ID | C0014 |
Compound name | O-Acetylserine |
External link | http://pmn.plantcyc.org/ARA/NEW-IMAGE?type=COMPOUND&object=ACETYLSERINE |
Pathway Information | cysteine biosynthesis I, seleno-amino acid biosynthesis |
Gene Code | Description / Information | Gene name | Correlation | link | ||||
---|---|---|---|---|---|---|---|---|
pcc | 2.5% | 97.5% | PPI | |||||
1 | AT5G52430 | hydroxyproline-rich glycoprotein family protein | 0.81 | 0.34 | -0.3 | |||
2 | AT3G10730 | SAD1/UNC-84 domain protein 2 | ARABIDOPSIS SAD1/UNC-84 DOMAIN PROTEIN 2, SAD1/UNC-84 domain protein 2 |
-0.77 | 0.33 | -0.28 | ||
3 | AT5G40210 | nodulin MtN21 /EamA-like transporter family protein | 0.77 | 0.34 | -0.33 | |||
4 | AT3G14205 | Phosphoinositide phosphatase family protein | 0.76 | 0.31 | -0.32 | |||
5 | AT1G03080 | kinase interacting (KIP1-like) family protein | 0.75 | 0.32 | -0.3 | |||
6 | AT3G56200 | Transmembrane amino acid transporter family protein | 0.75 | 0.31 | -0.34 | |||
7 | AT5G64900 | precursor of peptide 1 | ARABIDOPSIS THALIANA PEPTIDE 1, PEPTIDE 1, precursor of peptide 1 |
0.74 | 0.29 | -0.31 | ||
8 | AT5G52890 | AT hook motif-containing protein | -0.74 | 0.31 | -0.32 | |||
9 | AT4G11370 | RING-H2 finger A1A | RING-H2 finger A1A | 0.74 | 0.33 | -0.31 | ||
10 | AT1G61580 | R-protein L3 B | ARABIDOPSIS RIBOSOMAL PROTEIN 2, R-protein L3 B |
-0.73 | 0.32 | -0.33 | ||
11 | AT3G52580 | Ribosomal protein S11 family protein | -0.73 | 0.33 | -0.33 | |||
12 | AT3G22960 | Pyruvate kinase family protein | PKP-ALPHA, PLASTIDIAL PYRUVATE KINASE 1 |
-0.73 | 0.33 | -0.33 | ||
13 | AT5G14610 | DEAD box RNA helicase family protein | -0.72 | 0.33 | -0.33 | |||
14 | AT1G02640 | beta-xylosidase 2 | BETA-XYLOSIDASE 2, beta-xylosidase 2 |
-0.72 | 0.3 | -0.32 | ||
15 | AT2G27130 | Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein |
-0.72 | 0.31 | -0.33 | |||
16 | AT1G34260 | FORMS APLOID AND BINUCLEATE CELLS 1A | FORMS APLOID AND BINUCLEATE CELLS 1A |
0.71 | 0.31 | -0.32 | ||
17 | AT5G17450 | Heavy metal transport/detoxification superfamily protein | heavy metal associated isoprenylated plant protein 21 |
0.71 | 0.3 | -0.29 | ||
18 | AT3G48425 | DNAse I-like superfamily protein | -0.71 | 0.31 | -0.3 | |||
19 | AT4G30130 | Protein of unknown function (DUF630 and DUF632) | -0.71 | 0.32 | -0.31 | |||
20 | AT4G15000 | Ribosomal L27e protein family | -0.71 | 0.32 | -0.31 | |||
21 | AT3G11400 | eukaryotic translation initiation factor 3G1 | ATEIF3G1, eukaryotic translation initiation factor 3G1 |
-0.71 | 0.33 | -0.31 | ||
22 | AT4G04610 | APS reductase 1 | APR, APS reductase 1, ATAPR1, PAPS REDUCTASE HOMOLOG 19 |
0.71 | 0.33 | -0.32 | ||
23 | AT2G26380 | Leucine-rich repeat (LRR) family protein | 0.71 | 0.33 | -0.33 | |||
24 | AT4G21470 | riboflavin kinase/FMN hydrolase | riboflavin kinase/FMN hydrolase, riboflavin kinase/FMN hydrolase |
0.71 | 0.31 | -0.31 | ||
25 | AT1G59560 | E3 Ubiquitin ligase family protein | DIAP1-like protein 2, ZCF61 | -0.71 | 0.32 | -0.33 | ||
26 | AT1G16920 | RAB GTPase homolog A1B | RAB GTPase homolog A1B, RAB11, RAB GTPase homolog A1B |
-0.7 | 0.33 | -0.34 | ||
27 | AT5G66750 | chromatin remodeling 1 | ATDDM1, CHA1, CHROMATIN REMODELING 1, chromatin remodeling 1, DECREASED DNA METHYLATION 1, SOMNIFEROUS 1, SOM4 |
-0.7 | 0.3 | -0.32 | ||
28 | AT5G35530 | Ribosomal protein S3 family protein | -0.7 | 0.32 | -0.33 | |||
29 | AT3G02080 | Ribosomal protein S19e family protein | -0.7 | 0.32 | -0.34 | |||
30 | AT5G10360 | Ribosomal protein S6e | embryo defective 3010, Ribosomal protein small subunit 6b |
-0.7 | 0.32 | -0.34 | ||
31 | AT3G23710 | Tic22-like family protein | translocon at the inner envelope membrane of chloroplasts 22-III, translocon at the inner envelope membrane of chloroplasts 22-III |
-0.7 | 0.31 | -0.31 | ||
32 | AT1G77260 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein |
0.7 | 0.31 | -0.32 | |||
33 | AT3G49430 | SER/ARG-rich protein 34A | Serine/Arginine-Rich Protein Splicing Factor 34a, Serine/Arginine-Rich Protein Splicing Factor 34a, SER/ARG-rich protein 34A |
-0.69 | 0.31 | -0.34 | ||
34 | AT1G24360 | NAD(P)-binding Rossmann-fold superfamily protein | -0.69 | 0.31 | -0.32 | |||
35 | AT1G67430 | Ribosomal protein L22p/L17e family protein | -0.69 | 0.32 | -0.3 | |||
36 | AT5G20920 | eukaryotic translation initiation factor 2 beta subunit | eukaryotic translation initiation factor 2 beta subunit, embryo defective 1401 |
-0.69 | 0.31 | -0.34 | ||
37 | AT5G67210 | Protein of unknown function (DUF579) | IRX15-LIKE | 0.69 | 0.31 | -0.32 | ||
38 | AT5G64510 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 10 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
tunicamycin induced 1 | 0.69 | 0.3 | -0.32 | ||
39 | AT2G21580 | Ribosomal protein S25 family protein | -0.69 | 0.33 | -0.31 | |||
40 | AT1G15250 | Zinc-binding ribosomal protein family protein | -0.69 | 0.31 | -0.32 | |||
41 | AT3G06660 | PAPA-1-like family protein / zinc finger (HIT type) family protein |
-0.69 | 0.31 | -0.34 | |||
42 | AT3G02790 | zinc finger (C2H2 type) family protein | -0.69 | 0.31 | -0.34 | |||
43 | AT5G49130 | MATE efflux family protein | 0.69 | 0.31 | -0.33 | |||
44 | AT1G36370 | serine hydroxymethyltransferase 7 | serine hydroxymethyltransferase 7 | 0.69 | 0.32 | -0.29 | ||
45 | AT5G06670 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
-0.68 | 0.3 | -0.33 | |||
46 | AT1G60940 | SNF1-related protein kinase 2.10 | SUCROSE NONFERMENTING 1-RELATED PROTEIN KINASE 2-10, SNF1-related protein kinase 2.10, SNF1-RELATED KINASE 2B |
0.68 | 0.33 | -0.34 | ||
47 | AT3G53430 | Ribosomal protein L11 family protein | -0.68 | 0.33 | -0.31 | |||
48 | AT3G05560 | Ribosomal L22e protein family | -0.68 | 0.32 | -0.33 | |||
49 | AT5G46700 | Tetraspanin family protein | TETRASPANIN 1, TORNADO 2 | -0.68 | 0.31 | -0.3 | ||
50 | AT5G02540 | NAD(P)-binding Rossmann-fold superfamily protein | -0.68 | 0.31 | -0.34 | |||
51 | AT1G70310 | spermidine synthase 2 | spermidine synthase 2 | -0.68 | 0.31 | -0.3 | ||
52 | AT2G27530 | Ribosomal protein L1p/L10e family | PIGGYBACK1 | -0.68 | 0.3 | -0.32 | ||
53 | AT1G13380 | Protein of unknown function (DUF1218) | -0.68 | 0.33 | -0.32 | |||
54 | AT5G58670 | phospholipase C1 | ARABIDOPSIS THALIANA PHOSPHOLIPASE C, phospholipase C1, phospholipase C 1, phospholipase C1 |
0.68 | 0.31 | -0.33 | ||
55 | AT3G04650 | FAD/NAD(P)-binding oxidoreductase family protein | -0.68 | 0.31 | -0.32 | |||
56 | AT1G69610 | Protein of unknown function (DUF1666) | 0.67 | 0.33 | -0.33 | |||
57 | AT3G50070 | CYCLIN D3;3 | CYCLIN D3;3 | -0.67 | 0.3 | -0.33 | ||
58 | AT5G15200 | Ribosomal protein S4 | -0.67 | 0.33 | -0.3 | |||
59 | AT2G27970 | CDK-subunit 2 | CDK-subunit 2 | -0.67 | 0.33 | -0.32 | ||
60 | AT5G13960 | SU(VAR)3-9 homolog 4 | KRYPTONITE, SET DOMAIN PROTEIN 33, SU(VAR)3-9 homolog 4 |
-0.67 | 0.31 | -0.32 |
CID | Metabolite name | Pathway Information | Correlation | link | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Compound name | Stereochemistry | Aracyc name | pcc | 2.5% | 97.5% | PPI | ||||
61 | C0014 | O-Acetylserine | O-Acetyl-L-serine | O-Acetyl-L-serine | cysteine biosynthesis I, seleno-amino acid biosynthesis |
1 | 0.31 | -0.31 | ||
62 | C0257 | Tryptophan | L-Tryptophan | L-Tryptophan | glucosinolate biosynthesis from tryptophan, IAA biosynthesis I, tryptophan biosynthesis, camalexin biosynthesis, tRNA charging |
0.86 | 0.3 | -0.32 | ||
63 | C0026 | 2-Hydroxyisobutyric acid | - | - | β oxidation | 0.83 | 0.43 | -0.46 | ||
64 | C0054 | Agmatine | - | Agmatine | putrescine biosynthesis I, putrescine biosynthesis II, superpathway of polyamine biosynthesis |
0.81 | 0.33 | -0.32 | ||
65 | C0260 | Tyrosine | L-(-)-Tyrosine | L-Tyrosine | tyrosine biosynthesis II, 4-hydroxyphenylpyruvate biosynthesis, tyrosine degradation I, tyrosine biosynthesis I, tRNA charging, hydroxycinnamic acid tyramine amides biosynthesis |
0.81 | 0.32 | -0.3 | ||
66 | C0220 | Pyruvic acid | - | Pyruvate | sucrose degradation to ethanol and lactate (anaerobic), alanine degradation II (to D-lactate), alanine degradation III, glutamine biosynthesis III, pyruvate fermentation to ethanol II, serine racemization, methylerythritol phosphate pathway, 1,4-dihydroxy-2-naphthoate biosynthesis II (plants), valine biosynthesis, seleno-amino acid biosynthesis, phenylalanine degradation III, an electron-transfer-related quinone + D-lactate -> an electron-transfer-related quinol + pyruvate, tetrahydrofolate biosynthesis II, methylglyoxal degradation I, glycolysis I, tryptophan biosynthesis, salicylate biosynthesis I, pyruvate fermentation to lactate, methionine biosynthesis II, glutathione-mediated detoxification II, IAA biosynthesis I, TCA cycle variation V (plant), Rubisco shunt, gluconeogenesis I, acetaldehyde biosynthesis I, homocysteine and cysteine interconversion, glycolysis IV (plant cytosol), 4-aminobutyrate degradation IV, beta-alanine biosynthesis II, isoleucine biosynthesis I (from threonine), glutamate degradation IV, lysine biosynthesis VI, acetyl-CoA biosynthesis (from pyruvate), alanine biosynthesis II |
0.81 | 0.46 | -0.44 | ||
67 | C0243 | Succinic acid | - | Succinate | flavonol biosynthesis, glyoxylate cycle, gibberellin biosynthesis III (early C-13 hydroxylation), TCA cycle variation V (plant), TCA cycle variation III (eukaryotic), aerobic respiration (alternative oxidase pathway), gibberellin inactivation I (2beta-hydroxylation), 4-aminobutyrate degradation IV, luteolin biosynthesis, anthocyanin biosynthesis (delphinidin 3-O-glucoside), leucodelphinidin biosynthesis, glutamate degradation IV, gibberellin biosynthesis I (non C-3, non C-13 hydroxylation), succinate + a ubiquinone -> a ubiquinol + fumarate, gibberellin biosynthesis II (early C-3 hydroxylation), flavonoid biosynthesis, superpathway of glyoxylate cycle and fatty acid degradation, aerobic respiration (cytochrome c), leucopelargonidin and leucocyanidin biosynthesis, anthocyanin biosynthesis (pelargonidin 3-O-glucoside, cyanidin 3-O-glucoside), scopoletin biosynthesis |
0.78 | 0.31 | -0.32 | ||
68 | C0091 | Fructose-1,6-bisphosphate | D-Fructose-1,6-bisphosphate | Fructose-1,6-bisphosphate | gluconeogenesis I, Calvin-Benson-Bassham cycle, glycolysis IV (plant cytosol), glycolysis I, CA1P biosynthesis, sucrose biosynthesis I |
0.71 | 0.44 | -0.44 |