AGICode | AT2G45860 |
Description | unknown protein; Has 32 Blast hits to 32 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G45860 | unknown protein; Has 32 Blast hits to 32 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
1 | 0.33 | -0.31 | |||
2 | AT1G01940 | Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein |
0.88 | 0.3 | -0.32 | |||
3 | AT1G04480 | Ribosomal protein L14p/L23e family protein | 0.87 | 0.3 | -0.3 | |||
4 | AT4G27380 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.87 | 0.3 | -0.34 | |||
5 | AT5G20160 | Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein | 0.85 | 0.31 | -0.31 | |||
6 | AT2G45710 | Zinc-binding ribosomal protein family protein | 0.84 | 0.31 | -0.32 | |||
7 | AT5G10360 | Ribosomal protein S6e | embryo defective 3010, Ribosomal protein small subunit 6b |
0.84 | 0.31 | -0.3 | ||
8 | AT3G25940 | TFIIB zinc-binding protein | 0.83 | 0.33 | -0.32 | |||
9 | AT2G44120 | Ribosomal protein L30/L7 family protein | 0.83 | 0.3 | -0.34 | |||
10 | AT5G41010 | DNA directed RNA polymerase, 7 kDa subunit | NRPB12, NRPD12, NRPE12 | 0.83 | 0.32 | -0.29 | ||
11 | AT2G27720 | 60S acidic ribosomal protein family | 0.83 | 0.32 | -0.29 | |||
12 | AT4G38100 | unknown protein; LOCATED IN: chloroplast thylakoid membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G01150.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.83 | 0.32 | -0.31 | |||
13 | AT1G22780 | Ribosomal protein S13/S18 family | POINTED FIRST LEAVES, POINTED FIRST LEAVES 1, 40S RIBOSOMAL PROTEIN S18 |
0.83 | 0.34 | -0.31 | ||
14 | AT2G44860 | Ribosomal protein L24e family protein | 0.83 | 0.32 | -0.32 | |||
15 | AT1G48830 | Ribosomal protein S7e family protein | 0.83 | 0.35 | -0.31 | |||
16 | AT3G61620 | 3'-5'-exoribonuclease family protein | RRP41 | 0.83 | 0.32 | -0.31 | ||
17 | AT2G31410 | unknown protein; Has 1719 Blast hits to 1091 proteins in 184 species: Archae - 5; Bacteria - 24; Metazoa - 559; Fungi - 169; Plants - 192; Viruses - 1; Other Eukaryotes - 769 (source: NCBI BLink). |
0.83 | 0.3 | -0.31 | |||
18 | AT2G44510 | CDK inhibitor P21 binding protein | 0.83 | 0.31 | -0.32 | |||
19 | AT1G08580 | unknown protein; Has 39 Blast hits to 39 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). |
0.82 | 0.31 | -0.33 | |||
20 | AT1G75560 | zinc knuckle (CCHC-type) family protein | 0.82 | 0.3 | -0.31 | |||
21 | AT5G05470 | eukaryotic translation initiation factor 2 alpha subunit | ATEIF2-A2, eukaryotic translation initiation factor 2 alpha subunit, EIF2-A2 |
0.82 | 0.3 | -0.32 | ||
22 | AT4G18040 | eukaryotic translation initiation factor 4E | ARABIDOPSIS THALIANA EUKARYOTIC TRANSLATION INITATION FACTOR 4E1, CUCUMOVIRUS MULTIPLICATION 1, eukaryotic translation initiation factor 4E, eukaryotic translation Initiation Factor 4E1 |
0.82 | 0.33 | -0.33 | ||
23 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
0.82 | 0.32 | -0.35 | ||
24 | AT2G19740 | Ribosomal protein L31e family protein | 0.82 | 0.31 | -0.32 | |||
25 | AT5G64816 | unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). |
0.81 | 0.31 | -0.33 | |||
26 | AT5G57290 | 60S acidic ribosomal protein family | 0.81 | 0.31 | -0.31 | |||
27 | AT2G25670 | BEST Arabidopsis thaliana protein match is: copper ion binding (TAIR:AT4G32610.1); Has 43784 Blast hits to 26928 proteins in 1799 species: Archae - 86; Bacteria - 6347; Metazoa - 15971; Fungi - 5398; Plants - 1931; Viruses - 259; Other Eukaryotes - 13792 (source: NCBI BLink). |
0.81 | 0.33 | -0.32 | |||
28 | AT1G54770 | Fcf2 pre-rRNA processing protein | 0.8 | 0.3 | -0.31 | |||
29 | AT2G34570 | PIN domain-like family protein | maternal effect embryo arrest 21 | 0.8 | 0.31 | -0.32 | ||
30 | AT5G24840 | tRNA (guanine-N-7) methyltransferase | 0.8 | 0.32 | -0.29 | |||
31 | AT4G31985 | Ribosomal protein L39 family protein | 0.8 | 0.31 | -0.31 | |||
32 | AT2G31710 | Vacuolar ATPase assembly integral membrane protein VMA21-like domain |
0.8 | 0.32 | -0.31 | |||
33 | AT2G46230 | PIN domain-like family protein | 0.8 | 0.32 | -0.31 | |||
34 | AT1G51510 | RNA-binding (RRM/RBD/RNP motifs) family protein | Y14 | 0.8 | 0.31 | -0.29 | ||
35 | AT2G26060 | Transducin/WD40 repeat-like superfamily protein | embryo defective 1345 | 0.8 | 0.34 | -0.34 | ||
36 | AT2G47640 | Small nuclear ribonucleoprotein family protein | 0.8 | 0.33 | -0.33 | |||
37 | AT2G40780 | Nucleic acid-binding, OB-fold-like protein | 0.8 | 0.32 | -0.29 | |||
38 | AT2G39990 | eukaryotic translation initiation factor 2 | Arabidopsis thaliana eukaryotic translation initiation factor 3 subunit F, eukaryotic translation initiation factor 2, eukaryotic translation initiation factor 3 subunit F |
0.8 | 0.32 | -0.31 | ||
39 | AT1G69620 | ribosomal protein L34 | ribosomal protein L34 | 0.79 | 0.3 | -0.31 | ||
40 | AT1G10840 | translation initiation factor 3 subunit H1 | translation initiation factor 3 subunit H1 |
0.79 | 0.33 | -0.34 | ||
41 | AT3G02220 | unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). |
0.79 | 0.32 | -0.33 | |||
42 | AT1G31860 | histidine biosynthesis bifunctional protein (HISIE) | AT-IE, HISTIDINE BIOSYNTHESIS 2 | 0.79 | 0.32 | -0.32 | ||
43 | AT2G36160 | Ribosomal protein S11 family protein | 0.79 | 0.34 | -0.32 | |||
44 | AT1G74270 | Ribosomal protein L35Ae family protein | 0.79 | 0.36 | -0.34 | |||
45 | AT5G06360 | Ribosomal protein S8e family protein | 0.79 | 0.34 | -0.31 | |||
46 | AT1G10590 | Nucleic acid-binding, OB-fold-like protein | 0.79 | 0.32 | -0.31 | |||
47 | AT2G32220 | Ribosomal L27e protein family | 0.79 | 0.3 | -0.33 | |||
48 | AT3G22230 | Ribosomal L27e protein family | 0.79 | 0.31 | -0.33 | |||
49 | AT5G02470 | Transcription factor DP | DPA | 0.78 | 0.32 | -0.32 | ||
50 | AT5G23290 | prefoldin 5 | prefoldin 5 | 0.78 | 0.31 | -0.31 | ||
51 | AT5G02450 | Ribosomal protein L36e family protein | 0.78 | 0.32 | -0.29 | |||
52 | AT4G24440 | transcription initiation factor IIA gamma chain / TFIIA-gamma (TFIIA-S) |
0.77 | 0.31 | -0.3 | |||
53 | AT5G59180 | DNA-directed RNA polymerase II | NRPB7 | 0.77 | 0.31 | -0.31 | ||
54 | AT1G26470 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: regulation of transcription; LOCATED IN: nucleus, H4/H2A histone acetyltransferase complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: CT20 (InterPro:IPR012423); Has 60 Blast hits to 60 proteins in 27 species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 2; Plants - 30; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). |
0.77 | 0.32 | -0.33 | |||
55 | AT1G03360 | ribosomal RNA processing 4 | ribosomal RNA processing 4, ribosomal RNA processing 4 |
0.77 | 0.32 | -0.31 | ||
56 | AT1G55150 | DEA(D/H)-box RNA helicase family protein | 0.77 | 0.34 | -0.31 | |||
57 | AT2G19540 | Transducin family protein / WD-40 repeat family protein | 0.77 | 0.32 | -0.31 | |||
58 | AT1G22270 | Trm112p-like protein | 0.77 | 0.3 | -0.32 | |||
59 | AT2G40420 | Transmembrane amino acid transporter family protein | -0.75 | 0.3 | -0.33 | |||
60 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
-0.73 | 0.31 | -0.32 | ||
61 | AT1G03380 | homolog of yeast autophagy 18 (ATG18) G | homolog of yeast autophagy 18 (ATG18) G, homolog of yeast autophagy 18 (ATG18) G |
-0.73 | 0.29 | -0.31 | ||
62 | AT1G14790 | RNA-dependent RNA polymerase 1 | ATRDRP1, RNA-dependent RNA polymerase 1 |
-0.71 | 0.31 | -0.34 | ||
63 | AT5G22850 | Eukaryotic aspartyl protease family protein | -0.7 | 0.31 | -0.32 | |||
64 | AT2G25490 | EIN3-binding F box protein 1 | EIN3-binding F box protein 1, FBL6 | -0.69 | 0.29 | -0.32 | ||
65 | AT1G09510 | NAD(P)-binding Rossmann-fold superfamily protein | -0.66 | 0.32 | -0.32 | |||
66 | AT1G30200 | F-box family protein | -0.66 | 0.34 | -0.31 | |||
67 | AT5G43600 | ureidoglycolate amidohydrolase | ARABIDOPSIS THALIANA ALLANTOATE AMIDOHYDROLASE 2, ureidoglycolate amidohydrolase |
-0.66 | 0.31 | -0.33 | ||
68 | AT2G31960 | glucan synthase-like 3 | glucan synthase-like 3, ATGSL3, GSL03, glucan synthase-like 3 |
-0.65 | 0.3 | -0.32 | ||
69 | AT1G76460 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.65 | 0.33 | -0.32 | |||
70 | AT1G15060 | Uncharacterised conserved protein UCP031088, alpha/beta hydrolase |
-0.65 | 0.31 | -0.32 | |||
71 | AT2G35050 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain |
-0.65 | 0.34 | -0.31 | |||
72 | AT2G28290 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
CHROMATIN REMODELING COMPLEX SUBUNIT R 3, SPLAYED |
-0.64 | 0.31 | -0.29 | ||
73 | AT1G07080 | Thioredoxin superfamily protein | -0.64 | 0.33 | -0.3 | |||
74 | AT3G50220 | Protein of unknown function (DUF579) | IRREGULAR XYLEM 15 | -0.62 | 0.32 | -0.31 | ||
75 | AT5G64090 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Hyccin (InterPro:IPR018619); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G21050.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
-0.61 | 0.28 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
76 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
-0.68 | 0.32 | -0.32 | ||
77 | C0092 | Fumaric acid | - | Fumarate | citrulline-nitric oxide cycle, succinate + a ubiquinone -> a ubiquinol + fumarate, superpathway of glyoxylate cycle and fatty acid degradation, tyrosine degradation I, aerobic respiration (alternative oxidase pathway), inosine-5'-phosphate biosynthesis II, arginine biosynthesis I, TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), purine nucleotide metabolism (phosphotransfer and nucleotide modification), purine nucleotides de novo biosynthesis II, arginine biosynthesis II (acetyl cycle), urea cycle, aerobic respiration (cytochrome c) |
-0.63 | 0.31 | -0.32 | ||
78 | C0022 | 1,4-Butanediamine | - | Putrescine | spermine and spermidine degradation III, putrescine degradation IV, superpathway of polyamine biosynthesis, putrescine biosynthesis II, spermidine biosynthesis I, putrescine biosynthesis I |
-0.62 | 0.34 | -0.31 |