AT2G19540 : -
Query Information
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AGICode AT2G19540
Description Transducin family protein / WD-40 repeat family protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G19540 Transducin family protein / WD-40 repeat family protein 1 0.33 -0.32
2 AT2G32220 Ribosomal L27e protein family 0.91 0.35 -0.31
3 AT2G44860 Ribosomal protein L24e family protein 0.89 0.32 -0.31
4 AT3G25940 TFIIB zinc-binding protein 0.88 0.3 -0.31
5 AT2G45710 Zinc-binding ribosomal protein family protein 0.87 0.32 -0.33
6 AT1G22270 Trm112p-like protein 0.87 0.31 -0.28
7 AT3G05560 Ribosomal L22e protein family 0.85 0.32 -0.32
8 AT3G52040 unknown protein; Has 37 Blast hits to 37 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.85 0.3 -0.3
9 AT1G31660 CONTAINS InterPro DOMAIN/s: Bystin (InterPro:IPR007955);
Has 475 Blast hits to 467 proteins in 210 species: Archae -
0; Bacteria - 9; Metazoa - 155; Fungi - 139; Plants - 55;
Viruses - 0; Other Eukaryotes - 117 (source: NCBI BLink).		 0.85 0.31 -0.31
10 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.84 0.32 -0.31
11 AT2G27530 Ribosomal protein L1p/L10e family PIGGYBACK1 0.84 0.3 -0.3
12 AT2G04520 Nucleic acid-binding, OB-fold-like protein 0.84 0.31 -0.33
13 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.84 0.34 -0.33
14 AT5G41970 Metal-dependent protein hydrolase 0.83 0.32 -0.29
15 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.83 0.32 -0.35
16 AT4G01560 Ribosomal RNA processing Brix domain protein maternal effect embryo arrest 49 0.83 0.32 -0.33
17 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.83 0.32 -0.31
18 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1		 0.83 0.31 -0.3
19 AT1G54770 Fcf2 pre-rRNA processing protein 0.82 0.31 -0.33
20 AT4G02220 zinc finger (MYND type) family protein / programmed cell
death 2 C-terminal domain-containing protein		 0.82 0.32 -0.3
21 AT3G57000 nucleolar essential protein-related 0.82 0.32 -0.29
22 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.82 0.3 -0.3
23 AT2G46230 PIN domain-like family protein 0.82 0.32 -0.31
24 AT5G57280 S-adenosyl-L-methionine-dependent methyltransferases
superfamily protein		 root initiation defective 2 0.82 0.31 -0.31
25 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.82 0.33 -0.3
26 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.82 0.31 -0.31
27 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.82 0.32 -0.33
28 AT2G42710 Ribosomal protein L1p/L10e family 0.81 0.31 -0.31
29 AT5G11760 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function DUF1764, eukaryotic (InterPro:IPR013885);
Has 1807 Blast hits to 1807 proteins in 277 species: Archae
- 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants -
385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI
BLink).		 0.81 0.32 -0.31
30 AT2G19480 nucleosome assembly protein 1;2 nucleosome assembly protein 1;2,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP A 2		 0.81 0.33 -0.3
31 AT3G11400 eukaryotic translation initiation factor 3G1 ATEIF3G1, eukaryotic translation
initiation factor 3G1		 0.81 0.31 -0.32
32 AT3G11710 lysyl-tRNA synthetase 1 lysyl-tRNA synthetase 1 0.8 0.33 -0.32
33 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).		 0.8 0.31 -0.31
34 AT1G13870 calmodulin binding;purine nucleotide binding AtKTI12, DEFORMED ROOTS AND LEAVES
1		 0.8 0.29 -0.33
35 AT2G02880 mucin-related 0.8 0.3 -0.32
36 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor		 0.79 0.3 -0.3
37 AT3G07230 wound-responsive protein-related 0.79 0.32 -0.33
38 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.79 0.33 -0.31
39 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3		 0.79 0.29 -0.33
40 AT2G36690 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.79 0.32 -0.31
41 AT4G02230 Ribosomal protein L19e family protein 0.79 0.32 -0.32
42 AT1G52930 Ribosomal RNA processing Brix domain protein 0.79 0.31 -0.33
43 AT4G18040 eukaryotic translation initiation factor 4E ARABIDOPSIS THALIANA EUKARYOTIC
TRANSLATION INITATION FACTOR 4E1,
CUCUMOVIRUS MULTIPLICATION 1,
eukaryotic translation initiation
factor 4E, eukaryotic translation
Initiation Factor 4E1		 0.79 0.32 -0.33
44 AT2G44510 CDK inhibitor P21 binding protein 0.79 0.31 -0.32
45 AT1G19240 unknown protein; Has 24 Blast hits to 24 proteins in 11
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.79 0.3 -0.32
46 AT5G02470 Transcription factor DP DPA 0.78 0.31 -0.31
47 AT5G58230 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS MULTICOPY SUPRESSOR OF
IRA1, MATERNAL EFFECT EMBRYO
ARREST 70, MULTICOPY SUPRESSOR OF
IRA1		 0.78 0.29 -0.32
48 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.78 0.32 -0.33
49 AT2G33845 Nucleic acid-binding, OB-fold-like protein 0.78 0.32 -0.34
50 AT4G12470 azelaic acid induced 1 azelaic acid induced 1 0.78 0.31 -0.31
51 AT2G46170 Reticulon family protein 0.78 0.31 -0.32
52 AT3G10730 SAD1/UNC-84 domain protein 2 ARABIDOPSIS SAD1/UNC-84 DOMAIN
PROTEIN 2, SAD1/UNC-84 domain
protein 2		 0.77 0.31 -0.32
53 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1		 0.77 0.31 -0.32
54 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog 0.77 0.29 -0.32
55 AT1G10550 xyloglucan:xyloglucosyl transferase 33 XYLOGLUCAN:XYLOGLUCOSYL
TRANSFERASE 33,
xyloglucan:xyloglucosyl
transferase 33		 0.77 0.32 -0.31
56 AT5G20920 eukaryotic translation initiation factor 2 beta subunit eukaryotic translation initiation
factor 2 beta subunit, embryo
defective 1401		 0.77 0.31 -0.32
57 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.77 0.33 -0.31
58 AT4G39280 phenylalanyl-tRNA synthetase, putative /
phenylalanine--tRNA ligase, putative		 0.77 0.3 -0.33
59 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.77 0.31 -0.31
60 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.77 0.34 -0.32
61 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 0.77 0.3 -0.31
62 AT3G22320 Eukaryotic rpb5 RNA polymerase subunit family protein ATRPABC24.3, NRPB5, NRPD5, RNA
POLYMERASE II FIFTH LARGEST
SUBUNIT, A		 0.77 0.29 -0.32
63 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.77 0.31 -0.3
64 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.77 0.3 -0.28
65 AT1G80000 CASC3/Barentsz eIF4AIII binding 0.77 0.32 -0.32
66 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C		 0.77 0.32 -0.31
67 AT4G19160 unknown protein; Has 30201 Blast hits to 17322 proteins in
780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.74 0.29 -0.32
68 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.72 0.31 -0.32
69 AT4G23980 auxin response factor 9 auxin response factor 9 -0.69 0.3 -0.3
70 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4		 -0.68 0.32 -0.32
71 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.68 0.29 -0.33
72 AT1G14790 RNA-dependent RNA polymerase 1 ATRDRP1, RNA-dependent RNA
polymerase 1		 -0.68 0.31 -0.34
73 AT5G42600 marneral synthase marneral synthase -0.63 0.31 -0.31
74 AT1G68710 ATPase E1-E2 type family protein / haloacid
dehalogenase-like hydrolase family protein		 -0.63 0.3 -0.33
75 AT1G59640 BIG PETAL P BIG PETAL, BIG PETAL P, BIG PETAL
UB, ZCW32		 -0.63 0.31 -0.31
76 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.63 0.33 -0.3
77 AT5G64530 xylem NAC domain 1 Arabidopsis NAC domain containing
protein 104, xylem NAC domain 1		 -0.61 0.32 -0.28
78 AT1G58230 binding -0.61 0.3 -0.31
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
79 C0054 Agmatine - Agmatine putrescine biosynthesis I,
putrescine biosynthesis II,
superpathway of polyamine biosynthesis 		-0.69 0.32 -0.32 C0054
80 C0032 3-Phosphoglyceric acid 3-Phospho-(R)-glyceric acid 3-Phosphoglycerate glycolysis I,
gluconeogenesis I,
Calvin-Benson-Bassham cycle,
sucrose biosynthesis I,
serine biosynthesis,
photorespiration,
Rubisco shunt,
glycolysis IV (plant cytosol) 		-0.68 0.44 -0.43 C0032
81 C0260 Tyrosine L-(-)-Tyrosine L-Tyrosine tyrosine biosynthesis II,
4-hydroxyphenylpyruvate biosynthesis,
tyrosine degradation I,
tyrosine biosynthesis I,
tRNA charging,
hydroxycinnamic acid tyramine amides biosynthesis 		-0.68 0.3 -0.31 C0260
82 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.67 0.32 -0.33 C0142
83 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.67 0.46 -0.44 C0053
84 C0099 Glucose-1-phosphate α,β-D-Glucose-1-phosphate α-D-Glucose-1-phosphate; β-D-Glucose-1-phosphate galactose degradation I (Leloir pathway) -0.66 0.45 -0.46 C0099
85 C0091 Fructose-1,6-bisphosphate D-Fructose-1,6-bisphosphate Fructose-1,6-bisphosphate gluconeogenesis I,
Calvin-Benson-Bassham cycle,
glycolysis IV (plant cytosol),
glycolysis I,
CA1P biosynthesis,
sucrose biosynthesis I 		-0.62 0.45 -0.45 C0091