AT2G38950 : -
Query Information
Cytoscape Web will replace the contents of this div with your graph.
AGICode AT2G38950
Description Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
Gene information
Help   
  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G38950 Transcription factor jumonji (jmj) family protein / zinc
finger (C5HC2 type) family protein		 1 0.32 -0.31
2 AT5G65250 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.66 0.31 -0.32
3 AT1G02475 Polyketide cyclase/dehydrase and lipid transport
superfamily protein		 0.62 0.3 -0.33
4 AT1G54920 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
membrane; EXPRESSED IN: 23 plant structures; EXPRESSED
DURING: 15 growth stages; Has 30201 Blast hits to 17322
proteins in 780 species: Archae - 12; Bacteria - 1396;
Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0;
Other Eukaryotes - 2996 (source: NCBI BLink).		 0.62 0.32 -0.32
5 AT4G26510 uridine kinase-like 4 uridine kinase-like 4 0.61 0.33 -0.32
6 AT1G24040 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.6 0.33 -0.3
7 AT4G26500 chloroplast sulfur E ARABIDOPSIS THALIANA SULFUR E,
chloroplast sulfur E, MBRYO
DEFECTIVE 1374, SULFUR E 1		 0.6 0.33 -0.31
8 AT1G31780 CONTAINS InterPro DOMAIN/s: Conserved oligomeric complex
COG6 (InterPro:IPR010490); Has 384 Blast hits to 379
proteins in 190 species: Archae - 0; Bacteria - 4; Metazoa
- 151; Fungi - 156; Plants - 42; Viruses - 0; Other
Eukaryotes - 31 (source: NCBI BLink).		 0.6 0.34 -0.33
9 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.59 0.32 -0.32
10 AT5G36210 alpha/beta-Hydrolases superfamily protein 0.58 0.3 -0.33
11 AT1G60220 UB-like protease 1D OVERLY TOLERANT TO SALT 1, UB-like
protease 1D		 0.57 0.32 -0.31
12 AT5G66060 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase
superfamily protein		 0.57 0.32 -0.28
13 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 0.56 0.32 -0.31
14 AT4G21090 MITOCHONDRIAL FERREDOXIN 2 ARABIDOPSIS MITOCHONDRIAL
FERREDOXIN 2, MITOCHONDRIAL
FERREDOXIN 2		 0.56 0.35 -0.31
15 AT3G59790 MAP kinase 10 MAP kinase 10, MAP kinase 10 0.56 0.31 -0.32
16 AT4G20230 Terpenoid cyclases/Protein prenyltransferases superfamily
protein		 -0.54 0.32 -0.32
17 AT4G29650 Cytidine/deoxycytidylate deaminase family protein 0.54 0.3 -0.31
18 AT1G74630 Tetratricopeptide repeat (TPR)-like superfamily protein 0.54 0.3 -0.32
19 AT3G25110 fatA acyl-ACP thioesterase fatA acyl-ACP thioesterase, fatA
acyl-ACP thioesterase		 -0.54 0.34 -0.33
20 AT3G56860 UBP1-associated protein 2A UBP1-associated protein 2A 0.54 0.3 -0.3
21 AT2G11110 transposable element gene 0.53 0.31 -0.29
22 AT5G36160 Tyrosine transaminase family protein 0.53 0.33 -0.32
23 AT1G07850 Protein of unknown function (DUF604) 0.53 0.31 -0.34
24 AT4G01530 transposable element gene 0.53 0.3 -0.31
25 AT5G06540 Pentatricopeptide repeat (PPR) superfamily protein 0.53 0.3 -0.3
26 AT4G35520 MUTL protein homolog 3 ATMLH3, MUTL protein homolog 3 -0.52 0.33 -0.31
27 AT5G40250 RING/U-box superfamily protein -0.52 0.32 -0.31
28 AT5G03510 C2H2-type zinc finger family protein -0.52 0.33 -0.29
29 AT3G60940 Putative endonuclease or glycosyl hydrolase 0.52 0.33 -0.31
30 AT5G24100 Leucine-rich repeat protein kinase family protein -0.52 0.32 -0.32
31 AT1G20823 RING/U-box superfamily protein -0.52 0.31 -0.29
32 AT1G26620 Plant protein of unknown function (DUF863) 0.52 0.3 -0.31
33 AT1G32300 D-arabinono-1,4-lactone oxidase family protein -0.51 0.33 -0.31
34 AT1G67670 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G24405.1); Has 18 Blast hits
to 18 proteins in 6 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 18; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 0.51 0.32 -0.3
35 AT3G23270 Regulator of chromosome condensation (RCC1) family with
FYVE zinc finger domain		 0.51 0.3 -0.32
36 AT2G30070 potassium transporter 1 potassium transporter 1, ATKT1P,
ATKUP1, potassium transporter 1,
POTASSIUM UPTAKE TRANSPORTER 1		 0.51 0.29 -0.31
37 AT3G50860 Clathrin adaptor complex small chain family protein 0.51 0.34 -0.3
38 AT1G27240 Paired amphipathic helix (PAH2) superfamily protein 0.51 0.31 -0.32
39 AT5G07230 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein		 0.5 0.32 -0.33
40 AT1G62170 Serine protease inhibitor (SERPIN) family protein 0.5 0.3 -0.31
41 AT4G04460 Saposin-like aspartyl protease family protein -0.5 0.31 -0.33
42 AT1G29230 CBL-interacting protein kinase 18 ATCIPK18, WPL4-LIKE 1,
CBL-interacting protein kinase 18,
SNF1-RELATED PROTEIN KINASE 3.20,
WPL4-LIKE 1		 0.49 0.33 -0.31
43 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.49 0.29 -0.3
44 AT3G49930 C2H2 and C2HC zinc fingers superfamily protein -0.49 0.32 -0.31
45 AT3G25630 transposable element gene -0.48 0.33 -0.34
46 AT3G60170 transposable element gene -0.46 0.29 -0.3
47 AT5G28490 Protein of unknown function (DUF640) LIGHT-DEPENDENT SHORT HYPOCOTYLS
1, ORGAN BOUNDARY 2		 -0.46 0.31 -0.3
48 AT3G30820 Arabidopsis retrotransposon ORF-1 protein -0.46 0.29 -0.31
49 AT5G51580 unknown protein; Has 8 Blast hits to 6 proteins in 4
species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0;
Plants - 5; Viruses - 0; Other Eukaryotes - 1 (source: NCBI
BLink).		 -0.45 0.31 -0.32
50 AT3G56000 cellulose synthase like A14 ARABIDOPSIS THALIANA CELLULOSE
SYNTHASE LIKE A14, cellulose
synthase like A14		 -0.44 0.32 -0.31
51 AT4G01340 CHP-rich zinc finger protein-related -0.44 0.33 -0.32
52 AT1G64780 ammonium transporter 1;2 ammonium transporter 1;2, ammonium
transporter 1;2		 -0.44 0.32 -0.32
53 AT3G44350 NAC domain containing protein 61 NAC domain containing protein 61,
NAC domain containing protein 61		 -0.43 0.33 -0.32
54 AT3G11370 Cysteine/Histidine-rich C1 domain family protein -0.42 0.33 -0.31
55 AT2G05660 transposable element gene -0.41 0.3 -0.32
Metabolite information
Help   
  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
56 C0186 NAD - NAD+ ammonia assimilation cycle II,
aspartate degradation II,
adenosine nucleotides degradation I,
plant sterol biosynthesis II,
UDP-D-xylose and UDP-D-glucuronate biosynthesis,
NAD biosynthesis I (from aspartate),
ethanol degradation IV (peroxisomal),
abscisic acid biosynthesis,
palmitate biosynthesis II (bacteria and plants),
zeaxanthin biosynthesis,
sucrose degradation to ethanol and lactate (anaerobic),
glutamate degradation IV,
stearate biosynthesis II (plants),
guanosine nucleotides degradation II,
glutamate degradation I,
mannitol degradation II,
glycerol-3-phosphate shuttle,
2-ketoglutarate dehydrogenase complex,
arginine degradation I (arginase pathway),
aerobic respiration (alternative oxidase pathway),
branched-chain alpha-keto acid dehydrogenase complex,
4-aminobutyrate degradation IV,
glycolysis I,
glycine cleavage complex,
lysine degradation II,
fatty acid beta-oxidation II (core pathway),
nitrate reduction II (assimilatory),
TCA cycle variation V (plant),
leucine degradation I,
thiamine biosynthesis II,
acetaldehyde biosynthesis I,
sorbitol degradation I,
glutamine biosynthesis III,
aerobic respiration (cytochrome c),
ethanol degradation I,
ascorbate biosynthesis I (L-galactose pathway),
glycolysis IV (plant cytosol),
benzoate biosynthesis II (CoA-independent, non-beta-oxidative),
siroheme biosynthesis,
TCA cycle variation III (eukaryotic),
isoleucine degradation I,
pyridine nucleotide cycling (plants),
tyrosine biosynthesis I,
gluconeogenesis I,
glycine betaine biosynthesis III (plants),
traumatin and (Z)-3-hexen-1-yl acetate biosynthesis,
NAD/NADH phosphorylation and dephosphorylation,
guanosine nucleotides degradation I,
purine nucleotides de novo biosynthesis II,
acetyl-CoA biosynthesis (from pyruvate),
serine biosynthesis,
photorespiration,
histidine biosynthesis,
glyoxylate cycle,
jasmonic acid biosynthesis,
alanine degradation II (to D-lactate),
a ubiquinone + NADH + H+ -> a ubiquinol + NAD+,
putrescine degradation IV,
brassinosteroid biosynthesis III,
fatty acid elongation -- saturated,
pyruvate fermentation to ethanol II,
beta-alanine biosynthesis II,
4-hydroxybenzoate biosynthesis V,
plant sterol biosynthesis,
urate biosynthesis/inosine 5'-phosphate degradation,
phenylalanine degradation III,
glutamate biosynthesis IV,
leucine biosynthesis,
fatty acid alpha-oxidation,
a ubiquinone + NADH + H+ -> NAD+ + a ubiquinol,
Fe(III)-reduction and Fe(II) transport,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
phenylethanol biosynthesis,
pyruvate fermentation to lactate,
superpathway of glyoxylate cycle and fatty acid degradation,
fatty acid omega-oxidation,
galactose degradation III,
ethanol degradation II (cytosol),
sucrose biosynthesis I,
valine degradation I,
folate transformations II 		0.68 0.43 -0.47 C0186
57 C0154 Monogalactosyldiacylgycerol-36:3 - a Monogalactosyldiacylgycerol glycolipid biosynthesis,
triacylglycerol degradation,
linoleate biosynthesis I,
glutathione redox reactions I 		-0.54 0.31 -0.33
58 C0013 N2-Acetyl-Ornithine N2-Acetyl-L-ornithine N-acetyl-L-ornithine arginine biosynthesis II (acetyl cycle),
ornithine biosynthesis 		0.54 0.29 -0.32 C0013