AT2G33845 : -
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AGICode AT2G33845
Description Nucleic acid-binding, OB-fold-like protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G33845 Nucleic acid-binding, OB-fold-like protein 1 0.33 -0.31
2 AT1G27390 translocase outer membrane 20-2 translocase outer membrane 20-2 0.84 0.31 -0.29
3 AT1G22920 COP9 signalosome 5A ARABIDOPSIS JAB1 HOMOLOG 1, COP9
signalosome 5A, JAB1
0.84 0.31 -0.29
4 AT1G14980 chaperonin 10 chaperonin 10 0.84 0.31 -0.3
5 AT1G09330 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
integral to membrane; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro
DOMAIN/s: Protein of unknown function DUF846, eukaryotic
(InterPro:IPR008564); Has 518 Blast hits to 518 proteins in
206 species: Archae - 0; Bacteria - 0; Metazoa - 193; Fungi
- 145; Plants - 73; Viruses - 0; Other Eukaryotes - 107
(source: NCBI BLink).
0.84 0.32 -0.3
6 AT1G71430 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; Has 64
Blast hits to 64 proteins in 28 species: Archae - 0;
Bacteria - 0; Metazoa - 14; Fungi - 6; Plants - 42; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink).
0.83 0.34 -0.3
7 AT4G00170 Plant VAMP (vesicle-associated membrane protein) family
protein
0.83 0.32 -0.32
8 AT2G22475 GRAM domain family protein GL2-EXPRESSION MODULATOR 0.82 0.3 -0.32
9 AT3G46830 RAB GTPase homolog A2C ARABIDOPSIS RAB GTPASE HOMOLOG
A2C, ATRAB11A, RAB GTPase homolog
A2C, RAB GTPASE HOMOLOG A2C, RAB
GTPase homolog A2C
0.82 0.32 -0.32
10 AT4G36420 Ribosomal protein L12 family protein 0.81 0.31 -0.33
11 AT5G14030 translocon-associated protein beta (TRAPB) family protein 0.81 0.3 -0.31
12 AT3G27080 translocase of outer membrane 20 kDa subunit 3 translocase of outer membrane 20
kDa subunit 3
0.81 0.31 -0.33
13 AT1G67310 Calmodulin-binding transcription activator protein with
CG-1 and Ankyrin domains
-0.81 0.32 -0.32
14 AT3G22300 ribosomal protein S10 ribosomal protein S10 0.81 0.3 -0.3
15 AT3G59650 mitochondrial ribosomal protein L51/S25/CI-B8 family
protein
0.81 0.29 -0.31
16 AT5G44130 FASCICLIN-like arabinogalactan protein 13 precursor FASCICLIN-like arabinogalactan
protein 13 precursor
0.8 0.3 -0.31
17 AT5G54970 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G26960.1); Has 1807 Blast hits
to 1807 proteins in 277 species: Archae - 0; Bacteria - 0;
Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0;
Other Eukaryotes - 339 (source: NCBI BLink).
0.8 0.31 -0.3
18 AT4G12480 Bifunctional inhibitor/lipid-transfer protein/seed storage
2S albumin superfamily protein
EARLY ARABIDOPSIS ALUMINUM INDUCED
1, pEARLI 1
0.8 0.3 -0.3
19 AT5G14040 phosphate transporter 3;1 phosphate transporter 3;1 0.8 0.31 -0.32
20 AT4G26780 Co-chaperone GrpE family protein AR192, mitochondrial GrpE 2 0.8 0.32 -0.29
21 AT5G54900 RNA-binding protein 45A RNA-binding protein 45A,
RNA-binding protein 45A
0.8 0.3 -0.33
22 AT2G46170 Reticulon family protein 0.8 0.3 -0.32
23 AT2G32380 Transmembrane protein 97, predicted 0.8 0.3 -0.32
24 AT1G77750 Ribosomal protein S13/S18 family 0.8 0.31 -0.32
25 AT4G29390 Ribosomal protein S30 family protein 0.79 0.31 -0.32
26 AT5G59880 actin depolymerizing factor 3 actin depolymerizing factor 3 0.79 0.32 -0.33
27 AT3G43810 calmodulin 7 calmodulin 7 0.79 0.32 -0.29
28 AT1G26630 Eukaryotic translation initiation factor 5A-1 (eIF-5A 1)
protein
EUKARYOTIC ELONGATION FACTOR 5A-2,
EUKARYOTIC ELONGATION FACTOR 5A-2,
FUMONISIN B1-RESISTANT12
0.79 0.31 -0.29
29 AT3G18165 modifier of snc1,4 Modifier of snc1,4 0.79 0.32 -0.32
30 AT1G04040 HAD superfamily, subfamily IIIB acid phosphatase 0.79 0.3 -0.31
31 AT2G30060 Pleckstrin homology (PH) domain superfamily protein 0.79 0.3 -0.3
32 AT1G66070 Translation initiation factor eIF3 subunit 0.78 0.32 -0.33
33 AT5G03740 histone deacetylase 2C histone deacetylase 2C, HISTONE
DEACETYLASE 3
0.78 0.33 -0.29
34 AT5G08160 serine/threonine protein kinase 3 serine/threonine protein kinase 3,
serine/threonine protein kinase 3
0.78 0.31 -0.32
35 AT1G17890 NAD(P)-binding Rossmann-fold superfamily protein GER2 0.78 0.32 -0.3
36 AT2G19540 Transducin family protein / WD-40 repeat family protein 0.78 0.32 -0.3
37 AT1G31817 Ribosomal L18p/L5e family protein NUCLEAR FUSION DEFECTIVE 3 0.78 0.32 -0.32
38 AT3G61140 26S proteasome, regulatory subunit Rpn7;Proteasome
component (PCI) domain
ARABIDOPSIS THALIANA FUSCA 6,
SHAGGY-LIKE KINASE 31,
CONSTITUTIVE PHOTOMORPHOGENIC 11,
COP9 SIGNALOSOME SUBUNIT 1, EMBRYO
DEFECTIVE 78, FUSCA 6, SHAGGY-LIKE
KINASE 31
0.78 0.33 -0.32
39 AT5G14250 Proteasome component (PCI) domain protein CONSTITUTIVE PHOTOMORPHOGENIC 13,
COP9 SIGNALOSOME SUBUNIT 3, FUSCA
11
0.78 0.3 -0.32
40 AT5G66410 phosducin-like protein 3 homolog phosducin-like protein 3 homolog 0.77 0.32 -0.32
41 AT2G43640 Signal recognition particle, SRP9/SRP14 subunit 0.77 0.31 -0.31
42 AT1G16870 mitochondrial 28S ribosomal protein S29-related 0.77 0.31 -0.31
43 AT5G59160 type one serine/threonine protein phosphatase 2 PROTOPORPHYRINOGEN OXIDASE, type
one serine/threonine protein
phosphatase 2
0.77 0.3 -0.31
44 AT3G51010 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion, plastid; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24
proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa -
0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink).
0.77 0.3 -0.31
45 AT1G23490 ADP-ribosylation factor 1 ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR,
ADP-ribosylation factor 1,
ADP-RIBOSYLATION FACTOR 1A
0.77 0.32 -0.33
46 AT4G35490 mitochondrial ribosomal protein L11 mitochondrial ribosomal protein
L11
0.76 0.32 -0.29
47 AT1G22450 cytochrome C oxidase 6B CYTOCHROME C OXIDASE 6B2,
cytochrome C oxidase 6B
0.76 0.31 -0.31
48 AT3G07950 rhomboid protein-related 0.76 0.31 -0.32
49 AT1G16000 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT1G80890.1); Has 41 Blast hits
to 40 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 41; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).
0.76 0.31 -0.31
50 AT4G09720 RAB GTPase homolog G3A RAB GTPase homolog G3A, RAB GTPase
homolog G3A
0.76 0.3 -0.32
51 AT1G02360 Chitinase family protein 0.76 0.3 -0.35
52 AT5G65270 RAB GTPase homolog A4A RAB GTPase homolog A4A, RAB GTPase
homolog A4A
0.76 0.32 -0.32
53 AT3G07230 wound-responsive protein-related 0.75 0.33 -0.32
54 AT1G19360 Nucleotide-diphospho-sugar transferase family protein reduced residual arabinose 3 0.75 0.3 -0.31
55 AT1G30000 alpha-mannosidase 3 alpha-mannosidase 3 0.75 0.35 -0.33
56 AT2G40330 PYR1-like 6 PYR1-like 6, regulatory components
of ABA receptor 9
0.75 0.31 -0.32
57 AT2G32390 glutamate receptor 3.5 glutamate receptor 3.5, glutamate
receptor 3.5, GLR6
0.75 0.31 -0.33
58 AT2G21160 Translocon-associated protein (TRAP), alpha subunit 0.75 0.3 -0.31
59 AT2G01970 Endomembrane protein 70 protein family 0.75 0.31 -0.31
60 AT3G52930 Aldolase superfamily protein 0.74 0.32 -0.32
61 AT4G29830 Transducin/WD40 repeat-like superfamily protein vernalization independence 3 0.74 0.3 -0.3
62 AT1G27340 Galactose oxidase/kelch repeat superfamily protein 0.74 0.33 -0.33
63 AT2G42710 Ribosomal protein L1p/L10e family 0.74 0.3 -0.3
64 AT5G11340 Acyl-CoA N-acyltransferases (NAT) superfamily protein 0.74 0.33 -0.31
65 AT1G49410 translocase of the outer mitochondrial membrane 6 translocase of the outer
mitochondrial membrane 6
0.74 0.32 -0.32
66 AT5G58030 Transport protein particle (TRAPP) component 0.74 0.3 -0.34
67 AT3G11800 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis
thaliana protein match is: unknown protein
(TAIR:AT3G44150.1); Has 74 Blast hits to 73 proteins in 18
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 72; Viruses - 0; Other Eukaryotes - 2 (source:
NCBI BLink).
0.74 0.3 -0.29
68 AT1G20770 unknown protein; Has 59 Blast hits to 59 proteins in 24
species: Archae - 0; Bacteria - 0; Metazoa - 26; Fungi - 4;
Plants - 29; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
0.74 0.32 -0.28
69 AT1G26340 cytochrome B5 isoform A ARABIDOPSIS CYTOCHROME B5 ISOFORM
A, B5 #6, cytochrome B5 isoform A
0.74 0.31 -0.32
70 AT1G60770 Tetratricopeptide repeat (TPR)-like superfamily protein 0.74 0.28 -0.33
71 AT1G07140 Pleckstrin homology (PH) domain superfamily protein SIRANBP 0.73 0.33 -0.32
72 AT5G07110 prenylated RAB acceptor 1.B6 prenylated RAB acceptor 1.B6 0.73 0.3 -0.33
73 AT3G48570 secE/sec61-gamma protein transport protein 0.73 0.32 -0.31
74 AT5G44370 phosphate transporter 4;6 phosphate transporter 4;6 0.73 0.3 -0.29
75 AT3G55730 myb domain protein 109 myb domain protein 109, myb domain
protein 109
0.73 0.3 -0.33
76 AT2G31110 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 40 0.73 0.31 -0.34
77 AT1G14830 DYNAMIN-like 1C DYNAMIN-like 1C, ARABIDOPSIS
DYNAMIN-LIKE PROTEIN 5,
DYNAMIN-like 1C, DYNAMIN RELATED
PROTEIN 1C
0.73 0.31 -0.32
78 AT4G31130 Protein of unknown function (DUF1218) 0.73 0.32 -0.29
79 AT3G17780 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
intracellular protein transport; LOCATED IN: endomembrane
system, integral to membrane, endoplasmic reticulum;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: B-cell
receptor-associated 31-like (InterPro:IPR008417); BEST
Arabidopsis thaliana protein match is: B-cell
receptor-associated 31-like (TAIR:AT1G48440.1); Has 102
Blast hits to 102 proteins in 17 species: Archae - 0;
Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 102; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink).
0.73 0.31 -0.33
80 AT2G26240 Transmembrane proteins 14C 0.73 0.28 -0.32
81 AT5G45310 unknown protein; LOCATED IN: endomembrane system; EXPRESSED
IN: stem, inflorescence meristem, root, leaf; EXPRESSED
DURING: LP.04 four leaves visible; Has 30201 Blast hits to
17322 proteins in 780 species: Archae - 12; Bacteria -
1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses
- 0; Other Eukaryotes - 2996 (source: NCBI BLink).
-0.73 0.32 -0.31
82 AT1G56330 secretion-associated RAS 1B SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B,
ARABIDOPSIS THALIANA
SECRETION-ASSOCIATED RAS 1B,
SECRETION-ASSOCIATED RAS 1,
secretion-associated RAS 1B
0.73 0.31 -0.32
83 AT4G39920 C-CAP/cofactor C-like domain-containing protein PORCINO, TUBULIN-FOLDING COFACTOR
C
0.73 0.32 -0.31
84 AT3G12370 Ribosomal protein L10 family protein 0.73 0.32 -0.34
85 AT2G18440 GUT15 (GENE WITH UNSTABLE TRANSCRIPT 15); other RNA GENE WITH UNSTABLE TRANSCRIPT 15 -0.71 0.31 -0.33
86 AT4G38350 Patched family protein -0.71 0.31 -0.32
87 AT2G31960 glucan synthase-like 3 glucan synthase-like 3, ATGSL3,
GSL03, glucan synthase-like 3
-0.69 0.33 -0.31
88 AT3G57300 INO80 ortholog INO80 ORTHOLOG, INO80 ortholog -0.69 0.31 -0.34
89 AT5G62090 SEUSS-like 2 SEUSS-like 2 -0.69 0.31 -0.31
90 AT5G63560 HXXXD-type acyl-transferase family protein -0.68 0.3 -0.33
91 AT5G62000 auxin response factor 2 ARF1-BINDING PROTEIN, auxin
response factor 2, HLS1
SUPPRESSOR, ORESARA 14
-0.68 0.32 -0.32
92 AT3G08020 PHD finger family protein -0.68 0.32 -0.32
93 AT5G58720 smr (Small MutS Related) domain-containing protein -0.68 0.29 -0.34
94 AT5G54280 myosin 2 myosin 2, ARABIDOPSIS THALIANA
MYOSIN 4, ARABIDOPSIS THALIANA
MYOSIN 1
-0.67 0.32 -0.3
95 AT5G62490 HVA22 homologue B ARABIDOPSIS THALIANA HVA22
HOMOLOGUE B, HVA22 homologue B
-0.67 0.32 -0.32
96 AT3G01320 SIN3-like 1 SIN3-like 1 -0.67 0.32 -0.33
97 AT5G63200 tetratricopeptide repeat (TPR)-containing protein -0.67 0.32 -0.31
98 AT1G48840 Plant protein of unknown function (DUF639) -0.67 0.31 -0.34
99 AT1G72650 TRF-like 6 TRF-like 6 -0.66 0.33 -0.33
100 AT3G22380 time for coffee TIME FOR COFFEE -0.66 0.29 -0.31
101 AT4G36980 FUNCTIONS IN: molecular_function unknown; INVOLVED IN:
biological_process unknown; EXPRESSED IN: 23 plant
structures; EXPRESSED DURING: 13 growth stages; CONTAINS
InterPro DOMAIN/s: Splicing factor, suppressor of white
apricot (InterPro:IPR019147); Has 7672 Blast hits to 5479
proteins in 321 species: Archae - 0; Bacteria - 89; Metazoa
- 5155; Fungi - 712; Plants - 341; Viruses - 39; Other
Eukaryotes - 1336 (source: NCBI BLink).
-0.66 0.31 -0.3
102 AT5G40340 Tudor/PWWP/MBT superfamily protein -0.65 0.32 -0.32
103 AT5G55390 ENHANCED DOWNY MILDEW 2 ENHANCED DOWNY MILDEW 2 -0.65 0.31 -0.33
104 AT4G33240 1-phosphatidylinositol-4-phosphate 5-kinases;zinc ion
binding;1-phosphatidylinositol-3-phosphate 5-kinases
FORMS APLOID AND BINUCLEATE CELLS
1A
-0.65 0.31 -0.31
105 ATCG00560 photosystem II reaction center protein L photosystem II reaction center
protein L
-0.65 0.31 -0.32
106 AT5G16520 unknown protein; Has 25 Blast hits to 25 proteins in 9
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.65 0.33 -0.32
107 AT2G43500 Plant regulator RWP-RK family protein -0.64 0.31 -0.3
108 AT4G34040 RING/U-box superfamily protein -0.64 0.3 -0.3
109 AT5G13690 alpha-N-acetylglucosaminidase family / NAGLU family CYCLOPS 1,
N-ACETYL-GLUCOSAMINIDASE
-0.64 0.34 -0.3
110 AT2G25890 Oleosin family protein -0.64 0.31 -0.32
111 AT5G16630 DNA repair protein Rad4 family ATRAD4, RAD4 -0.64 0.32 -0.33
112 AT5G35180 Protein of unknown function (DUF1336) -0.64 0.3 -0.33
113 AT1G23200 Plant invertase/pectin methylesterase inhibitor superfamily -0.63 0.32 -0.34
114 AT1G66140 zinc finger protein 4 zinc finger protein 4 -0.63 0.33 -0.32
115 AT4G28260 unknown protein; Has 50 Blast hits to 42 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0;
Plants - 49; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink).
-0.62 0.3 -0.31
116 AT1G22870 Protein kinase family protein with ARM repeat domain -0.61 0.31 -0.32
117 AT1G67230 little nuclei1 CROWDED NUCLEI 1, LITTLE NUCLEI1 -0.61 0.32 -0.34
118 AT2G22310 ubiquitin-specific protease 4 ubiquitin-specific protease 4,
ubiquitin-specific protease 4
-0.61 0.3 -0.31
119 AT2G46180 golgin candidate 4 golgin candidate 4 -0.61 0.32 -0.32
120 AT4G22360 SWIB complex BAF60b domain-containing protein -0.61 0.34 -0.31
121 AT5G20840 Phosphoinositide phosphatase family protein -0.61 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
122 C0123 Isoleucine D,L-Isoleucine L-Isoleucine tRNA charging,
isoleucine biosynthesis I (from threonine),
jasmonoyl-amino acid conjugates biosynthesis I,
isoleucine degradation I
-0.82 0.47 -0.45 C0123
123 C0111 Hexa-2-O-glycerol-β-galactopyranoside Hexa-2-O-gllycerol-β-D-galactopyranoside - - -0.8 0.46 -0.43
124 C0109 Guanine - Guanine guanine and guanosine salvage II,
guanosine nucleotides degradation II
-0.8 0.42 -0.48 C0109
125 C0266 Xylose D-Xylose D-Xylose xylose degradation I -0.78 0.47 -0.42 C0266
126 C0210 Phytol E-Phytol Phytol chlorophyll a degradation II,
chlorophyll a degradation,
phytol salvage pathway
-0.77 0.44 -0.45 C0210
127 C0258 Tryptophan amide (NH3+) D,L-Tryptophan amide (NH3+) - - -0.75 0.42 -0.47
128 C0107 Glycine - Glycine 5-aminoimidazole ribonucleotide biosynthesis I,
gamma-glutamyl cycle,
folate polyglutamylation,
gamma-glutamyl cycle (plant pathway),
glutathione biosynthesis,
glutathione-mediated detoxification II,
folate transformations II,
indole glucosinolate breakdown (active in intact plant cell),
glycine cleavage complex,
camalexin biosynthesis,
thiamine biosynthesis II,
tRNA charging,
glycine biosynthesis,
glutathione degradation,
photorespiration
-0.71 0.47 -0.47 C0107
129 C0056 AMP - AMP PRPP biosynthesis I,
fatty acid biosynthesis (plant mitochondria),
adenine and adenosine salvage VI,
biotin-carboxyl carrier protein assembly,
molybdenum cofactor biosynthesis II (eukaryotes),
gluconeogenesis I,
adenine and adenosine salvage II,
asparagine biosynthesis I,
L-glutamine biosynthesis II (tRNA-dependent),
trans-cinnamoyl-CoA biosynthesis,
IAA degradation V,
ethanol degradation II (cytosol),
arginine biosynthesis I,
IAA degradation IV,
fatty acid activation,
selenate reduction,
IAA biosynthesis VII,
4-hydroxybenzoate biosynthesis V,
tetrapyrrole biosynthesis I,
flavonoid biosynthesis,
indole-3-acetyl-amino acid biosynthesis,
glutamine biosynthesis III,
ethanol degradation IV (peroxisomal),
glycolysis I,
asparagine biosynthesis III (tRNA-dependent),
jasmonoyl-amino acid conjugates biosynthesis I,
molybdenum cofactor biosynthesis,
pyridine nucleotide cycling (plants),
scopoletin biosynthesis,
jasmonic acid biosynthesis,
adenosine nucleotides degradation I,
fatty acid beta-oxidation II (core pathway),
simple coumarins biosynthesis,
sulfate reduction II (assimilatory),
pantothenate biosynthesis,
sporopollenin precursor biosynthesis,
urea cycle,
thiamine biosynthesis II,
starch degradation II,
NAD biosynthesis I (from aspartate),
citrulline-nitric oxide cycle,
beta-alanine biosynthesis II,
arginine biosynthesis II (acetyl cycle),
suberin biosynthesis,
linoleate biosynthesis I (plants),
trans-zeatin biosynthesis,
tetrahydrofolate biosynthesis II,
purine nucleotides de novo biosynthesis II,
phenylpropanoid biosynthesis,
6-hydroxymethyl-dihydropterin diphosphate biosynthesis I,
purine nucleotide metabolism (phosphotransfer and nucleotide modification),
tRNA charging
-0.7 0.42 -0.42 C0056
130 C0142 Malonic acid - Malonate fatty acid biosynthesis (plant mitochondria) -0.61 0.32 -0.34 C0142