AT2G32950 : ARABIDOPSIS THALIANA CONSTITUTIVE PHOTOMORPHOGENIC 1.....
Query Information
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AGICode AT2G32950
Description Transducin/WD40 repeat-like superfamily protein
Gene information
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  Gene Code Description / Information Gene name Correlation link
pcc 2.5% 97.5% PPI
1 AT2G32950 Transducin/WD40 repeat-like superfamily protein ARABIDOPSIS THALIANA CONSTITUTIVE
PHOTOMORPHOGENIC 1, CONSTITUTIVE
PHOTOMORPHOGENIC 1, DEETIOLATED
MUTANT 340, EMBRYO DEFECTIVE 168,
FUSCA 1		 1 0.31 -0.3
2 AT5G01620 TRICHOME BIREFRINGENCE-LIKE 35 TRICHOME BIREFRINGENCE-LIKE 35 -0.75 0.3 -0.31
3 AT1G07010 Calcineurin-like metallo-phosphoesterase superfamily
protein		 AtSLP1, Shewenella-like protein
phosphatase 1		 0.73 0.29 -0.32
4 AT5G60170 RNA binding (RRM/RBD/RNP motifs) family protein 0.7 0.31 -0.32
5 AT2G26770 plectin-related stomatal closure-related actin
binding protein 1		 0.69 0.31 -0.32
6 AT1G10570 Cysteine proteinases superfamily protein OVERLY TOLERANT TO SALT 2, UB-LIKE
PROTEASE 1C		 0.68 0.31 -0.3
7 AT3G48100 response regulator 5 response regulator 5, ARABIDOPSIS
THALIANA RESPONSE REGULATOR 2,
INDUCED BY CYTOKININ 6, response
regulator 5		 -0.68 0.32 -0.29
8 AT4G00040 Chalcone and stilbene synthase family protein 0.67 0.31 -0.32
9 AT1G05200 glutamate receptor 3.4 glutamate receptor 3.4, glutamate
receptor 3.4, GLUR3		 0.67 0.3 -0.33
10 AT2G47830 Cation efflux family protein 0.67 0.33 -0.32
11 AT5G15910 NAD(P)-binding Rossmann-fold superfamily protein 0.67 0.33 -0.31
12 AT1G78510 solanesyl diphosphate synthase 1 solanesyl diphosphate synthase 1 0.67 0.33 -0.32
13 AT5G67030 zeaxanthin epoxidase (ZEP) (ABA1) ABA DEFICIENT 1, ARABIDOPSIS
THALIANA ABA DEFICIENT 1,
ARABIDOPSIS THALIANA ZEAXANTHIN
EPOXIDASE, IMPAIRED IN
BABA-INDUCED STERILITY 3, LOW
EXPRESSION OF OSMOTIC
STRESS-RESPONSIVE GENES 6,
NON-PHOTOCHEMICAL QUENCHING 2,
ZEAXANTHIN EPOXIDASE		 0.67 0.31 -0.33
14 AT5G06960 OCS-element binding factor 5 OCS-element binding factor 5,
TGACG MOTIF-BINDING FACTOR 5		 0.66 0.31 -0.31
15 AT2G36740 sequence-specific DNA binding transcription factors;DNA
binding;DNA binding		 ATSWC2, SWC2 0.66 0.31 -0.32
16 AT5G58870 FTSH protease 9 FTSH protease 9 0.66 0.32 -0.3
17 AT2G21940 shikimate kinase 1 ATSK1, shikimate kinase 1 0.66 0.31 -0.3
18 AT2G23420 nicotinate phosphoribosyltransferase 2 nicotinate
phosphoribosyltransferase 2		 0.65 0.33 -0.29
19 AT2G37120 S1FA-like DNA-binding protein -0.65 0.29 -0.32
20 AT1G69040 ACT domain repeat 4 ACT domain repeat 4 -0.65 0.32 -0.33
21 AT5G52580 RabGAP/TBC domain-containing protein 0.65 0.32 -0.35
22 AT1G24706 THO2 AtTHO2, EMBRYO DEFECTIVE 2793,
THO2		 0.65 0.3 -0.32
23 AT4G18130 phytochrome E phytochrome E 0.65 0.34 -0.31
24 AT1G73990 signal peptide peptidase signal peptide peptidase, SPPA1 0.65 0.34 -0.32
25 AT5G35180 Protein of unknown function (DUF1336) 0.65 0.33 -0.29
26 AT5G25560 CHY-type/CTCHY-type/RING-type Zinc finger protein 0.64 0.33 -0.33
27 AT4G07890 transposable element gene -0.64 0.32 -0.32
28 AT4G39560 Galactose oxidase/kelch repeat superfamily protein 0.64 0.31 -0.32
29 AT1G02300 Cysteine proteinases superfamily protein 0.63 0.32 -0.32
30 AT5G10070 RNase L inhibitor protein-related 0.63 0.31 -0.32
31 AT2G46560 transducin family protein / WD-40 repeat family protein 0.63 0.33 -0.34
32 AT2G22540 K-box region and MADS-box transcription factor family
protein 		AGAMOUS-like 22, SHORT VEGETATIVE
PHASE		 0.62 0.31 -0.32
33 AT4G03260 Outer arm dynein light chain 1 protein 0.62 0.31 -0.33
34 AT2G43850 Integrin-linked protein kinase family 0.62 0.31 -0.31
35 AT1G12910 Transducin/WD40 repeat-like superfamily protein ANTHOCYANIN11, LIGHT-REGULATED WD
1		 -0.62 0.31 -0.33
36 AT5G01780 2-oxoglutarate-dependent dioxygenase family protein 0.62 0.31 -0.32
37 AT2G25850 poly(A) polymerase 2 poly(A) polymerase 2 0.62 0.31 -0.31
38 AT5G44150 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED
DURING: 13 growth stages; Has 35333 Blast hits to 34131
proteins in 2444 species: Archae - 798; Bacteria - 22429;
Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0;
Other Eukaryotes - 9610 (source: NCBI BLink).		 0.62 0.33 -0.3
39 AT5G12970 Calcium-dependent lipid-binding (CaLB domain) plant
phosphoribosyltransferase family protein		 -0.62 0.32 -0.29
40 AT3G50870 GATA type zinc finger transcription factor family protein GATA TRANSCRIPTION FACTOR 18,
HANABA TANARU, MONOPOLE		 -0.61 0.33 -0.3
41 AT5G06100 myb domain protein 33 ATMYB33, myb domain protein 33 0.61 0.32 -0.3
42 AT2G26280 CTC-interacting domain 7 CTC-interacting domain 7 0.61 0.31 -0.29
43 AT1G54260 winged-helix DNA-binding transcription factor family
protein		 0.61 0.31 -0.33
44 AT2G46340 SPA (suppressor of phyA-105) protein family SUPPRESSOR OF PHYA-105 1 0.61 0.32 -0.32 IDA
45 AT1G32230 WWE protein-protein interaction domain protein family ARABIDOPSIS THALIANA P8
(INTERACTING PROTEIN), AtRCD1,
CEO, CEO1, RADICAL-INDUCED CELL
DEATH1		 0.61 0.31 -0.31
46 AT3G62280 GDSL-like Lipase/Acylhydrolase superfamily protein -0.6 0.31 -0.31
47 AT5G45610 protein dimerizations SENSITIVE TO UV 2 0.6 0.31 -0.31
48 AT3G26760 NAD(P)-binding Rossmann-fold superfamily protein -0.6 0.35 -0.3
49 AT5G26610 D111/G-patch domain-containing protein 0.6 0.31 -0.29
50 AT3G11670 UDP-Glycosyltransferase superfamily protein DIGALACTOSYL DIACYLGLYCEROL
DEFICIENT 1		 0.6 0.31 -0.31
51 AT3G06990 Cysteine/Histidine-rich C1 domain family protein -0.6 0.32 -0.32
52 AT1G27360 squamosa promoter-like 11 squamosa promoter-like 11 0.6 0.31 -0.32
53 AT5G54020 Cysteine/Histidine-rich C1 domain family protein -0.6 0.31 -0.31
54 AT3G26750 CONTAINS InterPro DOMAIN/s: Ubiquitin-conjugating enzyme
E2C-binding protein (InterPro:IPR019193); Has 26 Blast hits
to 25 proteins in 9 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.6 0.31 -0.35
55 AT3G07420 asparaginyl-tRNA synthetase 2 ASPARAGINYL-TRNA SYNTHETASE 2,
asparaginyl-tRNA synthetase 2,
SYNTHETASE C2, ASPARAGINYL-TRNA
SYNTHETASE 2		 0.59 0.31 -0.31
56 AT3G54500 BEST Arabidopsis thaliana protein match is: dentin
sialophosphoprotein-related (TAIR:AT5G64170.1); Has 183
Blast hits to 175 proteins in 44 species: Archae - 0;
Bacteria - 4; Metazoa - 38; Fungi - 11; Plants - 120;
Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).		 0.59 0.31 -0.32
57 AT3G58760 Integrin-linked protein kinase family 0.59 0.32 -0.3
58 AT4G31020 alpha/beta-Hydrolases superfamily protein -0.59 0.31 -0.3
59 AT3G12060 Plant protein of unknown function (DUF828) TRICHOME BIREFRINGENCE-LIKE 1 -0.59 0.32 -0.33
60 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase
family protein		 -0.59 0.31 -0.32
61 AT5G07040 RING/U-box superfamily protein -0.59 0.31 -0.31
62 AT1G29870 tRNA synthetase class II (G, H, P and S) family protein -0.59 0.32 -0.3
63 AT4G31430 unknown protein; LOCATED IN: plasma membrane; EXPRESSED IN:
25 plant structures; EXPRESSED DURING: 15 growth stages;
Has 30201 Blast hits to 17322 proteins in 780 species:
Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi -
3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996
(source: NCBI BLink).		 -0.59 0.32 -0.32
64 AT2G13370 chromatin remodeling 5 chromatin remodeling 5 0.59 0.32 -0.31
65 AT1G05280 Protein of unknown function (DUF604) -0.58 0.33 -0.29
66 AT5G19660 SITE-1 protease SITE-1 PROTEASE, ATSBT6.1, SITE-1
protease		 0.58 0.34 -0.32
67 AT3G14800 transposable element gene 0.58 0.32 -0.32
68 AT4G33630 Protein of unknown function (DUF3506) EXECUTER1 0.58 0.31 -0.34
69 AT5G24390 Ypt/Rab-GAP domain of gyp1p superfamily protein -0.57 0.31 -0.31
70 AT1G11000 Seven transmembrane MLO family protein MILDEW RESISTANCE LOCUS O 4,
MILDEW RESISTANCE LOCUS O 4		 -0.57 0.33 -0.3
71 AT1G27650 U2 snRNP auxiliary factor small subunit, putative ATU2AF35A -0.57 0.32 -0.31
72 AT5G15530 biotin carboxyl carrier protein 2 biotin carboxyl carrier protein 2,
CAC1-B		 -0.57 0.31 -0.3
73 AT1G52240 RHO guanyl-nucleotide exchange factor 11 ATROPGEF11, phytochrome
interacting RopGEF 1, RHO
guanyl-nucleotide exchange factor
11		 -0.57 0.32 -0.3
74 AT3G17920 Outer arm dynein light chain 1 protein 0.57 0.33 -0.32
75 AT2G39170 unknown protein; CONTAINS InterPro DOMAIN/s: Protein of
unknown function NEP (InterPro:IPR019320); Has 57 Blast
hits to 57 proteins in 26 species: Archae - 0; Bacteria -
0; Metazoa - 19; Fungi - 0; Plants - 34; Viruses - 0; Other
Eukaryotes - 4 (source: NCBI BLink).		 0.57 0.31 -0.32
76 AT3G14020 nuclear factor Y, subunit A6 nuclear factor Y, subunit A6 0.56 0.31 -0.34
77 AT2G27350 OTU-like cysteine protease family protein otubain-like deubiquitinase 1 0.56 0.32 -0.3
78 AT3G14075 Mono-/di-acylglycerol lipase, N-terminal;Lipase, class 3 0.56 0.32 -0.3
79 AT5G52020 Integrase-type DNA-binding superfamily protein -0.56 0.32 -0.32
80 AT1G56680 Chitinase family protein -0.56 0.34 -0.31
81 AT5G09790 ARABIDOPSIS TRITHORAX-RELATED PROTEIN 5 ARABIDOPSIS TRITHORAX-RELATED
PROTEIN 5, PIGMENT DEFECTIVE 336,
SETDOMAIN GROUP 15		 -0.55 0.31 -0.31
82 AT3G07900 O-fucosyltransferase family protein -0.55 0.32 -0.33
83 AT1G01060 Homeodomain-like superfamily protein LATE ELONGATED HYPOCOTYL, LATE
ELONGATED HYPOCOTYL 1		 0.55 0.3 -0.33
84 AT1G48690 Auxin-responsive GH3 family protein -0.55 0.33 -0.32
85 AT5G60290 unknown protein; Has 1807 Blast hits to 1807 proteins in
277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi
- 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339
(source: NCBI BLink).		 0.55 0.34 -0.32
86 AT4G26630 DEK domain-containing chromatin associated protein 0.55 0.31 -0.32
87 AT5G20070 nudix hydrolase homolog 19 ARABIDOPSIS THALIANA NUDIX
HYDROLASE HOMOLOG 19, nudix
hydrolase homolog 19, nudix
hydrolase homolog 19		 0.55 0.31 -0.31
88 AT3G06670 binding 0.55 0.32 -0.32
89 AT2G22270 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G39860.2); Has 247 Blast hits
to 231 proteins in 42 species: Archae - 0; Bacteria - 17;
Metazoa - 14; Fungi - 5; Plants - 145; Viruses - 0; Other
Eukaryotes - 66 (source: NCBI BLink).		 -0.55 0.32 -0.34
90 AT2G16780 Transducin family protein / WD-40 repeat family protein MSI02, MULTICOPY SUPPRESSOR OF
IRA1 2, NFC02,
NUCLEOSOME/CHROMATIN ASSEMBLY
FACTOR GROUP C 2		 -0.55 0.32 -0.33
91 AT5G02680 LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant
structures; EXPRESSED DURING: 13 growth stages; BEST
Arabidopsis thaliana protein match is: methionine--tRNA
ligase, putative / methionyl-tRNA synthetase, putative /
MetRS, putative (TAIR:AT4G13780.1); Has 252 Blast hits to
252 proteins in 89 species: Archae - 0; Bacteria - 71;
Metazoa - 93; Fungi - 0; Plants - 74; Viruses - 0; Other
Eukaryotes - 14 (source: NCBI BLink).		 0.55 0.3 -0.31
92 AT5G45920 SGNH hydrolase-type esterase superfamily protein -0.55 0.32 -0.28
93 AT4G32440 Plant Tudor-like RNA-binding protein 0.55 0.34 -0.32
94 AT4G11780 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT4G23020.2); Has 550 Blast hits
to 387 proteins in 92 species: Archae - 0; Bacteria - 32;
Metazoa - 132; Fungi - 122; Plants - 80; Viruses - 0; Other
Eukaryotes - 184 (source: NCBI BLink).		 -0.55 0.32 -0.3
95 AT3G24820 BSD domain-containing protein 0.55 0.32 -0.31
96 AT1G15220 cytochrome c biogenesis protein family ATCCMH, CCMH -0.54 0.29 -0.31
97 AT1G07170 PHF5-like protein -0.54 0.34 -0.32
98 AT5G58580 TOXICOS EN LEVADURA 63 TOXICOS EN LEVADURA 63, TOXICOS EN
LEVADURA 63		 -0.54 0.32 -0.31
99 AT2G42930 Carbohydrate-binding X8 domain superfamily protein -0.54 0.3 -0.31
100 AT4G16400 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT3G13175.1); Has 30201 Blast
hits to 17322 proteins in 780 species: Archae - 12;
Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants -
5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink).		 -0.54 0.32 -0.3
101 AT5G04470 cyclin-dependent protein kinase inhibitors SIAMESE -0.54 0.32 -0.33
102 AT1G29180 Cysteine/Histidine-rich C1 domain family protein -0.54 0.32 -0.32
103 AT5G40250 RING/U-box superfamily protein -0.53 0.32 -0.29
104 AT2G17370 3-hydroxy-3-methylglutaryl-CoA reductase 2 3-hydroxy-3-methylglutaryl-CoA
reductase 2,
3-HYDROXY-3-METHYLGLUTARYL-COENZYM
E A REDUCTASE 2		 -0.53 0.3 -0.32
105 AT3G50300 HXXXD-type acyl-transferase family protein -0.53 0.32 -0.3
106 AT3G47400 Plant invertase/pectin methylesterase inhibitor superfamily -0.53 0.29 -0.33
107 AT5G12940 Leucine-rich repeat (LRR) family protein -0.53 0.33 -0.32
108 AT5G04770 cationic amino acid transporter 6 ARABIDOPSIS THALIANA CATIONIC
AMINO ACID TRANSPORTER 6, cationic
amino acid transporter 6		 -0.53 0.3 -0.33
109 AT5G57770 Plant protein of unknown function (DUF828) with plant
pleckstrin homology-like region		 -0.52 0.31 -0.33
110 AT1G73510 unknown protein; Has 7 Blast hits to 7 proteins in 2
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0;
Plants - 7; Viruses - 0; Other Eukaryotes - 0 (source: NCBI
BLink).		 -0.52 0.3 -0.32
111 AT3G50640 unknown protein; BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G66800.1); Has 67 Blast hits
to 67 proteins in 10 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink).		 -0.52 0.32 -0.31
112 AT1G13190 RNA-binding (RRM/RBD/RNP motifs) family protein -0.52 0.32 -0.32
113 AT1G45130 beta-galactosidase 5 beta-galactosidase 5 -0.51 0.31 -0.3
114 AT4G20140 Leucine-rich repeat transmembrane protein kinase GASSHO1 -0.51 0.32 -0.3
115 AT4G19980 unknown protein; FUNCTIONS IN: molecular_function unknown;
INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: root, pedicel; EXPRESSED DURING:
4 anthesis; Has 30201 Blast hits to 17322 proteins in 780
species: Archae - 12; Bacteria - 1396; Metazoa - 17338;
Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes
- 2996 (source: NCBI BLink).		 -0.51 0.31 -0.32
Metabolite information
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  CID Metabolite name Pathway Information Correlation link
Compound name Stereochemistry Aracyc name pcc 2.5% 97.5% PPI
116 C0110 Guanosine - Guanosine guanosine nucleotides degradation I,
guanine and guanosine salvage II,
guanosine nucleotides degradation II,
guanine and guanosine salvage III 		0.76 0.43 -0.46 C0110
117 C0187 Neoeriocitrin - - - -0.59 0.43 -0.46