AGICode | AT2G17710 |
Description | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G17710 | unknown protein; Has 39 Blast hits to 39 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.31 | -0.29 | |||
2 | AT5G14070 | Thioredoxin superfamily protein | ROXY2 | 0.72 | 0.33 | -0.31 | ||
3 | AT1G02310 | Glycosyl hydrolase superfamily protein | endo-beta-mannanase 1 | -0.7 | 0.3 | -0.32 | ||
4 | AT1G07020 | unknown protein; Has 39 Blast hits to 39 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 3; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.69 | 0.31 | -0.3 | |||
5 | AT2G42310 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57785.1); Has 115 Blast hits to 115 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 44; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.69 | 0.3 | -0.29 | |||
6 | AT5G07960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
0.67 | 0.31 | -0.33 | |||
7 | AT1G16030 | heat shock protein 70B | heat shock protein 70B | -0.66 | 0.34 | -0.3 | ||
8 | AT2G03870 | Small nuclear ribonucleoprotein family protein | EMBRYO DEFECTIVE 2816 | 0.66 | 0.32 | -0.31 | ||
9 | AT5G24080 | Protein kinase superfamily protein | -0.65 | 0.31 | -0.32 | |||
10 | AT2G48060 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
-0.64 | 0.32 | -0.3 | |||
11 | AT5G42600 | marneral synthase | marneral synthase | -0.64 | 0.32 | -0.33 | ||
12 | AT2G25450 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
-0.64 | 0.33 | -0.32 | |||
13 | AT1G26450 | Carbohydrate-binding X8 domain superfamily protein | -0.63 | 0.29 | -0.31 | |||
14 | AT1G11040 | HSP40/DnaJ peptide-binding protein | 0.63 | 0.31 | -0.32 | |||
15 | AT3G03620 | MATE efflux family protein | -0.62 | 0.31 | -0.32 | |||
16 | AT1G06970 | cation/hydrogen exchanger 14 | ATCHX14, cation/hydrogen exchanger 14 |
0.62 | 0.29 | -0.31 | ||
17 | AT1G76210 | Arabidopsis protein of unknown function (DUF241) | 0.62 | 0.3 | -0.34 | |||
18 | AT4G14600 | Target SNARE coiled-coil domain protein | 0.61 | 0.32 | -0.32 | |||
19 | AT4G07480 | transposable element gene | 0.61 | 0.3 | -0.31 | |||
20 | AT2G11140 | transposable element gene | 0.61 | 0.32 | -0.32 | |||
21 | AT3G21400 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 29 Blast hits to 29 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 27; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.61 | 0.29 | -0.32 | |||
22 | AT1G14040 | EXS (ERD1/XPR1/SYG1) family protein | 0.6 | 0.32 | -0.33 | |||
23 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | 0.6 | 0.33 | -0.3 | ||
24 | AT4G01210 | glycosyl transferase family 1 protein | -0.6 | 0.29 | -0.31 | |||
25 | AT1G05410 | Protein of unknown function (DUF1423) | 0.6 | 0.31 | -0.3 | |||
26 | AT1G23330 | alpha/beta-Hydrolases superfamily protein | -0.6 | 0.3 | -0.31 | |||
27 | AT4G31020 | alpha/beta-Hydrolases superfamily protein | 0.59 | 0.33 | -0.3 | |||
28 | AT2G23860 | pseudogene, similar to VAP27, blastp match of 56% identity and 1.3e-25 P-value to GP|6688926|emb|CAB65313.1||AJ251365 VAP27 {Nicotiana plumbaginifolia} |
-0.59 | 0.34 | -0.32 | |||
29 | AT2G23240 | Plant EC metallothionein-like protein, family 15 | Arabidopsis thaliana metallothionein 4b |
-0.59 | 0.32 | -0.3 | ||
30 | AT4G30410 | sequence-specific DNA binding transcription factors | 0.58 | 0.33 | -0.31 | |||
31 | AT5G17720 | alpha/beta-Hydrolases superfamily protein | 0.58 | 0.32 | -0.3 | |||
32 | AT5G10880 | tRNA synthetase-related / tRNA ligase-related | -0.58 | 0.31 | -0.31 | |||
33 | AT2G31110 | Plant protein of unknown function (DUF828) | TRICHOME BIREFRINGENCE-LIKE 40 | 0.58 | 0.32 | -0.33 | ||
34 | AT1G47980 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis, F mature embryo stage, petal differentiation and expansion stage, E expanded cotyledon stage; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G62730.1); Has 169 Blast hits to 169 proteins in 41 species: Archae - 0; Bacteria - 68; Metazoa - 0; Fungi - 0; Plants - 101; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.57 | 0.31 | -0.34 | |||
35 | AT3G14030 | F-box associated ubiquitination effector family protein | -0.57 | 0.31 | -0.31 | |||
36 | AT1G32810 | RING/FYVE/PHD zinc finger superfamily protein | -0.57 | 0.32 | -0.3 | |||
37 | AT3G51190 | Ribosomal protein L2 family | -0.55 | 0.3 | -0.32 | |||
38 | AT4G31940 | cytochrome P450, family 82, subfamily C, polypeptide 4 | cytochrome P450, family 82, subfamily C, polypeptide 4 |
-0.55 | 0.31 | -0.33 | ||
39 | AT3G06290 | SAC3/GANP/Nin1/mts3/eIF-3 p25 family | AtSAC3B, yeast Sac3 homolog B | -0.55 | 0.33 | -0.33 | ||
40 | AT3G49950 | GRAS family transcription factor | -0.55 | 0.33 | -0.33 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
41 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.8 | 0.45 | -0.45 | ||
42 | C0057 | Anthranilic acid | - | Anthranilate | tryptophan biosynthesis, benzoylanthranilate biosynthesis |
-0.78 | 0.45 | -0.45 | ||
43 | C0052 | Adenosine | - | Adenosine | adenine and adenosine salvage VI, S-adenosyl-L-methionine cycle II, cytokinins degradation, methionine degradation I (to homocysteine), adenine and adenosine salvage II |
-0.75 | 0.3 | -0.31 | ||
44 | C0175 | MST_2379.9 | - | - | - | -0.74 | 0.43 | -0.45 | ||
45 | C0032 | 3-Phosphoglyceric acid | 3-Phospho-(R)-glyceric acid | 3-Phosphoglycerate | glycolysis I, gluconeogenesis I, Calvin-Benson-Bassham cycle, sucrose biosynthesis I, serine biosynthesis, photorespiration, Rubisco shunt, glycolysis IV (plant cytosol) |
-0.73 | 0.45 | -0.43 | ||
46 | C0011 | N-Acetyl-glutamic acid | N-Acetyl-D,L-glutamic acid | N-Acetyl-L-glutamate | arginine biosynthesis II (acetyl cycle), ornithine biosynthesis |
-0.7 | 0.43 | -0.43 | ||
47 | C0099 | Glucose-1-phosphate | α,β-D-Glucose-1-phosphate | α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate | galactose degradation I (Leloir pathway) | -0.69 | 0.46 | -0.44 | ||
48 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
-0.69 | 0.35 | -0.32 | ||
49 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.69 | 0.47 | -0.43 | ||
50 | C0267 | Zeatin | cis-Zeatin | cis-Zeatin | cytokinins-O-glucoside biosynthesis, cytokinins degradation, cytokinins 7-N-glucoside biosynthesis, cytokinins 9-N-glucoside biosynthesis, cis-zeatin biosynthesis |
-0.69 | 0.46 | -0.44 | ||
51 | C0140 | Lysine | L-Lysine | L-Lysine | lysine degradation II, tRNA charging, lysine biosynthesis VI, lysine degradation I |
-0.65 | 0.31 | -0.31 | ||
52 | C0113 | Histidinol | - | Histidinol | histidine biosynthesis | -0.64 | 0.32 | -0.3 | ||
53 | C0066 | Choline | - | Choline | choline biosynthesis III, phosphatidylcholine biosynthesis I, choline biosynthesis I, glycine betaine biosynthesis III (plants), choline biosynthesis II, sinapate ester biosynthesis, phospholipases |
-0.64 | 0.31 | -0.28 | ||
54 | C0137 | Leucine | L-Leucine | L-Leucine | indole-3-acetyl-amino acid biosynthesis, leucine biosynthesis, jasmonoyl-amino acid conjugates biosynthesis I, IAA biosynthesis II, tRNA charging, leucine degradation I |
-0.62 | 0.33 | -0.31 | ||
55 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.62 | 0.44 | -0.43 | ||
56 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.62 | 0.42 | -0.45 | ||
57 | C0216 | Proline | L-Proline | L-Proline | proline degradation II, arginine degradation VI (arginase 2 pathway), L-Ndelta-acetylornithine biosynthesis, tRNA charging, citrulline biosynthesis, proline biosynthesis III |
-0.6 | 0.31 | -0.32 | ||
58 | C0006 | β-Homothreonine | L-β-Homothreonine | - | - | -0.6 | 0.47 | -0.45 | ||
59 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.59 | 0.45 | -0.44 | ||
60 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | -0.58 | 0.3 | -0.32 | ||
61 | C0069 | Citrulline | - | Citrulline | citrulline-nitric oxide cycle, citrulline biosynthesis, nitric oxide biosynthesis I (in plants), urea cycle, citrulline degradation, arginine biosynthesis II (acetyl cycle), arginine biosynthesis I |
-0.58 | 0.33 | -0.32 |