.31
28 AT4G20840 FAD-binding Berberine family protein 0.69 0.32 -0.33
29 AT3G18510 unknown protein; Has 15 Blast hits to 15 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.69 0.31 -0.32
30 AT4G17070 peptidyl-prolyl cis-trans isomerases 0.69 0.31 -0.33
31 AT4G15700 Thioredoxin superfamily protein 0.69 0.31 -0.33
32 AT2G39660 botrytis-induced kinase1 botrytis-induced kinase1 0.69 0.33 -0.33
33 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14		 -0.69 0.33 -0.3
34 AT4G02630 Protein kinase superfamily protein -0.69 0.31 -0.3
35 AT3G43430 RING/U-box superfamily protein 0.69 0.3 -0.35
36 AT2G33470 glycolipid transfer protein 1 ARABIDOPSIS GLYCOLIPID TRANSFER
PROTEIN 1, glycolipid transfer
protein 1		 0.68 0.31 -0.31
37 AT3G29810 COBRA-like protein 2 precursor COBRA-like protein 2 precursor 0.68 0.3 -0.31
38 AT5G66320 GATA transcription factor 5 GATA transcription factor 5 -0.68 0.35 -0.31
39 AT4G32690 hemoglobin 3 ARABIDOPSIS HEMOGLOBIN 3,
hemoglobin 3		 0.68 0.32 -0.32
40 AT1G56600 galactinol synthase 2 galactinol synthase 2, galactinol
synthase 2		 -0.68 0.3 -0.3
41 AT4G17870 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 PYRABACTIN RESISTANCE 1,
regulatory component of ABA
receptor 11		 0.68 0.34 -0.29
42 AT2G06000 Pentatricopeptide repeat (PPR) superfamily protein 0.68 0.32 -0.33
43 AT1G72430 SAUR-like auxin-responsive protein family 0.68 0.31 -0.34
44 AT4G27730 oligopeptide transporter 1 ARABIDOPSIS THALIANA OLIGOPEPTIDE
TRANSPORTER 6, oligopeptide
transporter 1		 0.67 0.33 -0.27
45 AT5G40640 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
19 plant structures; EXPRESSED DURING: 7 growth stages;
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G27390.1); Has 104 Blast hits to 102 proteins in
14 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi -
0; Plants - 101; Viruses - 0; Other Eukaryotes - 1 (source:
NCBI BLink).		 -0.67 0.34 -0.29
46 AT3G45900 Ribonuclease P protein subunit P38-related -0.67 0.31 -0.31
47 AT1G36060 Integrase-type DNA-binding superfamily protein 0.67 0.31 -0.31
48 AT1G51540 Galactose oxidase/kelch repeat superfamily protein 0.67 0.32 -0.3
49 AT1G29395 COLD REGULATED 314 INNER MEMBRANE 1 COLD REGULATED 314 THYLAKOID
MEMBRANE 1, COLD REGULATED 314
INNER MEMBRANE 1, cold regulated
414 thylakoid membrane 1		 -0.67 0.32 -0.31
50 AT1G15040 Class I glutamine amidotransferase-like superfamily protein 0.67 0.32 -0.31
51 AT5G23020 2-isopropylmalate synthase 2 2-isopropylmalate synthase 2,
METHYLTHIOALKYMALATE
SYNTHASE-LIKE, MAM3		 0.67 0.32 -0.31
52 AT3G24760 Galactose oxidase/kelch repeat superfamily protein -0.67 0.31 -0.32
53 AT5G57610 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.67 0.29 -0.31
54 AT2G37130 Peroxidase superfamily protein 0.66 0.32 -0.3
55 AT1G07090 Protein of unknown function (DUF640) LIGHT SENSITIVE HYPOCOTYLS 6 0.66 0.31 -0.33
56 AT3G22750 Protein kinase superfamily protein 0.66 0.32 -0.31
57 AT2G17440 plant intracellular ras group-related LRR 5 plant intracellular ras
group-related LRR 5		 0.66 0.31 -0.32
58 AT3G13760 Cysteine/Histidine-rich C1 domain family protein 0.66 0.31 -0.32
59 AT2G18230 pyrophosphorylase 2 pyrophosphorylase 2,
pyrophosphorylase 2		 -0.66 0.32 -0.3
60 AT5G20990 molybdopterin biosynthesis CNX1 protein / molybdenum
cofactor biosynthesis enzyme CNX1 (CNX1)		 B73, CHLORATE RESISTANT 6,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE,
CO-FACTOR FOR NITRATE REDUCTASE
AND XANTHINE DEHYDROGENASE 1,
SIRTINOL 4		 0.66 0.3 -0.29
61 AT1G73470 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 72 Blast hits to 72 proteins
in 35 species: Archae - 0; Bacteria - 50; Metazoa - 0;
Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink).		 -0.66 0.33 -0.31
62 AT5G05430 RNA-binding protein 0.66 0.33 -0.3
63 AT3G05030 sodium hydrogen exchanger 2 ATNHX2, sodium hydrogen exchanger
2		 -0.65 0.34 -0.31
64 AT5G46450 Disease resistance protein (TIR-NBS-LRR class) family 0.65 0.32 -0.3
65 AT4G15680 Thioredoxin superfamily protein 0.65 0.3 -0.3
66 AT5G03190 conserved peptide upstream open reading frame 47 conserved peptide upstream open
reading frame 47		 -0.65 0.32 -0.31
67 AT1G21590 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 -0.65 0.32 -0.32
68 AT5G44670 Domain of unknown function (DUF23) -0.65 0.31 -0.34
69 AT5G04590 sulfite reductase sulfite reductase 0.65 0.33 -0.3
70 AT1G71880 sucrose-proton symporter 1 ARABIDOPSIS THALIANA
SUCROSE-PROTON SYMPORTER 1,
sucrose-proton symporter 1		 0.65 0.33 -0.31
71 AT5G06480 Immunoglobulin E-set superfamily protein -0.64 0.32 -0.32
72 AT3G03110 exportin 1B CRM1B, exportin 1B 0.64 0.32 -0.32
73 AT3G50570 hydroxyproline-rich glycoprotein family protein 0.64 0.33 -0.31
74 AT2G42540 cold-regulated 15a COR15, cold-regulated 15a -0.64 0.31 -0.31
75 AT4G05390 root FNR 1 root FNR 1, root FNR 1 0.64 0.32 -0.31
76 AT5G60270 Concanavalin A-like lectin protein kinase family protein 0.64 0.31 -0.34
77 AT3G22425 imidazoleglycerol-phosphate dehydratase HISN5A,
imidazoleglycerol-phosphate
dehydratase		 -0.64 0.32 -0.32
78 AT5G18830 squamosa promoter binding protein-like 7 SQUAMOSA PROMOTER BINDING
PROTEIN-LIKE 7, squamosa promoter
binding protein-like 7		 -0.64 0.32 -0.33
79 AT1G16850 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: response to salt stress; LOCATED IN:
endomembrane system; EXPRESSED IN: leaf apex, leaf whorl,
male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six
leaves visible, LP.04 four leaves visible, LP.10 ten leaves
visible, petal differentiation and expansion stage, LP.08
eight leaves visible; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast
hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.64 0.3 -0.32
80 AT4G00490 beta-amylase 2 beta-amylase 2, BETA-AMYLASE 9 -0.63 0.31 -0.33
81 AT5G65480 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED
DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: unknown protein (TAIR:AT4G38060.2); Has 1807
Blast hits to 1807 proteins in 277 species: Archae - 0;
Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385;
Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.3 -0.34
82 AT1G70230 TRICHOME BIREFRINGENCE-LIKE 27 ALTERED XYLOGLUCAN 4, TRICHOME
BIREFRINGENCE-LIKE 27		 0.63 0.32 -0.3
83 AT3G50410 OBF binding protein 1 OBF binding protein 1 -0.63 0.32 -0.31
84 AT1G49400 Nucleic acid-binding, OB-fold-like protein embryo defective 1129 0.63 0.32 -0.31
85 AT3G05320 O-fucosyltransferase family protein 0.63 0.34 -0.3
86 AT1G13950 eukaryotic elongation factor 5A-1 EUKARYOTIC ELONGATION FACTOR 5A-1,
EIF-5A, EUKARYOTIC ELONGATION
FACTOR 5A, eukaryotic elongation
factor 5A-1		 0.63 0.3 -0.33
87 AT2G22490 Cyclin D2;1 ATCYCD2;1, Cyclin D2;1 0.63 0.31 -0.31
88 AT5G43150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 1807 Blast hits to 1807
proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa
- 736; Fungi - 347; Plants - 385; Viruses - 0; Other
Eukaryotes - 339 (source: NCBI BLink).		 -0.63 0.33 -0.32
89 AT4G08980 F-BOX WITH WD-40 2 F-BOX WITH WD-40 2 -0.62 0.3 -0.31
90 AT4G25480 dehydration response element B1A ATCBF3, C-REPEAT BINDING FACTOR
3, dehydration response element
B1A		 -0.62 0.3 -0.3
91 AT3G01960 unknown protein; Has 13 Blast hits to 13 proteins in 5
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.62 0.33 -0.31
92 AT4G04070 transposable element gene -0.62 0.31 -0.32
93 AT5G38070 RING/FYVE/PHD zinc finger superfamily protein -0.62 0.31 -0.3
94 AT1G68470 Exostosin family protein -0.62 0.31 -0.32
95 AT1G58220 Homeodomain-like superfamily protein -0.61 0.3 -0.34
96 AT4G28706 pfkB-like carbohydrate kinase family protein -0.61 0.32 -0.32
97 AT5G52310 low-temperature-responsive protein 78 (LTI78) /
desiccation-responsive protein 29A (RD29A)		 COLD REGULATED 78, LTI140,
LOW-TEMPERATURE-INDUCED 78,
RESPONSIVE TO DESSICATION 29A		 -0.61 0.31 -0.3
98 AT1G12990 beta-1,4-N-acetylglucosaminyltransferase family protein -0.61 0.3 -0.32
99 AT3G48440 Zinc finger C-x8-C-x5-C-x3-H type family protein -0.59 0.32 -0.31
100 AT1G50590 RmlC-like cupins superfamily protein -0.59 0.33 -0.3
101 AT2G19780 Leucine-rich repeat (LRR) family protein -0.59 0.31 -0.32
102 AT4G23920 UDP-D-glucose/UDP-D-galactose 4-epimerase 2 UDP-GLC 4-EPIMERASE 2,
UDP-D-glucose/UDP-D-galactose
4-epimerase 2		 -0.59 0.3 -0.32
103 AT5G14960 DP-E2F-like 2 DP-E2F-like 2, E2FD, E2L1 -0.58 0.32 -0.3
104 AT4G34100 RING/U-box superfamily protein -0.58 0.31 -0.32
105 AT2G33440 RNA-binding (RRM/RBD/RNP motifs) family protein -0.58 0.32 -0.3
106 AT2G32860 beta glucosidase 33 beta glucosidase 33 -0.58 0.32 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
107 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II 		-0.78 0.43 -0.43 C0109
108 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.71 0.46 -0.47 C0032
109 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		-0.7 0.43 -0.42 C0056
110 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway 		-0.7 0.42 -0.44 C0210
111 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration 		-0.68 0.45 -0.44 C0107
112 C0015 p-Coumaric acid - 4-Coumarate scopoletin biosynthesis,
free phenylpropanoid acid biosynthesis,
phenylpropanoid biosynthesis,
simple coumarins biosynthesis,
4-hydroxybenzoate biosynthesis V,
suberin biosynthesis,
phenylpropanoid biosynthesis, initial reactions,
flavonoid biosynthesis 		-0.65 0.42 -0.45 C0015
113 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.61 0.29 -0.34 C0142