AT2G16690 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G16690
Description transposable element gene
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G16690 transposable element gene 1 0.31 -0.32
2 AT1G67990 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 TAPETUM-SPECIFIC METHYLTRANSFERASE
1, TSM1		 0.69 0.32 -0.33
3 AT5G15480 C2H2-type zinc finger family protein 0.68 0.32 -0.32
4 AT1G15850 Transducin/WD40 repeat-like superfamily protein 0.68 0.3 -0.32
5 AT1G16040 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI
anchor biosynthetic process; LOCATED IN: integral to
membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24
plant structures; EXPRESSED DURING: 13 growth stages;
CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F
(InterPro:IPR009580); Has 280 Blast hits to 280 proteins in
133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi
- 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12
(source: NCBI BLink).		 -0.62 0.3 -0.34
6 AT2G20380 Galactose oxidase/kelch repeat superfamily protein 0.62 0.3 -0.32
7 AT3G51530 F-box/RNI-like/FBD-like domains-containing protein -0.61 0.31 -0.33
8 AT4G21650 Subtilase family protein 0.6 0.32 -0.32
9 AT4G22800 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.6 0.31 -0.3
10 AT2G39620 Pentatricopeptide repeat (PPR) superfamily protein 0.6 0.33 -0.31
11 AT3G42220 transposable element gene 0.59 0.3 -0.31
12 AT2G46640 unknown protein; Has 19 Blast hits to 19 proteins in 7
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 17; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).		 0.58 0.3 -0.31
13 AT1G50750 Plant mobile domain protein family 0.58 0.3 -0.3
14 AT1G09240 nicotianamine synthase 3 ARABIDOPSIS THALIANA NICOTIANAMINE
SYNTHASE 3, nicotianamine synthase
3		 -0.57 0.32 -0.32
15 AT5G08130 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 BIM1 0.57 0.31 -0.33
16 AT2G38185 RING/U-box superfamily protein 0.57 0.29 -0.33
17 AT5G58830 Subtilisin-like serine endopeptidase family protein 0.57 0.31 -0.3
18 AT1G44318 Aldolase superfamily protein hemb2 0.56 0.3 -0.31
19 AT2G22060 BEST Arabidopsis thaliana protein match is: Galactose
oxidase/kelch repeat superfamily protein
(TAIR:AT2G22030.1); Has 148 Blast hits to 148 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 148; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.56 0.31 -0.32
20 AT5G33390 glycine-rich protein 0.56 0.33 -0.31
21 AT3G23650 protein kinase-related 0.56 0.31 -0.32
22 AT3G16750 unknown protein; Has 4708 Blast hits to 1416 proteins in
195 species: Archae - 36; Bacteria - 1240; Metazoa - 1232;
Fungi - 406; Plants - 191; Viruses - 23; Other Eukaryotes -
1580 (source: NCBI BLink).		 0.55 0.32 -0.31
23 AT5G30440 transposable element gene 0.53 0.3 -0.32
24 AT3G02330 Pentatricopeptide repeat (PPR) superfamily protein 0.53 0.31 -0.32
25 AT5G60470 C2H2 and C2HC zinc fingers superfamily protein 0.52 0.3 -0.32
26 AT2G32740 galactosyltransferase 13 ARABIDOPSIS GALACTOSYLTRANSFERASE
13, galactosyltransferase 13		 -0.52 0.33 -0.3
27 AT2G45940 Protein of unknown function (DUF295) 0.52 0.32 -0.33
28 AT3G26390 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G39782.1); Has 16 Blast hits
to 16 proteins in 4 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.52 0.31 -0.31
29 AT1G07850 Protein of unknown function (DUF604) 0.51 0.33 -0.32
30 AT5G22970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G60000.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 0.51 0.33 -0.31
31 AT5G04180 alpha carbonic anhydrase 3 alpha carbonic anhydrase 3, ALPHA
CARBONIC ANHYDRASE 3		 0.51 0.3 -0.3
32 AT4G10410 Leucine-rich repeat (LRR) family protein 0.5 0.31 -0.32
33 AT1G43930 transposable element gene 0.5 0.28 -0.31
34 AT4G21800 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 quatre-quart2 -0.5 0.31 -0.33
35 AT2G16960 ARM repeat superfamily protein 0.5 0.3 -0.31
36 AT4G04070 transposable element gene 0.5 0.32 -0.32
37 AT5G54700 Ankyrin repeat family protein 0.49 0.3 -0.3
38 AT2G04660 anaphase-promoting complex/cyclosome 2 anaphase-promoting
complex/cyclosome 2		 0.49 0.32 -0.32
39 AT4G22600 unknown protein; Has 26 Blast hits to 26 proteins in 8
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.49 0.3 -0.32
40 AT4G11930 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G11940.1); Has 102 Blast hits
to 102 proteins in 12 species: Archae - 0; Bacteria - 0;
Metazoa - 1; Fungi - 2; Plants - 99; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.49 0.31 -0.33
41 AT1G22090 Protein of unknown function (DUF626) embryo defective 2204 0.49 0.3 -0.34
42 AT4G08890 transposable element gene -0.47 0.31 -0.32
43 AT1G65880 benzoyloxyglucosinolate 1 benzoyloxyglucosinolate 1 -0.46 0.33 -0.32
44 AT2G41650 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 3 Blast hits to 3 proteins in
1 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi -
0; Plants - 3; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.45 0.31 -0.32
45 AT5G28650 WRKY DNA-binding protein 74 ARABIDOPSIS THALIANA WRKY
DNA-BINDING PROTEIN 74, WRKY
DNA-binding protein 74		 -0.44 0.33 -0.32
46 AT5G16850 telomerase reverse transcriptase telomerase reverse transcriptase,
telomerase reverse transcriptase		 -0.43 0.32 -0.32
47 AT1G49290 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13620.1); Has 99 Blast hits
to 93 proteins in 11 species: Archae - 0; Bacteria - 0;
Metazoa - 2; Fungi - 0; Plants - 97; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.43 0.33 -0.31
48 AT3G43310 pseudogene, hypothetical protein, hypothetical protein
At2g15420 - Arabidopsis thaliana, EMBL:AC006920		 -0.43 0.31 -0.33
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
49 C0006 β-Homothreonine L-β-Homothreonine - - 0.73 0.44 -0.44
50 C0261 UDP-glucose - UDP-D-glucose quercetin glucoside biosynthesis (Arabidopsis),
abscisic acid glucose ester biosynthesis,
anthocyanin biosynthesis (delphinidin 3-O-glucoside),
UDP-glucose biosynthesis (from sucrose),
2,4,6-trinitrotoluene degradation,
galactose degradation I (Leloir pathway),
cytokinins-O-glucoside biosynthesis,
trehalose biosynthesis I,
dolichyl-diphosphooligosaccharide biosynthesis,
phenolic malonylglucosides biosynthesis,
callose biosynthesis,
superpathway of anthocyanin biosynthesis (from cyanidin and cyanidin 3-O-glucoside),
glucosinolate biosynthesis from hexahomomethionine,
coniferin metabolism,
glucosinolate biosynthesis from phenylalanine,
xyloglucan biosynthesis,
glucosinolate biosynthesis from pentahomomethionine,
anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside),
glucosinolate biosynthesis from dihomomethionine,
cellulose biosynthesis,
sinapate ester biosynthesis,
superpathway of IAA conjugate biosynthesis,
salicylate glucosides biosynthesis IV,
sucrose biosynthesis I,
glucosinolate biosynthesis from trihomomethionine,
tetrahydrofolate biosynthesis II,
sucrose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
coumarin biosynthesis (via 2-coumarate),
superpathway of sucrose and starch metabolism I (non-photosynthetic tissue),
monolignol glucosides biosynthesis,
glucosinolate biosynthesis from homomethionine,
kaempferol glucoside biosynthesis (Arabidopsis),
salicylate glucosides biosynthesis III,
cytokinins 7-N-glucoside biosynthesis,
galactose degradation III,
cytokinins 9-N-glucoside biosynthesis,
glucosinolate biosynthesis from tryptophan,
UDP-galactose biosynthesis,
salicylate glucosides biosynthesis II,
stachyose degradation,
superpathway of sucrose and starch metabolism II (photosynthetic tissue),
UDP-glucose biosynthesis (from glucose 6-phosphate),
sphingolipid biosynthesis (plants),
glucosinolate biosynthesis from tetrahomomethionine,
galactose degradation II,
UDP-L-rhamnose biosynthesis 		0.7 0.43 -0.46 C0261
51 C0061 Aspartic acid L-Aspartic acid L-Aspartate purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging,
indole-3-acetyl-amino acid biosynthesis,
citrulline-nitric oxide cycle,
asparagine degradation I,
cyanide detoxification II,
asparagine biosynthesis I,
asparagine biosynthesis III (tRNA-dependent),
arginine biosynthesis I,
inosine-5'-phosphate biosynthesis II,
uridine-5'-phosphate biosynthesis,
aspartate biosynthesis,
homoserine biosynthesis,
lysine biosynthesis VI,
aspartate degradation II,
urea cycle,
purine nucleotides de novo biosynthesis II,
NAD biosynthesis I (from aspartate),
IAA degradation IV,
arginine biosynthesis II (acetyl cycle) 		0.68 0.31 -0.34 C0061
52 C0259 Tyramine - Tyramine hydroxycinnamic acid tyramine amides biosynthesis,
suberin biosynthesis 		0.67 0.3 -0.31 C0259
53 C0088 FAD - FAD cytokinins degradation,
lysine degradation II,
valine degradation I,
isoleucine degradation I,
flavin biosynthesis I (bacteria and plants) 		0.66 0.44 -0.43 C0088
54 C0262 UDP-glucuronic acid - UDP-D-glucuronate xylan biosynthesis,
UDP-D-glucuronate biosynthesis (from myo-inositol),
UDP-D-galacturonate biosynthesis I (from UDP-D-glucuronate),
UDP-D-apiose biosynthesis (from UDP-D-glucuronate),
galactose degradation III,
UDP-D-xylose and UDP-D-glucuronate biosynthesis 		0.65 0.45 -0.47 C0262
55 C0066 Choline - Choline choline biosynthesis III,
phosphatidylcholine biosynthesis I,
choline biosynthesis I,
glycine betaine biosynthesis III (plants),
choline biosynthesis II,
sinapate ester biosynthesis,
phospholipases 		0.63 0.31 -0.31 C0066
56 C0218 Pyridoxamine phosphate Pyridoxamine-5'-phosphate Pyridoxamine-5'-phosphate pyridoxal 5'-phosphate salvage pathway 0.58 0.31 -0.3 C0218
57 C0058 Arginine D,L-Arginine L-Arginine arginine degradation VI (arginase 2 pathway),
arginine degradation I (arginase pathway),
arginine biosynthesis I,
putrescine biosynthesis II,
nitric oxide biosynthesis I (in plants),
citrulline biosynthesis,
putrescine biosynthesis I,
tRNA charging,
arginine biosynthesis II (acetyl cycle),
citrulline-nitric oxide cycle,
urea cycle,
L-Ndelta-acetylornithine biosynthesis 		0.58 0.32 -0.32 C0058
58 C0013 N2-Acetyl-Ornithine N2-Acetyl-L-ornithine N-acetyl-L-ornithine arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.54 0.32 -0.32 C0013
59 C0112 Histidine L-Histidine L-Histidine tRNA charging,
histidine biosynthesis 		0.51 0.32 -0.3 C0112
60 C0022 1,4-Butanediamine - Putrescine spermine and spermidine degradation III,
putrescine degradation IV,
superpathway of polyamine biosynthesis,
putrescine biosynthesis II,
spermidine biosynthesis I,
putrescine biosynthesis I 		0.51 0.31 -0.32 C0022