AGICode | AT2G01970 |
Description | Endomembrane protein 70 protein family |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G01970 | Endomembrane protein 70 protein family | 1 | 0.32 | -0.3 | |||
2 | AT1G60650 | RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain |
AtRZ-1b, RZ-1b | 0.79 | 0.32 | -0.31 | ||
3 | AT5G65270 | RAB GTPase homolog A4A | RAB GTPase homolog A4A, RAB GTPase homolog A4A |
0.78 | 0.31 | -0.31 | ||
4 | AT5G10840 | Endomembrane protein 70 protein family | 0.77 | 0.29 | -0.3 | |||
5 | AT2G42710 | Ribosomal protein L1p/L10e family | 0.76 | 0.31 | -0.3 | |||
6 | AT5G14030 | translocon-associated protein beta (TRAPB) family protein | 0.76 | 0.3 | -0.3 | |||
7 | AT2G46170 | Reticulon family protein | 0.76 | 0.32 | -0.35 | |||
8 | AT1G16870 | mitochondrial 28S ribosomal protein S29-related | 0.75 | 0.34 | -0.31 | |||
9 | AT2G33845 | Nucleic acid-binding, OB-fold-like protein | 0.75 | 0.32 | -0.32 | |||
10 | AT5G19980 | golgi nucleotide sugar transporter 4 | golgi nucleotide sugar transporter 4 |
0.75 | 0.32 | -0.34 | ||
11 | AT4G20020 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G44780.1); Has 28928 Blast hits to 16023 proteins in 1033 species: Archae - 4; Bacteria - 4155; Metazoa - 15463; Fungi - 2938; Plants - 3091; Viruses - 205; Other Eukaryotes - 3072 (source: NCBI BLink). |
0.74 | 0.32 | -0.29 | |||
12 | AT3G52930 | Aldolase superfamily protein | 0.73 | 0.33 | -0.32 | |||
13 | AT1G77440 | 20S proteasome beta subunit C2 | 20S proteasome beta subunit C2 | 0.73 | 0.33 | -0.31 | ||
14 | AT3G15640 | Rubredoxin-like superfamily protein | 0.72 | 0.31 | -0.29 | |||
15 | AT1G79550 | phosphoglycerate kinase | phosphoglycerate kinase | 0.71 | 0.32 | -0.33 | ||
16 | AT2G21160 | Translocon-associated protein (TRAP), alpha subunit | 0.71 | 0.3 | -0.3 | |||
17 | AT3G52070 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 23 Blast hits to 23 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.71 | 0.32 | -0.35 | |||
18 | AT3G57280 | Transmembrane proteins 14C | 0.7 | 0.31 | -0.31 | |||
19 | AT4G12650 | Endomembrane protein 70 protein family | 0.7 | 0.32 | -0.31 | |||
20 | AT5G18520 | Lung seven transmembrane receptor family protein | 0.7 | 0.33 | -0.31 | |||
21 | AT3G59920 | RAB GDP dissociation inhibitor 2 | RAB GDP dissociation inhibitor 2, RAB GDP dissociation inhibitor 2 |
0.7 | 0.3 | -0.3 | ||
22 | AT1G14670 | Endomembrane protein 70 protein family | 0.69 | 0.32 | -0.32 | |||
23 | AT2G15690 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.69 | 0.33 | -0.32 | |||
24 | AT4G01280 | Homeodomain-like superfamily protein | -0.68 | 0.31 | -0.31 | |||
25 | AT5G54970 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.68 | 0.33 | -0.33 | |||
26 | AT1G43690 | ubiquitin interaction motif-containing protein | 0.68 | 0.32 | -0.32 | |||
27 | AT4G08980 | F-BOX WITH WD-40 2 | F-BOX WITH WD-40 2 | -0.68 | 0.31 | -0.32 | ||
28 | AT5G66680 | dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein |
DEFECTIVE GLYCOSYLATION | 0.68 | 0.31 | -0.32 | ||
29 | AT5G41685 | Mitochondrial outer membrane translocase complex, subunit Tom7 |
0.68 | 0.32 | -0.34 | |||
30 | AT5G10350 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.68 | 0.3 | -0.32 | |||
31 | AT5G44780 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20020.2); Has 9661 Blast hits to 6233 proteins in 635 species: Archae - 4; Bacteria - 1116; Metazoa - 4251; Fungi - 1510; Plants - 1359; Viruses - 43; Other Eukaryotes - 1378 (source: NCBI BLink). |
0.68 | 0.34 | -0.31 | |||
32 | AT1G10130 | endoplasmic reticulum-type calcium-transporting ATPase 3 | ARABIDOPSIS THALIANA ER-TYPE CA2+-ATPASE 3, endoplasmic reticulum-type calcium-transporting ATPase 3 |
0.67 | 0.29 | -0.3 | ||
33 | AT5G07960 | unknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0139 (InterPro:IPR005351); Has 193 Blast hits to 193 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 130; Fungi - 0; Plants - 52; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
0.67 | 0.31 | -0.34 | |||
34 | AT1G69960 | serine/threonine protein phosphatase 2A | serine/threonine protein phosphatase 2A |
0.67 | 0.34 | -0.32 | ||
35 | AT4G24330 | Protein of unknown function (DUF1682) | 0.67 | 0.32 | -0.32 | |||
36 | AT4G32390 | Nucleotide-sugar transporter family protein | 0.67 | 0.3 | -0.31 | |||
37 | AT1G18940 | Nodulin-like / Major Facilitator Superfamily protein | 0.66 | 0.32 | -0.3 | |||
38 | AT1G53170 | ethylene response factor 8 | ATERF-8, ETHYLENE RESPONSE ELEMENT BINDING FACTOR 4, ethylene response factor 8 |
-0.66 | 0.31 | -0.3 | ||
39 | AT5G08430 | SWIB/MDM2 domain;Plus-3;GYF | -0.64 | 0.32 | -0.29 | |||
40 | AT1G67530 | ARM repeat superfamily protein | -0.63 | 0.32 | -0.32 | |||
41 | AT1G69490 | NAC-like, activated by AP3/PI | Arabidopsis NAC domain containing protein 29, NAC-LIKE, ACTIVATED BY AP3/PI, NAC-like, activated by AP3/PI |
-0.63 | 0.32 | -0.3 | ||
42 | AT3G18930 | RING/U-box superfamily protein | -0.62 | 0.33 | -0.31 | |||
43 | AT2G19550 | alpha/beta-Hydrolases superfamily protein | -0.61 | 0.32 | -0.3 | |||
44 | AT4G31270 | sequence-specific DNA binding transcription factors | -0.6 | 0.33 | -0.34 | |||
45 | AT2G22310 | ubiquitin-specific protease 4 | ubiquitin-specific protease 4, ubiquitin-specific protease 4 |
-0.6 | 0.32 | -0.32 | ||
46 | AT4G18000 | unknown protein; Has 2 Blast hits to 2 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.6 | 0.31 | -0.31 | |||
47 | AT4G36590 | MADS-box transcription factor family protein | -0.58 | 0.33 | -0.34 | |||
48 | AT1G22190 | Integrase-type DNA-binding superfamily protein | related to AP2 4 | -0.58 | 0.32 | -0.32 | ||
49 | AT1G75410 | BEL1-like homeodomain 3 | BEL1-like homeodomain 3 | -0.58 | 0.34 | -0.33 | ||
50 | AT4G18395 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.57 | 0.29 | -0.33 | |||
51 | AT4G24020 | NIN like protein 7 | NIN like protein 7 | -0.57 | 0.31 | -0.31 | ||
52 | AT5G51990 | C-repeat-binding factor 4 | C-repeat-binding factor 4, DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D |
-0.56 | 0.32 | -0.31 | ||
53 | AT4G27657 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G54145.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
-0.56 | 0.31 | -0.32 | |||
54 | AT4G12990 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plant-type cell wall; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 4 Blast hits to 4 proteins in 1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 4; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
-0.56 | 0.3 | -0.31 | |||
55 | AT2G36040 | transposable element gene | -0.55 | 0.31 | -0.31 | |||
56 | AT3G06210 | ARM repeat superfamily protein | -0.55 | 0.34 | -0.33 | |||
57 | AT2G25200 | Plant protein of unknown function (DUF868) | -0.55 | 0.3 | -0.34 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
58 | C0003 | α-Tocopherol | - | alpha-Tocopherol | vitamin E biosynthesis | -0.76 | 0.47 | -0.47 | ||
59 | C0030 | 3-Methylsulfinyl-n-propylglucosinolate | - | 3-Methylsulfinylpropyl-glucosinolate | glucosinolate biosynthesis from homomethionine | -0.76 | 0.43 | -0.44 | ||
60 | C0056 | AMP | - | AMP | PRPP biosynthesis I, fatty acid biosynthesis (plant mitochondria), adenine and adenosine salvage VI, biotin-carboxyl carrier protein assembly, molybdenum cofactor biosynthesis II (eukaryotes), gluconeogenesis I, adenine and adenosine salvage II, asparagine biosynthesis I, L-glutamine biosynthesis II (tRNA-dependent), trans-cinnamoyl-CoA biosynthesis, IAA degradation V, ethanol degradation II (cytosol), arginine biosynthesis I, IAA degradation IV, fatty acid activation, selenate reduction, IAA biosynthesis VII, 4-hydroxybenzoate biosynthesis V, tetrapyrrole biosynthesis I, flavonoid biosynthesis, indole-3-acetyl-amino acid biosynthesis, glutamine biosynthesis III, ethanol degradation IV (peroxisomal), glycolysis I, asparagine biosynthesis III (tRNA-dependent), jasmonoyl-amino acid conjugates biosynthesis I, molybdenum cofactor biosynthesis, pyridine nucleotide cycling (plants), scopoletin biosynthesis, jasmonic acid biosynthesis, adenosine nucleotides degradation I, fatty acid beta-oxidation II (core pathway), simple coumarins biosynthesis, sulfate reduction II (assimilatory), pantothenate biosynthesis, sporopollenin precursor biosynthesis, urea cycle, thiamine biosynthesis II, starch degradation II, NAD biosynthesis I (from aspartate), citrulline-nitric oxide cycle, beta-alanine biosynthesis II, arginine biosynthesis II (acetyl cycle), suberin biosynthesis, linoleate biosynthesis I (plants), trans-zeatin biosynthesis, tetrahydrofolate biosynthesis II, purine nucleotides de novo biosynthesis II, phenylpropanoid biosynthesis, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I, purine nucleotide metabolism (phosphotransfer and nucleotide modification), tRNA charging |
-0.69 | 0.45 | -0.43 | ||
61 | C0142 | Malonic acid | - | Malonate | fatty acid biosynthesis (plant mitochondria) | -0.66 | 0.3 | -0.31 | ||
62 | C0097 | Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | D-Glucosamine-6-phosphate | UDP-N-acetyl-D-glucosamine biosynthesis II | -0.66 | 0.33 | -0.3 | ||
63 | C0094 | Galactosamine | D-Galactosamine | - | - | -0.65 | 0.47 | -0.47 | ||
64 | C0087 | Erythrose-4-phosphate | D-Erythrose-4-phosphate | D-Erythrose-4-phosphate | Rubisco shunt, pentose phosphate pathway (non-oxidative branch), chorismate biosynthesis, Calvin-Benson-Bassham cycle |
-0.62 | 0.46 | -0.46 | ||
65 | C0218 | Pyridoxamine phosphate | Pyridoxamine-5'-phosphate | Pyridoxamine-5'-phosphate | pyridoxal 5'-phosphate salvage pathway | -0.55 | 0.31 | -0.31 |