AT1G03750 : CHROMATIN REMODELING 9
Query Information
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AGICode AT1G03750
Description switch 2
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT1G03750 switch 2 CHROMATIN REMODELING 9 1 0.32 -0.35
2 AT2G42700 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
vesicle-mediated transport, vesicle docking involved in
exocytosis; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14
growth stages; CONTAINS InterPro DOMAIN/s: Sec1-like
protein (InterPro:IPR001619); Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.69 0.32 -0.32
3 AT1G13380 Protein of unknown function (DUF1218) -0.69 0.31 -0.32
4 AT4G23980 auxin response factor 9 auxin response factor 9 0.67 0.31 -0.32
5 AT5G07920 diacylglycerol kinase1 DIACYLGLYCEROL KINASE 1,
diacylglycerol kinase1		 0.67 0.32 -0.33
6 AT1G09910 Rhamnogalacturonate lyase family protein 0.66 0.32 -0.33
7 AT1G78940 Protein kinase protein with adenine nucleotide alpha
hydrolases-like domain		 0.64 0.33 -0.31
8 AT3G63090 Ubiquitin carboxyl-terminal hydrolase family protein -0.63 0.32 -0.32
9 AT2G37650 GRAS family transcription factor 0.63 0.32 -0.33
10 AT5G56260 Ribonuclease E inhibitor RraA/Dimethylmenaquinone
methyltransferase		 -0.63 0.33 -0.34
11 AT1G42250 transposable element gene 0.63 0.31 -0.31
12 AT2G29130 laccase 2 ATLAC2, laccase 2 0.62 0.3 -0.31
13 AT3G12820 myb domain protein 10 myb domain protein 10, myb domain
protein 10		 -0.62 0.3 -0.31
14 AT1G54470 RNI-like superfamily protein resistance to Peronospora
parasitica 27		 -0.62 0.31 -0.32
15 AT4G29340 profilin 4 profilin 4 -0.61 0.32 -0.31
16 AT1G16010 magnesium transporter 2 AtMGT2, AtMRS2-1, magnesium
transporter 2, MRS2-1		 0.61 0.3 -0.31
17 AT4G38830 cysteine-rich RLK (RECEPTOR-like protein kinase) 26 cysteine-rich RLK (RECEPTOR-like
protein kinase) 26		 -0.6 0.32 -0.33
18 AT5G05160 Leucine-rich repeat protein kinase family protein REDUCED IN LATERAL GROWTH1 0.6 0.32 -0.33
19 AT1G21050 Protein of unknown function, DUF617 -0.6 0.29 -0.31
20 AT3G17890 unknown protein; Has 31 Blast hits to 31 proteins in 12
species: Archae - 0; Bacteria - 4; Metazoa - 5; Fungi - 10;
Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.59 0.32 -0.3
21 AT5G35660 Glycine-rich protein family 0.59 0.34 -0.3
22 AT5G37660 plasmodesmata-located protein 7 plasmodesmata-located protein 7 -0.59 0.31 -0.31
23 AT3G10700 galacturonic acid kinase galacturonic acid kinase -0.59 0.32 -0.34
24 AT1G15750 Transducin family protein / WD-40 repeat family protein TOPLESS, WUS-INTERACTING PROTEIN 1 0.59 0.32 -0.29
25 AT1G58230 binding 0.59 0.31 -0.33
26 AT3G26560 ATP-dependent RNA helicase, putative 0.59 0.31 -0.31
27 AT4G37020 BEST Arabidopsis thaliana protein match is: eukaryotic
initiation factor 4A-III (TAIR:AT3G19760.1); Has 30201
Blast hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.59 0.31 -0.31
28 AT1G09420 glucose-6-phosphate dehydrogenase 4 glucose-6-phosphate dehydrogenase
4		 0.59 0.32 -0.35
29 AT1G22870 Protein kinase family protein with ARM repeat domain 0.58 0.33 -0.32
30 AT2G27900 CONTAINS InterPro DOMAIN/s: Protein of unknown function
DUF2451, C-terminal (InterPro:IPR019514), Vacuolar protein
sorting-associated protein 54 (InterPro:IPR019515); Has 316
Blast hits to 252 proteins in 92 species: Archae - 0;
Bacteria - 2; Metazoa - 200; Fungi - 2; Plants - 68;
Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink).		 0.58 0.33 -0.3
31 AT3G03200 NAC domain containing protein 45 NAC domain containing protein 45,
NAC domain containing protein 45		 0.57 0.33 -0.32
32 AT4G18990 xyloglucan endotransglucosylase/hydrolase 29 xyloglucan
endotransglucosylase/hydrolase 29		 0.57 0.3 -0.31
33 AT3G57980 DNA-binding bromodomain-containing protein 0.56 0.31 -0.31
34 AT1G15020 quiescin-sulfhydryl oxidase 1 quiescin-sulfhydryl oxidase 1,
QSO2, quiescin-sulfhydryl oxidase
1		 -0.56 0.3 -0.29
35 AT5G66640 DA1-related protein 3 DA1-related protein 3 -0.56 0.31 -0.32
36 AT2G07505 zinc ion binding -0.56 0.32 -0.31
37 AT1G30370 alpha/beta-Hydrolases superfamily protein DAD1-like acylhydrolase -0.56 0.3 -0.31
38 AT1G68840 related to ABI3/VP1 2 AtRAV2, ETHYLENE RESPONSE DNA
BINDING FACTOR 2, RELATED TO AP2
8, related to ABI3/VP1 2,
TEMPRANILLO 2		 -0.55 0.31 -0.31
39 AT3G28890 receptor like protein 43 receptor like protein 43, receptor
like protein 43		 0.55 0.33 -0.31
40 AT2G12720 transposable element gene 0.55 0.3 -0.31
41 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.55 0.32 -0.33
42 AT4G11050 glycosyl hydrolase 9C3 glycosyl hydrolase 9C3, glycosyl
hydrolase 9C3		 -0.55 0.3 -0.32
43 AT3G62350 BEST Arabidopsis thaliana protein match is: F-box family
protein (TAIR:AT1G71320.1); Has 136 Blast hits to 136
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes -
2 (source: NCBI BLink).		 -0.54 0.32 -0.3
44 AT3G21830 SKP1-like 8 SKP1-like 8, SKP1-like 8 -0.54 0.3 -0.34
45 AT1G66720 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 0.54 0.33 -0.32
46 AT2G34820 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 -0.54 0.31 -0.31
47 AT2G43280 Far-red impaired responsive (FAR1) family protein -0.54 0.3 -0.31
48 AT1G60450 galactinol synthase 7 galactinol synthase 7, galactinol
synthase 7		 0.54 0.32 -0.31
49 AT2G36020 HVA22-like protein J HVA22-like protein J -0.53 0.33 -0.31
50 AT5G48580 FK506- and rapamycin-binding protein 15 kD-2 FK506- and rapamycin-binding
protein 15 kD-2		 -0.53 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
51 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) 0.74 0.42 -0.42 C0099
52 C0145 Maltotetraose - Maltotetraose starch degradation II 0.74 0.45 -0.46 C0145
53 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging 		0.71 0.44 -0.43 C0056