AGICode | AT2G41010 |
Description | calmodulin (CAM)-binding protein of 25 kDa |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT2G41010 | calmodulin (CAM)-binding protein of 25 kDa | calmodulin (CAM)-binding protein of 25 kDa, calmodulin (CAM)-binding protein of 25 kDa |
1 | 0.32 | -0.32 | ||
2 | AT1G58420 | Uncharacterised conserved protein UCP031279 | 0.78 | 0.33 | -0.3 | |||
3 | AT2G46400 | WRKY DNA-binding protein 46 | WRKY DNA-BINDING PROTEIN 46, WRKY DNA-binding protein 46 |
0.76 | 0.32 | -0.32 | ||
4 | AT2G24600 | Ankyrin repeat family protein | 0.75 | 0.32 | -0.32 | |||
5 | AT2G26190 | calmodulin-binding family protein | 0.74 | 0.31 | -0.32 | |||
6 | AT4G23810 | WRKY family transcription factor | ATWRKY53, WRKY53 | 0.73 | 0.32 | -0.33 | ||
7 | AT5G47230 | ethylene responsive element binding factor 5 | ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR- 5, ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 5, ethylene responsive element binding factor 5 |
0.73 | 0.34 | -0.33 | ||
8 | AT5G52750 | Heavy metal transport/detoxification superfamily protein | 0.72 | 0.3 | -0.29 | |||
9 | AT3G25600 | Calcium-binding EF-hand family protein | 0.72 | 0.32 | -0.29 | |||
10 | AT5G46710 | PLATZ transcription factor family protein | 0.72 | 0.32 | -0.32 | |||
11 | AT3G15530 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.72 | 0.31 | -0.29 | |||
12 | AT5G39670 | Calcium-binding EF-hand family protein | 0.7 | 0.32 | -0.3 | |||
13 | AT5G26920 | Cam-binding protein 60-like G | Cam-binding protein 60-like G | 0.7 | 0.31 | -0.32 | ||
14 | AT2G17040 | NAC domain containing protein 36 | NAC domain containing protein 36, NAC domain containing protein 36 |
0.68 | 0.31 | -0.31 | ||
15 | AT1G68720 | tRNA arginine adenosine deaminase | ARABIDOPSIS THALIANA TRNA ADENOSINE DEAMINASE A, tRNA arginine adenosine deaminase |
-0.68 | 0.32 | -0.3 | ||
16 | AT3G50950 | HOPZ-ACTIVATED RESISTANCE 1 | HOPZ-ACTIVATED RESISTANCE 1 | 0.68 | 0.3 | -0.31 | ||
17 | AT5G17350 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G03280.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.67 | 0.33 | -0.32 | |||
18 | AT4G39570 | Galactose oxidase/kelch repeat superfamily protein | 0.67 | 0.32 | -0.32 | |||
19 | AT5G52760 | Copper transport protein family | 0.67 | 0.32 | -0.32 | |||
20 | AT1G18740 | Protein of unknown function (DUF793) | 0.67 | 0.32 | -0.3 | |||
21 | AT4G25490 | C-repeat/DRE binding factor 1 | ATCBF1, C-repeat/DRE binding factor 1, DRE BINDING PROTEIN 1B |
0.66 | 0.32 | -0.31 | ||
22 | AT3G46600 | GRAS family transcription factor | 0.66 | 0.31 | -0.31 | |||
23 | AT1G61340 | F-box family protein | 0.65 | 0.33 | -0.31 | |||
24 | AT1G74440 | Protein of unknown function (DUF962) | 0.65 | 0.33 | -0.31 | |||
25 | AT1G15890 | Disease resistance protein (CC-NBS-LRR class) family | 0.65 | 0.31 | -0.29 | |||
26 | AT4G03390 | STRUBBELIG-receptor family 3 | STRUBBELIG-receptor family 3 | -0.65 | 0.32 | -0.28 | ||
27 | AT4G24570 | dicarboxylate carrier 2 | dicarboxylate carrier 2 | 0.65 | 0.32 | -0.3 | ||
28 | AT5G61600 | ethylene response factor 104 | ethylene response factor 104 | 0.65 | 0.32 | -0.32 | ||
29 | AT1G12470 | zinc ion binding | -0.64 | 0.28 | -0.34 | |||
30 | AT2G46190 | Mitochondrial glycoprotein family protein | 0.64 | 0.32 | -0.33 | |||
31 | AT4G24240 | WRKY DNA-binding protein 7 | ATWRKY7, WRKY DNA-binding protein 7 |
0.64 | 0.32 | -0.33 | ||
32 | AT1G12610 | Integrase-type DNA-binding superfamily protein | DWARF AND DELAYED FLOWERING 1 | 0.64 | 0.32 | -0.31 | ||
33 | AT1G77260 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
-0.64 | 0.34 | -0.33 | |||
34 | AT5G49050 | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to stress; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT2G47710.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). |
0.63 | 0.32 | -0.33 | |||
35 | AT1G51700 | DOF zinc finger protein 1 | DOF zinc finger protein 1, DOF zinc finger protein 1 |
0.63 | 0.3 | -0.32 | ||
36 | AT3G19540 | Protein of unknown function (DUF620) | 0.62 | 0.32 | -0.31 | |||
37 | AT5G16210 | HEAT repeat-containing protein | -0.62 | 0.31 | -0.33 | |||
38 | AT3G11820 | syntaxin of plants 121 | AT-SYR1, ATSYP121, SYNTAXIN RELATED PROTEIN 1, PENETRATION1, syntaxin of plants 121, SYNTAXIN RELATED PROTEIN 1 |
0.62 | 0.32 | -0.32 | ||
39 | AT5G19240 | Glycoprotein membrane precursor GPI-anchored | 0.62 | 0.32 | -0.3 | |||
40 | AT5G57220 | cytochrome P450, family 81, subfamily F, polypeptide 2 | cytochrome P450, family 81, subfamily F, polypeptide 2 |
0.62 | 0.31 | -0.31 | ||
41 | AT1G72060 | serine-type endopeptidase inhibitors | 0.61 | 0.31 | -0.29 | |||
42 | AT1G09950 | RESPONSE TO ABA AND SALT 1 | RESPONSE TO ABA AND SALT 1 | 0.61 | 0.32 | -0.32 | ||
43 | AT2G13560 | NAD-dependent malic enzyme 1 | NAD-dependent malic enzyme 1 | -0.61 | 0.32 | -0.32 | ||
44 | AT5G67450 | zinc-finger protein 1 | zinc-finger protein 1, zinc-finger protein 1 |
0.61 | 0.31 | -0.33 | ||
45 | AT1G66350 | RGA-like 1 | RGL, RGA-like 1 | -0.61 | 0.3 | -0.29 | ||
46 | AT4G17420 | Tryptophan RNA-binding attenuator protein-like | -0.61 | 0.32 | -0.31 | |||
47 | AT4G25470 | C-repeat/DRE binding factor 2 | ATCBF2, C-repeat/DRE binding factor 2, DRE/CRT-BINDING PROTEIN 1C, FREEZING TOLERANCE QTL 4 |
0.61 | 0.31 | -0.3 | ||
48 | AT3G50060 | myb domain protein 77 | myb domain protein 77 | 0.61 | 0.3 | -0.32 | ||
49 | AT4G04630 | Protein of unknown function, DUF584 | 0.61 | 0.3 | -0.32 | |||
50 | AT1G64380 | Integrase-type DNA-binding superfamily protein | 0.61 | 0.31 | -0.32 | |||
51 | AT4G36960 | RNA-binding (RRM/RBD/RNP motifs) family protein | -0.61 | 0.31 | -0.29 | |||
52 | AT4G23180 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10, RLK4 |
0.61 | 0.33 | -0.31 | ||
53 | AT5G03970 | F-box associated ubiquitination effector family protein | 0.6 | 0.31 | -0.32 | |||
54 | AT1G72240 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22470.1); Has 65 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 64; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.6 | 0.31 | -0.33 | |||
55 | AT5G49520 | WRKY DNA-binding protein 48 | ARABIDOPSIS THALIANA WRKY DNA-BINDING PROTEIN 48, WRKY DNA-binding protein 48 |
0.6 | 0.29 | -0.29 | ||
56 | AT1G22190 | Integrase-type DNA-binding superfamily protein | related to AP2 4 | 0.6 | 0.32 | -0.3 | ||
57 | AT5G18880 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein |
0.6 | 0.35 | -0.29 | |||
58 | AT4G31590 | Cellulose-synthase-like C5 | CELLULOSE-SYNTHASE LIKE C5, Cellulose-synthase-like C5, CELLULOSE-SYNTHASE LIKE C5, Cellulose-synthase-like C5 |
-0.59 | 0.32 | -0.3 | ||
59 | AT5G51190 | Integrase-type DNA-binding superfamily protein | 0.59 | 0.32 | -0.32 | |||
60 | AT3G07040 | NB-ARC domain-containing disease resistance protein | RESISTANCE TO P. SYRINGAE PV MACULICOLA 1, RESISTANCE TO PSEUDOMONAS SYRINGAE 3 |
0.59 | 0.31 | -0.34 | ||
61 | AT2G41020 | WW domain-containing protein | -0.59 | 0.31 | -0.31 | |||
62 | AT4G01290 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; Has 1744 Blast hits to 1308 proteins in 219 species: Archae - 0; Bacteria - 241; Metazoa - 793; Fungi - 253; Plants - 108; Viruses - 0; Other Eukaryotes - 349 (source: NCBI BLink). |
-0.59 | 0.3 | -0.32 | |||
63 | AT1G70520 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2 | ALTERED SEED GERMINATION 6, cysteine-rich RLK (RECEPTOR-like protein kinase) 2 |
0.59 | 0.29 | -0.31 | ||
64 | AT2G24240 | BTB/POZ domain with WD40/YVTN repeat-like protein | 0.59 | 0.31 | -0.35 | |||
65 | AT1G33760 | Integrase-type DNA-binding superfamily protein | 0.59 | 0.32 | -0.31 | |||
66 | AT1G14480 | Ankyrin repeat family protein | 0.58 | 0.31 | -0.33 | |||
67 | AT5G62770 | Protein of unknown function (DUF1645) | 0.58 | 0.33 | -0.3 | |||
68 | AT1G58230 | binding | -0.58 | 0.31 | -0.33 | |||
69 | AT4G02890 | Ubiquitin family protein | UBQ14 | -0.58 | 0.31 | -0.32 | ||
70 | AT2G01670 | nudix hydrolase homolog 17 | nudix hydrolase homolog 17, nudix hydrolase homolog 17 |
0.58 | 0.29 | -0.32 | ||
71 | AT1G60070 | Adaptor protein complex AP-1, gamma subunit | -0.57 | 0.29 | -0.32 | |||
72 | AT5G25120 | ytochrome p450, family 71, subfamily B, polypeptide 11 | ytochrome p450, family 71, subfamily B, polypeptide 11 |
0.57 | 0.32 | -0.33 | ||
73 | AT2G16670 | transposable element gene | 0.57 | 0.32 | -0.33 | |||
74 | AT1G14740 | Protein of unknown function (DUF1423) | 0.56 | 0.31 | -0.31 | |||
75 | AT5G09800 | ARM repeat superfamily protein | 0.56 | 0.3 | -0.32 | |||
76 | AT2G20790 | clathrin adaptor complexes medium subunit family protein | -0.56 | 0.32 | -0.32 | |||
77 | AT1G48050 | Ku80 family protein | ARABIDOPSIS THALIANA KU80 HOMOLOG, KU80 |
-0.56 | 0.32 | -0.33 | ||
78 | AT2G41740 | villin 2 | ATVLN2, villin 2 | -0.56 | 0.31 | -0.33 | ||
79 | AT2G27460 | sec23/sec24 transport family protein | -0.56 | 0.28 | -0.31 | |||
80 | AT1G49840 | Protein of unknown function (DUF620) | 0.56 | 0.32 | -0.3 | |||
81 | AT5G51860 | K-box region and MADS-box transcription factor family protein |
AGAMOUS-like 72 | -0.55 | 0.3 | -0.32 | ||
82 | AT3G05120 | alpha/beta-Hydrolases superfamily protein | GA INSENSITIVE DWARF1A, GA INSENSITIVE DWARF1A |
0.55 | 0.31 | -0.31 | ||
83 | AT2G05830 | NagB/RpiA/CoA transferase-like superfamily protein | -0.55 | 0.32 | -0.32 | |||
84 | AT3G60550 | cyclin p3;2 | cyclin p3;2 | 0.55 | 0.32 | -0.31 | ||
85 | AT4G27350 | Protein of unknown function (DUF1223) | 0.54 | 0.3 | -0.3 | |||
86 | AT5G16200 | 50S ribosomal protein-related | 0.54 | 0.33 | -0.31 | |||
87 | AT5G10490 | MSCS-like 2 | MSCS-like 2 | -0.54 | 0.33 | -0.31 | ||
88 | AT2G45540 | WD-40 repeat family protein / beige-related | -0.53 | 0.3 | -0.34 | |||
89 | AT1G70330 | equilibrative nucleotide transporter 1 | equilibrative nucleotide transporter 1, equilibrative nucleotide transporter 1 |
-0.53 | 0.32 | -0.31 | ||
90 | AT1G55960 | Polyketide cyclase/dehydrase and lipid transport superfamily protein |
-0.53 | 0.31 | -0.32 | |||
91 | AT1G35370 | transposable element gene | 0.53 | 0.32 | -0.32 | |||
92 | AT3G12830 | SAUR-like auxin-responsive protein family | 0.53 | 0.33 | -0.32 | |||
93 | AT1G63020 | nuclear RNA polymerase D1A | NRPD1, nuclear RNA polymerase D1A, NUCLEAR RNA POLYMERASE D 1A, SDE4, SILENCING MOVEMENT DEFICIENT 2 |
-0.53 | 0.3 | -0.32 | ||
94 | AT5G62900 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G50090.1); Has 157 Blast hits to 157 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 157; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.53 | 0.34 | -0.32 | |||
95 | AT1G14920 | GRAS family transcription factor family protein | GIBBERELLIC ACID INSENSITIVE, RESTORATION ON GROWTH ON AMMONIA 2 |
-0.53 | 0.31 | -0.3 | ||
96 | AT1G70110 | Concanavalin A-like lectin protein kinase family protein | 0.53 | 0.34 | -0.34 | |||
97 | AT5G40460 | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G27630.1); Has 87 Blast hits to 87 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 87; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
0.52 | 0.3 | -0.32 | |||
98 | AT5G18230 | transcription regulator NOT2/NOT3/NOT5 family protein | -0.52 | 0.32 | -0.3 | |||
99 | AT5G20150 | SPX domain gene 1 | ARABIDOPSIS THALIANA SPX DOMAIN GENE 1, SPX domain gene 1 |
-0.52 | 0.31 | -0.32 | ||
100 | AT5G28220 | Protein prenylyltransferase superfamily protein | -0.52 | 0.32 | -0.32 | |||
101 | AT3G01850 | Aldolase-type TIM barrel family protein | -0.52 | 0.32 | -0.29 | |||
102 | AT4G34350 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | CHLOROPLAST BIOGENESIS 6, 4-hydroxy-3-methylbut-2-enyl diphosphate reductase, ISPH |
-0.51 | 0.3 | -0.33 | ||
103 | AT1G72950 | Disease resistance protein (TIR-NBS class) | 0.51 | 0.29 | -0.31 | |||
104 | AT3G21780 | UDP-glucosyl transferase 71B6 | UDP-glucosyl transferase 71B6 | 0.51 | 0.31 | -0.32 | ||
105 | AT1G30473 | Heavy metal transport/detoxification superfamily protein | 0.51 | 0.31 | -0.29 | |||
106 | AT3G45740 | hydrolase family protein / HAD-superfamily protein | -0.51 | 0.32 | -0.33 | |||
107 | AT3G24800 | proteolysis 1 | proteolysis 1 | -0.51 | 0.33 | -0.33 | ||
108 | AT5G66640 | DA1-related protein 3 | DA1-related protein 3 | 0.51 | 0.32 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
109 | C0149 | Mevalonolactone | D,L-Mevalonolactone | - | terpenoid biosynthesis | -0.78 | 0.47 | -0.45 | ||
110 | C0110 | Guanosine | - | Guanosine | guanosine nucleotides degradation I, guanine and guanosine salvage II, guanosine nucleotides degradation II, guanine and guanosine salvage III |
-0.65 | 0.46 | -0.44 | ||
111 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
-0.64 | 0.46 | -0.44 | ||
112 | C0027 | 2-Oxoglutaric acid | - | α-Ketoglutarate | gibberellin biosynthesis III (early C-13 hydroxylation), leucopelargonidin and leucocyanidin biosynthesis, aspartate degradation II, ornithine biosynthesis, isoleucine biosynthesis I (from threonine), pantothenate biosynthesis, phenylalanine degradation III, flavonol biosynthesis, lysine biosynthesis VI, luteolin biosynthesis, ammonia assimilation cycle II, serine biosynthesis, flavonoid biosynthesis, glutamate biosynthesis V, aspartate biosynthesis, glutamate degradation I, gibberellin inactivation I (2beta-hydroxylation), alanine degradation III, photorespiration, valine biosynthesis, glycine biosynthesis, arginine biosynthesis II (acetyl cycle), arginine degradation I (arginase pathway), gibberellin biosynthesis II (early C-3 hydroxylation), leucine biosynthesis, glutamate biosynthesis IV, tyrosine biosynthesis II, proline biosynthesis III, citrulline biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), L-Ndelta-acetylornithine biosynthesis, isoleucine degradation I, alanine biosynthesis II, tyrosine biosynthesis I, TCA cycle variation III (eukaryotic), leucine degradation I, alanine degradation II (to D-lactate), TCA cycle variation V (plant), arginine degradation VI (arginase 2 pathway), valine degradation I, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), 2-ketoglutarate dehydrogenase complex, glutamate degradation IV, tyrosine degradation I, anthocyanin biosynthesis (delphinidin 3-O-glucoside), IAA biosynthesis I, phenylalanine biosynthesis II, lysine degradation II, scopoletin biosynthesis, 4-hydroxyphenylpyruvate biosynthesis, histidine biosynthesis, glutamine biosynthesis III, leucodelphinidin biosynthesis |
-0.62 | 0.46 | -0.42 | ||
113 | C0073 | Cysteine | L-Cysteine | L-Cysteine | alanine biosynthesis III, cysteine biosynthesis I, gamma-glutamyl cycle (plant pathway), farnesylcysteine salvage pathway, molybdenum cofactor biosynthesis, thiamine biosynthesis II, cyanide detoxification II, indole glucosinolate breakdown (insect chewing induced), glutathione degradation, glutathione biosynthesis, molybdenum cofactor biosynthesis II (eukaryotes), cyanide degradation, homocysteine and cysteine interconversion, methionine biosynthesis II, tRNA charging, gamma-glutamyl cycle, coenzyme A biosynthesis |
-0.59 | 0.46 | -0.44 | ||
114 | C0075 | dGDP | - | dGDP | purine nucleotide metabolism (phosphotransfer and nucleotide modification) | -0.57 | 0.42 | -0.43 | ||
115 | C0229 | Robinin | - | - | flavone biosynthesis | -0.57 | 0.43 | -0.41 | ||
116 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
-0.54 | 0.33 | -0.31 |