AT2G48110 : MED33B
Query Information
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AGICode AT2G48110
Description reduced epidermal fluorescence 4
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G48110 reduced epidermal fluorescence 4 MED33B, REDUCED EPIDERMAL
FLUORESCENCE 4		 1 0.33 -0.32
2 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6		 -0.67 0.32 -0.33
3 AT1G04070 translocase of outer membrane 22-I ATTOM22-I, translocase of outer
membrane 22-I		 -0.67 0.3 -0.3
4 AT1G64220 translocase of outer membrane 7 kDa subunit 2 translocase of outer membrane 7
kDa subunit 2		 -0.66 0.31 -0.31
5 AT5G02050 Mitochondrial glycoprotein family protein -0.65 0.35 -0.31
6 AT5G23300 pyrimidine d pyrimidine d -0.65 0.32 -0.32
7 AT4G04740 calcium-dependent protein kinase 23 ATCPK23, calcium-dependent protein
kinase 23		 0.64 0.31 -0.32
8 AT5G08040 mitochondrial import receptor subunit TOM5 homolog mitochondrial import receptor
subunit TOM5 homolog		 -0.64 0.33 -0.34
9 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 -0.64 0.34 -0.34
10 AT1G61870 pentatricopeptide repeat 336 pentatricopeptide repeat 336 -0.63 0.32 -0.3
11 AT3G13160 Tetratricopeptide repeat (TPR)-like superfamily protein -0.63 0.32 -0.3
12 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein		 -0.63 0.3 -0.33
13 AT2G04520 Nucleic acid-binding, OB-fold-like protein -0.63 0.32 -0.31
14 AT5G44450 methyltransferases -0.63 0.33 -0.32
15 AT2G17630 Pyridoxal phosphate (PLP)-dependent transferases
superfamily protein		 -0.63 0.32 -0.32
16 AT3G22430 CONTAINS InterPro DOMAIN/s: Domain of unknown function XS
(InterPro:IPR005380); BEST Arabidopsis thaliana protein
match is: XS domain-containing protein / XS zinc finger
domain-containing protein-related (TAIR:AT5G23570.1); Has
565 Blast hits to 510 proteins in 121 species: Archae - 2;
Bacteria - 90; Metazoa - 191; Fungi - 32; Plants - 51;
Viruses - 4; Other Eukaryotes - 195 (source: NCBI BLink).		 0.62 0.33 -0.31
17 AT4G36020 cold shock domain protein 1 cold shock domain protein 1 -0.62 0.3 -0.33
18 AT2G40010 Ribosomal protein L10 family protein -0.62 0.32 -0.31
19 AT3G49450 F-box and associated interaction domains-containing protein 0.61 0.31 -0.33
20 AT3G46560 Tim10/DDP family zinc finger protein embryo defective 2474, TIM9 -0.61 0.3 -0.33
21 AT1G71070 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase
family protein		 -0.6 0.31 -0.3
22 AT1G48310 chromatin remodeling factor18 CHA18, chromatin remodeling
factor18		 0.6 0.3 -0.33
23 AT4G25210 DNA-binding storekeeper protein-related transcriptional
regulator		 -0.6 0.3 -0.31
24 AT1G70350 unknown protein; Has 98 Blast hits to 98 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 -0.6 0.29 -0.33
25 AT3G16050 pyridoxine biosynthesis 1.2 A37, ARABIDOPSIS THALIANA
PYRIDOXINE BIOSYNTHESIS 1.2,
pyridoxine biosynthesis 1.2		 -0.6 0.33 -0.31
26 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 -0.6 0.34 -0.31
27 AT4G15475 F-box/RNI-like superfamily protein 0.6 0.31 -0.3
28 AT1G53345 unknown protein; INVOLVED IN: biological_process unknown;
LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant
structures; EXPRESSED DURING: 4 anthesis, F mature embryo
stage, petal differentiation and expansion stage, E
expanded cotyledon stage, D bilateral stage; BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT5G09580.1); Has 201 Blast hits to 201 proteins in
75 species: Archae - 6; Bacteria - 102; Metazoa - 2; Fungi
- 0; Plants - 47; Viruses - 7; Other Eukaryotes - 37
(source: NCBI BLink).		 -0.59 0.32 -0.32
29 AT4G36680 Tetratricopeptide repeat (TPR)-like superfamily protein -0.59 0.28 -0.3
30 AT5G24570 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.58 0.31 -0.32
31 AT5G24850 cryptochrome 3 cryptochrome 3 -0.57 0.32 -0.32
32 AT5G56030 heat shock protein 81-2 HEAT SHOCK PROTEIN 90.2,
EARLY-RESPONSIVE TO DEHYDRATION 8,
heat shock protein 81-2, heat
shock protein 81.2, HEAT SHOCK
PROTEIN 90.2		 -0.57 0.32 -0.29
33 AT5G53830 VQ motif-containing protein 0.57 0.3 -0.32
34 AT1G80340 gibberellin 3-oxidase 2 ARABIDOPSIS THALIANA
GIBBERELLIN-3-OXIDASE 2,
gibberellin 3-oxidase 2, GA4H		 -0.57 0.31 -0.31
35 AT1G09010 glycoside hydrolase family 2 protein 0.57 0.31 -0.32
36 AT1G09510 NAD(P)-binding Rossmann-fold superfamily protein 0.56 0.32 -0.32
37 AT5G45090 phloem protein 2-A7 phloem protein 2-A7, phloem
protein 2-A7		 0.55 0.3 -0.32
38 AT4G18770 myb domain protein 98 myb domain protein 98, myb domain
protein 98		 0.55 0.32 -0.32
39 AT3G04750 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.33 -0.3
40 AT5G22910 cation/H+ exchanger 9 ARABIDOPSIS THALIANA CATION/H+
EXCHANGER 9, cation/H+ exchanger
9		 0.54 0.32 -0.32
41 AT1G19390 Wall-associated kinase family protein 0.54 0.32 -0.32
42 AT4G14990 Topoisomerase II-associated protein PAT1 0.53 0.33 -0.28
43 AT5G04560 HhH-GPD base excision DNA repair family protein DEMETER 0.53 0.29 -0.32
44 AT3G25990 Homeodomain-like superfamily protein 0.53 0.31 -0.3
45 AT3G20310 ethylene response factor 7 ATERF-7, ATERF7, ethylene response
factor 7		 0.53 0.34 -0.33
46 AT3G06670 binding 0.51 0.34 -0.35
47 AT4G35660 Arabidopsis protein of unknown function (DUF241) 0.5 0.32 -0.28
48 AT1G10610 basic helix-loop-helix (bHLH) DNA-binding superfamily
protein		 0.5 0.32 -0.32
49 AT4G18000 unknown protein; Has 2 Blast hits to 2 proteins in 1
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 2; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 0.5 0.31 -0.3
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
50 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		0.78 0.44 -0.48 C0032
51 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		0.71 0.48 -0.42 C0053