AT2G26060 : embryo defective 1345
Query Information
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AGICode AT2G26060
Description Transducin/WD40 repeat-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G26060 Transducin/WD40 repeat-like superfamily protein embryo defective 1345 1 0.33 -0.32
2 AT2G31410 unknown protein; Has 1719 Blast hits to 1091 proteins in
184 species: Archae - 5; Bacteria - 24; Metazoa - 559;
Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes -
769 (source: NCBI BLink).		 0.87 0.32 -0.32
3 AT5G24840 tRNA (guanine-N-7) methyltransferase 0.84 0.32 -0.33
4 AT1G08580 unknown protein; Has 39 Blast hits to 39 proteins in 15
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source:
NCBI BLink).		 0.84 0.33 -0.31
5 AT3G62840 Small nuclear ribonucleoprotein family protein 0.82 0.3 -0.33
6 AT1G51510 RNA-binding (RRM/RBD/RNP motifs) family protein Y14 0.81 0.31 -0.31
7 AT3G12860 NOP56-like pre RNA processing ribonucleoprotein 0.81 0.33 -0.31
8 AT2G45860 unknown protein; Has 32 Blast hits to 32 proteins in 13
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).		 0.8 0.31 -0.32
9 AT3G07170 Sterile alpha motif (SAM) domain-containing protein 0.8 0.33 -0.3
10 AT1G22270 Trm112p-like protein 0.8 0.31 -0.33
11 AT3G25940 TFIIB zinc-binding protein 0.79 0.3 -0.3
12 AT5G64900 precursor of peptide 1 ARABIDOPSIS THALIANA PEPTIDE 1,
PEPTIDE 1, precursor of peptide 1		 -0.79 0.31 -0.32
13 AT5G19320 RAN GTPase activating protein 2 RAN GTPase activating protein 2 0.79 0.32 -0.31
14 AT3G62010 unknown protein; LOCATED IN: cellular_component unknown;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15
growth stages; Has 553 Blast hits to 216 proteins in 93
species: Archae - 0; Bacteria - 124; Metazoa - 193; Fungi -
58; Plants - 108; Viruses - 0; Other Eukaryotes - 70
(source: NCBI BLink).		 -0.79 0.33 -0.32
15 AT2G44510 CDK inhibitor P21 binding protein 0.79 0.32 -0.32
16 AT2G34570 PIN domain-like family protein maternal effect embryo arrest 21 0.78 0.29 -0.31
17 AT5G41600 VIRB2-interacting protein 3 VIRB2-interacting protein 3,
Reticulan like protein B4		 0.77 0.34 -0.33
18 AT1G13690 ATPase E1 ATPase E1 0.77 0.33 -0.31
19 AT1G74560 NAP1-related protein 1 NAP1-related protein 1 0.77 0.31 -0.33
20 AT1G15420 CONTAINS InterPro DOMAIN/s: Small-subunit processome, Utp12
(InterPro:IPR007148); Has 764 Blast hits to 656 proteins in
193 species: Archae - 0; Bacteria - 42; Metazoa - 237;
Fungi - 154; Plants - 85; Viruses - 23; Other Eukaryotes -
223 (source: NCBI BLink).		 0.77 0.3 -0.32
21 AT4G31580 serine/arginine-rich 22 RS-containing zinc finger protein
22, RS-containing zinc finger
protein 22, RS-CONTAINING ZINC
FINGER PROTEIN 22,
serine/arginine-rich 22, SRZ22		 0.77 0.34 -0.32
22 AT5G04600 RNA-binding (RRM/RBD/RNP motifs) family protein 0.77 0.3 -0.29
23 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.77 0.33 -0.31
24 AT1G01940 Cyclophilin-like peptidyl-prolyl cis-trans isomerase family
protein		 0.77 0.32 -0.3
25 AT3G26410 methyltransferases;nucleic acid binding AtTRM11, tRNA modification 11 0.76 0.33 -0.31
26 AT2G46230 PIN domain-like family protein 0.76 0.32 -0.33
27 AT3G49990 unknown protein; Has 1524 Blast hits to 1298 proteins in
225 species: Archae - 9; Bacteria - 84; Metazoa - 474;
Fungi - 184; Plants - 98; Viruses - 17; Other Eukaryotes -
658 (source: NCBI BLink).		 0.76 0.31 -0.32
28 AT1G75990 PAM domain (PCI/PINT associated module) protein 0.76 0.32 -0.33
29 AT2G47640 Small nuclear ribonucleoprotein family protein 0.76 0.32 -0.31
30 AT1G26840 origin recognition complex protein 6 ARABIDOPSIS THALIANA ORIGIN
RECOGNITION COMPLEX PROTEIN 6,
origin recognition complex protein
6		 0.76 0.34 -0.32
31 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein 0.75 0.31 -0.33
32 AT5G22850 Eukaryotic aspartyl protease family protein -0.75 0.32 -0.32
33 AT2G40780 Nucleic acid-binding, OB-fold-like protein 0.75 0.3 -0.31
34 AT2G07340 PREFOLDIN 1 PREFOLDIN 1 0.75 0.3 -0.29
35 AT1G18800 NAP1-related protein 2 NAP1-related protein 2 0.75 0.33 -0.32
36 AT1G76300 snRNP core protein SMD3 snRNP core protein SMD3 0.74 0.32 -0.33
37 AT5G67630 P-loop containing nucleoside triphosphate hydrolases
superfamily protein		 0.74 0.33 -0.3
38 AT1G32440 plastidial pyruvate kinase 3 plastidial pyruvate kinase 3 0.73 0.32 -0.31
39 AT2G31360 16:0delta9 desaturase 2 16:0delta9 desaturase 2,
16:0delta9 desaturase 2		 0.73 0.31 -0.31
40 AT1G08780 ABI3-interacting protein 3 ABI3-interacting protein 3,
PREFOLDIN 4		 0.73 0.31 -0.31
41 AT1G10430 protein phosphatase 2A-2 protein phosphatase 2A-2 0.73 0.33 -0.32
42 AT5G22310 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G11590.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 0.73 0.32 -0.3
43 AT2G17230 EXORDIUM like 5 EXORDIUM like 5 0.73 0.29 -0.33
44 AT5G48870 Small nuclear ribonucleoprotein family protein SUPERSENSITIVE TO ABA AND DROUGHT
1		 0.73 0.32 -0.3
45 AT3G53500 RNA-binding (RRM/RBD/RNP motifs) family protein with
retrovirus zinc finger-like domain		 arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32,
arginine/serine-rich zinc
knuckle-containing protein 32		 0.73 0.32 -0.34
46 AT4G38060 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits
to 63 proteins in 13 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.72 0.32 -0.31
47 AT3G14920 Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A
protein		 -0.72 0.32 -0.31
48 AT3G02300 Regulator of chromosome condensation (RCC1) family protein -0.71 0.32 -0.31
49 AT3G17980 Calcium-dependent lipid-binding (CaLB domain) family
protein		 Arabidopsis thaliana C2 domain, C2
domain		 -0.71 0.31 -0.3
50 AT1G17360 BEST Arabidopsis thaliana protein match is:
COP1-interacting protein-related (TAIR:AT1G72410.1); Has
9949 Blast hits to 7480 proteins in 576 species: Archae -
12; Bacteria - 1007; Metazoa - 3636; Fungi - 982; Plants -
444; Viruses - 50; Other Eukaryotes - 3818 (source: NCBI
BLink).		 -0.71 0.32 -0.31
51 AT3G54290 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
N-terminal protein myristoylation; LOCATED IN: chloroplast;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Haemerythrin/HHE
cation-binding motif (InterPro:IPR012312); Has 59 Blast
hits to 59 proteins in 14 species: Archae - 0; Bacteria -
2; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other
Eukaryotes - 1 (source: NCBI BLink).		 -0.71 0.32 -0.32
52 AT5G25520 SPOC domain / Transcription elongation factor S-II protein -0.7 0.3 -0.33
53 AT1G76460 RNA-binding (RRM/RBD/RNP motifs) family protein -0.69 0.33 -0.34
54 AT5G13760 Plasma-membrane choline transporter family protein -0.69 0.33 -0.32
55 AT1G28320 protease-related DEG15 -0.68 0.32 -0.33
56 AT1G24330 ARM repeat superfamily protein -0.68 0.3 -0.33
57 AT1G77420 alpha/beta-Hydrolases superfamily protein -0.68 0.31 -0.31
58 AT5G46340 O-acetyltransferase family protein REDUCED WALL ACETYLATION 1 -0.68 0.32 -0.3
59 AT3G27670 ARM repeat superfamily protein RESURRECTION1 -0.67 0.33 -0.32
60 AT2G14520 CBS domain-containing protein with a domain of unknown
function (DUF21)		 -0.67 0.33 -0.3
61 AT1G17980 poly(A) polymerase 1 poly(A) polymerase 1 -0.67 0.32 -0.32
62 AT5G50170 C2 calcium/lipid-binding and GRAM domain containing protein -0.67 0.3 -0.32
63 AT3G09600 Homeodomain-like superfamily protein LHY-CCA1-LIKE5, REVEILLE 8 -0.67 0.29 -0.33
64 AT1G80950 Phospholipid/glycerol acyltransferase family protein -0.66 0.31 -0.33
65 AT4G04610 APS reductase 1 APR, APS reductase 1, ATAPR1, PAPS
REDUCTASE HOMOLOG 19		 -0.66 0.31 -0.34
66 AT5G19310 Homeotic gene regulator -0.66 0.33 -0.32
67 AT2G21410 vacuolar proton ATPase A2 vacuolar proton ATPase A2 -0.65 0.34 -0.3
68 AT1G66350 RGA-like 1 RGL, RGA-like 1 -0.65 0.3 -0.33
69 AT4G32850 nuclear poly(a) polymerase nuclear poly(a) polymerase,
poly(A) polymerase IV		 -0.65 0.33 -0.32
70 AT2G36960 TSL-kinase interacting protein 1 TSL-kinase interacting protein 1 -0.65 0.31 -0.31
71 AT1G60260 beta glucosidase 5 beta glucosidase 5 -0.65 0.32 -0.32
72 AT1G54680 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT5G27290.1); Has 200 Blast hits to 200 proteins in
57 species: Archae - 0; Bacteria - 59; Metazoa - 0; Fungi -
0; Plants - 127; Viruses - 0; Other Eukaryotes - 14
(source: NCBI BLink).		 -0.64 0.33 -0.3
73 AT5G45370 nodulin MtN21 /EamA-like transporter family protein -0.64 0.35 -0.33
74 AT3G63180 TIC-like TICKLE, TIC-like -0.64 0.3 -0.32
75 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE		 -0.64 0.32 -0.29
76 AT1G17340 Phosphoinositide phosphatase family protein -0.64 0.32 -0.32
77 AT1G24190 SIN3-like 3 ARABIDOPSIS THALIANA SIN3 HOMOLOG,
ARABIDOPSIS THALIANA SIN3 HOMOLOG,
SIN3-like 3		 -0.64 0.32 -0.31
78 AT4G29790 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT2G19390.1); Has 538 Blast hits
to 357 proteins in 124 species: Archae - 0; Bacteria - 74;
Metazoa - 109; Fungi - 58; Plants - 105; Viruses - 2; Other
Eukaryotes - 190 (source: NCBI BLink).		 -0.63 0.32 -0.31
79 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L		 -0.63 0.29 -0.31
80 AT5G42370 Calcineurin-like metallo-phosphoesterase superfamily
protein		 -0.63 0.32 -0.32
81 AT5G51290 Diacylglycerol kinase family protein -0.63 0.32 -0.31
82 AT5G67160 HXXXD-type acyl-transferase family protein ENHANCED PSEUDOMONAS SUSCEPTIBILTY
1		 -0.63 0.32 -0.3
83 AT4G00800 transducin family protein / WD-40 repeat family protein SETH5 -0.63 0.32 -0.3
84 AT5G24350 CONTAINS InterPro DOMAIN/s: Secretory pathway Sec39
(InterPro:IPR013244); Has 1807 Blast hits to 1807 proteins
in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736;
Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes -
339 (source: NCBI BLink).		 -0.62 0.31 -0.32
85 AT4G34310 alpha/beta-Hydrolases superfamily protein -0.62 0.32 -0.33
86 AT5G54350 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; LOCATED IN: chloroplast; BEST
Arabidopsis thaliana protein match is: C2H2-like zinc
finger protein (TAIR:AT5G54360.1); Has 1807 Blast hits to
1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).		 -0.62 0.32 -0.31
87 AT3G08850 HEAT repeat ;WD domain, G-beta repeat protein protein ATRAPTOR1B, RAPTOR1, RAPTOR1B -0.62 0.32 -0.3
88 AT2G35050 Protein kinase superfamily protein with
octicosapeptide/Phox/Bem1p domain		 -0.62 0.32 -0.29
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
89 C0053 ADP - ADP phosphatidylcholine biosynthesis I,
mannitol degradation II,
lipid IVA biosynthesis,
stachyose degradation,
Rubisco shunt,
copper transport II,
glycerol degradation IV,
chorismate biosynthesis,
folate polyglutamylation II,
galactose degradation III,
D-myo-inositol (1,4,5)-trisphosphate biosynthesis,
UDP-L-arabinose biosynthesis II (from L-arabinose),
cadmium transport I,
folate polyglutamylation,
coenzyme A biosynthesis,
sulfate activation for sulfonation,
1,4-dihydroxy-2-naphthoate biosynthesis II (plants),
pyrimidine deoxyribonucleotides de novo biosynthesis I,
galactose degradation II,
inosine-5'-phosphate biosynthesis II,
ribose degradation,
acetyl-CoA biosynthesis (from citrate),
inositol pyrophosphates biosynthesis,
fatty acid biosynthesis initiation I,
xylose degradation I,
adenine and adenosine salvage VI,
TCA cycle variation III (eukaryotic),
tetrahydrofolate biosynthesis II,
phosphatidylethanolamine biosynthesis II,
pyridoxal 5'-phosphate salvage pathway,
citrulline biosynthesis,
trans-zeatin biosynthesis,
glutamine biosynthesis I,
arginine biosynthesis II (acetyl cycle),
L-Ndelta-acetylornithine biosynthesis,
mevalonate pathway I,
methionine biosynthesis II,
trehalose degradation II (trehalase),
citrulline degradation,
methionine salvage pathway,
TCA cycle variation V (plant),
chlorophyllide a biosynthesis I,
starch degradation I,
methylerythritol phosphate pathway,
pyridine nucleotide cycling (plants),
ceramide degradation,
biotin-carboxyl carrier protein assembly,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
UDP-D-galacturonate biosynthesis II (from D-galacturonate),
asparagine biosynthesis III (tRNA-dependent),
superpathway of glyoxylate cycle and fatty acid degradation,
NAD/NADH phosphorylation and dephosphorylation,
1D-myo-inositol hexakisphosphate biosynthesis V (from Ins(1,3,4)P3),
galactose degradation I (Leloir pathway),
uridine-5'-phosphate biosynthesis,
lipid-dependent phytate biosynthesis II (via Ins(1,3,4)P3),
sucrose degradation III,
lysine biosynthesis VI,
sphingolipid biosynthesis (plants),
choline biosynthesis I,
GDP-glucose biosynthesis,
photorespiration,
gamma-glutamyl cycle (plant pathway),
5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
thiamine biosynthesis II,
proline biosynthesis III,
glutathione biosynthesis,
folate transformations II,
ornithine biosynthesis,
diphthamide biosynthesis,
S-methyl-5'-thioadenosine degradation I,
starch biosynthesis,
arginine biosynthesis I,
homoserine biosynthesis,
flavin biosynthesis I (bacteria and plants),
sucrose biosynthesis I,
leucine degradation I,
glycolysis I,
pyrimidine ribonucleotides interconversion,
1D-myo-inositol hexakisphosphate biosynthesis III (Spirodela polyrrhiza),
glycolysis IV (plant cytosol),
Calvin-Benson-Bassham cycle,
UDP-D-glucuronate biosynthesis (from myo-inositol),
guanine and guanosine salvage III,
glutamine biosynthesis III,
L-glutamine biosynthesis II (tRNA-dependent),
GDP-L-fucose biosynthesis II (from L-fucose),
nitrate reduction II (assimilatory),
ammonia assimilation cycle II,
gluconeogenesis I,
threonine biosynthesis from homoserine,
mannose degradation,
urea cycle,
lipid-dependent phytate biosynthesis I (via Ins(1,4,5)P3),
biotin biosynthesis II 		-0.66 0.43 -0.44 C0053
90 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.65 0.29 -0.33 C0142